FFCP PHASE1:Hg19::chr8:8559406..8559465,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17591 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000519106_5end | |||
|description=CAGE_peak_1_at_CLDN23_5end | |||
|id=chr8:8559406..8559465,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.80e-19!63;CL:0000576!2.80e-19!63;CL:0000040!2.80e-19!63;CL:0000559!2.80e-19!63;CL:0000839!6.17e-19!70;CL:0000557!7.98e-19!71;CL:0002009!2.62e-18!65;CL:0000766!1.34e-16!76;CL:0002057!1.37e-14!42;CL:0000860!5.50e-14!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.60e-18;39!CL:0000234;2.60e-18;39!CL:0000860;1.72e-17;33!CL:0002057;1.72e-17;33!CL:0000576;2.29e-12;48!CL:0000766;1.75e-08;69!CL:1000507;6.42e-08;10!CL:1000494;6.42e-08;10!CL:1000449;8.69e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.17e-22,59;CL:0000576,1.17e-22,59;CL:0000040,1.17e-22,59;CL:0000559,1.17e-22,59;CL:0000839,1.85e-22,66;CL:0000557,8.96e-22,67;CL:0002009,3.39e-21,61;CL:0000473,1.41e-19,48;CL:0000234,1.41e-19,48;CL:0000766,1.46e-19,72;CL:0000860,1.13e-15,42;CL:0002057,1.13e-15,42;CL:1000507,4.51e-08,10;CL:1000494,4.51e-08,10;CL:0000763,4.25e-07,108;CL:0000049,4.25e-07,108;CL:1000449,7.97e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.38e-19!80;UBERON:0000062!1.15e-17!511;UBERON:0004765!1.69e-17!101;UBERON:0001434!1.69e-17!101;UBERON:0001474!3.83e-16!86;UBERON:0002405!1.17e-14!115;UBERON:0000926!2.13e-13!448;UBERON:0004120!2.13e-13!448;UBERON:0006603!2.13e-13!448;UBERON:0000468!5.44e-13!659;UBERON:0000922!2.13e-12!612;UBERON:0004119!2.98e-12!169;UBERON:0000925!2.98e-12!169;UBERON:0006595!2.98e-12!169;UBERON:0002390!8.15e-12!102;UBERON:0003061!8.15e-12!102;UBERON:0002050!5.29e-11!605;UBERON:0005423!5.29e-11!605;UBERON:0000923!7.00e-11!604;UBERON:0005291!7.00e-11!604;UBERON:0006598!7.00e-11!604;UBERON:0002532!7.00e-11!604;UBERON:0002193!1.73e-10!112;UBERON:0001007!2.20e-10!155;UBERON:0001555!2.20e-10!155;UBERON:0007026!2.20e-10!155;UBERON:0000467!3.14e-10!625;UBERON:0000480!5.27e-10!626;UBERON:0002204!7.51e-09!167;UBERON:0004921!1.53e-08!129;UBERON:0004185!1.53e-08!129;UBERON:0000077!3.22e-08!130;UBERON:0003064!6.01e-08!37;UBERON:0001008!1.46e-07!45;UBERON:0006554!2.83e-07!44;UBERON:0000466!3.55e-07!126;UBERON:0000161!5.03e-07!35;UBERON:0000464!9.40e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.42e-08;10!UBERON:0009773;6.42e-08;10!UBERON:0001231;6.42e-08;10!UBERON:0004810;6.42e-08;10!UBERON:0006555;8.69e-07;15!UBERON:0004819;8.69e-07;15!UBERON:0001285;8.69e-07;15!UBERON:0007684;8.69e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-21,76;UBERON:0004765,6.86e-20,90;UBERON:0001434,2.69e-19,100;UBERON:0001474,5.68e-18,82;UBERON:0002405,1.41e-15,93;UBERON:0002390,2.21e-12,98;UBERON:0003061,2.21e-12,98;UBERON:0004119,2.28e-11,160;UBERON:0000925,2.28e-11,160;UBERON:0006595,2.28e-11,160;UBERON:0002193,2.38e-10,108;UBERON:0002204,1.70e-09,167;UBERON:0001007,5.90e-09,145;UBERON:0001555,5.90e-09,145;UBERON:0007026,5.90e-09,145;UBERON:0001008,1.20e-08,48;UBERON:0000922,2.53e-08,592;UBERON:0006554,2.65e-08,47;UBERON:0004810,4.51e-08,10;UBERON:0005423,1.27e-07,581;UBERON:0006555,2.51e-07,16;UBERON:0004819,2.51e-07,16;UBERON:0004921,3.99e-07,118;UBERON:0004211,7.97e-07,15;UBERON:0009773,7.97e-07,15;UBERON:0001231,7.97e-07,15;UBERON:0001285,7.97e-07,15;UBERON:0007684,7.97e-07,15;UBERON:0004208,7.97e-07,15 | |||
|phase1_expression=1.63510541343501,7.06531728840244,1.12763523276777,4.00293193412522,3.5756887554183,0,2.53299878168311,2.52687949370732,15.6711376919903,3.93174298402414,11.8626198555313,2.62129646556207,4.22027165165526,2.59909341216098,2.31978163009541,0,0,0,0,0.369363174230364,0.408001382488506,0.626909442956176,3.14859585844162,3.42186062682211,3.01302335027527,0.229240217243854,0.0821005894499457,0.0787107813136792,0.786728553697808,0.383829398097213,2.32224184974114,0.919421224478927,0.6024118375565,0.739508020333575,3.48602402611357,0.142169232487422,0.293600439334847,2.76997704265939,2.80762226458198,0,16.5697450937544,8.42123531649347,9.5302960024649,5.67053131240302,7.17964293008738,1.4555043671269,4.41615170120801,4.93401465626191,2.16794459626573,7.48000220037591,6.66017836975662,3.54723344832878,14.1345729102014,9.68227025375739,8.12558919566051,4.89430082810772,5.45812300115692,1.57306439111559,16.2224462956578,8.02322567690234,8.95071976118658,5.60747210317417,8.37747362010854,3.40979800426155,7.83564944297177,6.80862269629368,4.9825779919646,9.2962006144995,8.86520961314342,3.9093992046921,10.2917915447673,6.99727508376373,4.74693581161327,1.05627643155971,0.850417199860174,1.46761051855863,1.79725809834392,1.65194582125657,1.28580469357664,0.855038231223746,0.99458338599545,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0,4.87613732627923,0,0.383587685530591,3.61439152384566,5.51471701699479,13.4707262633566,0.795285947051099,3.89307896242109,0.189069634328136,0,0,2.88153966094968,1.45718115317017,0,8.43823223502177,7.66170844116776,12.0991744072167,0.953962497221368,0,1.11437250398869,0,0,1.04142150482278,0,0.419499436209906,0.825354125820202,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0.67355336034844,0,0.151357427644931,0,0.937285727335186,0,0,0.149448680551801,0,0,0,1.02077085627447,2.08818339430006,6.09622108937016,5.94001428641027,4.20353779773547,0,0.718618141816238,1.0100166837244,0.750711119231785,0.277064115484183,3.07284334616587,0.919463387397059,5.10809400282429,0,0,0.213557388818567,0.211931901159562,0.600182192168805,0,0.772921620136887,0.37223371266318,0.337552664482532,0.779496041289589,0,0.184099797284599,3.71785930683267,0,0.403008392910561,0.169560592310488,3.47869535693934,1.90922284413584,1.14721838155602,1.82960559194393,2.12047629314376,1.74290914304278,2.28054321033815,1.51392510525377,1.45990943630332,0,0,0,0,0.721879481669586,2.12952240071719,1.51726221070292,1.92808823906786,1.43382164552112,2.17879444092406,1.18635309555548,0.943819157121151,1.76599318612811,0.769494313892781,0.738155454624648,0,0,0,5.07020139287323,9.82827216677626,8.86184860022106,0,6.02643348861256,0.171567810298526,0.548751427043128,1.1240175325762,0.100528972411631,0.0925884451585296,3.58389135841357,4.15973914111831,1.44331342025273,0.463721619900307,0.117408694235822,0.866198686566443,0.925971025153221,0.761016608938393,3.95102198979638,2.57545848628462,15.2654543774186,17.7843241505821,17.0925836632037,1.87467667973554,3.02367830757947,1.13420077793909,0.985143749731331,0.290633938513962,1.15014803749563,0.492663237895943,3.16974362447614,3.52457796419313,3.747118788841,6.43836410474538,0.317489471460845,2.67391897890794,5.86087236050235,3.4214489204541,1.13110241973656,0,0.285826432630578,0.336393253036082,0,0.22001485746285,0.129271715757778,17.8828222925941,0.845302752556,0,0,0.771622122786426,2.83698264046557,1.3321108950805,1.14382394926518,8.13932408087165,3.29296134712308,1.30294473717494,1.42156779497018,2.37585561880029,0.301439377059586,0,0.099972991182057,12.162378064119,5.02257091432126,2.10833939483032,0.239624855491583,0,0,0.289562613335158,1.02738161275192,0.358121926479791,0.448340575974109,0,0,0.128343036279748,1.52456774533478,0,0,1.67516265334349,0,0,0,0,3.18997878469764,1.50051156317903,1.35632511849868,0.623912584592421,0.892144943985809,0.157702415033935,0.234282829985426,0,4.5481500811197,3.10419213877515,0,0.184369168541703,1.91143951829782,0.783204629850962,0.686286847621712,0.206768026122887,0.215714200818617,0.533637789017222,1.81876542867756,1.66435439510497,3.62868351995616,0,0,0.561320188866147,0.512556597022804,2.04682899626681,0.482561763430822,0,1.23367755042124,0.532685175939381,0.657017248110473,0,1.39452454151951,3.14234568938218,0.802025881213139,1.38121483403844,4.93702127107809,0.546273504020151,14.8170588904149,11.7311899355927,5.08301224889137,7.84349769176855,11.6911379722609,4.85537492907228,1.13733384070897,0.170093705276516,1.51141141271498,0,1.89662506280697,5.51858751240339,11.9791848331168,15.7904441696458,7.16399215110971,0,0,1.79515087581472,0.984043937099117,1.952270367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| |||
|short_description=p1@CLDN23 | |||
}} |
Revision as of 20:34, 22 January 2014
Short description: | p1@CLDN23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000519106_5end |
EntrezGene: | CLDN23 |
HGNC: | 17591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.17e-22 | 59 |
monocyte | 1.17e-22 | 59 |
monoblast | 1.17e-22 | 59 |
promonocyte | 1.17e-22 | 59 |
myeloid lineage restricted progenitor cell | 1.85e-22 | 66 |
granulocyte monocyte progenitor cell | 8.96e-22 | 67 |
macrophage dendritic cell progenitor | 3.39e-21 | 61 |
defensive cell | 1.41e-19 | 48 |
phagocyte | 1.41e-19 | 48 |
myeloid leukocyte | 1.46e-19 | 72 |
classical monocyte | 1.13e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-15 | 42 |
kidney tubule cell | 4.51e-08 | 10 |
nephron tubule epithelial cell | 4.51e-08 | 10 |
myeloid cell | 4.25e-07 | 108 |
common myeloid progenitor | 4.25e-07 | 108 |
epithelial cell of nephron | 7.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-21 | 76 |
skeletal element | 6.86e-20 | 90 |
skeletal system | 2.69e-19 | 100 |
bone element | 5.68e-18 | 82 |
immune system | 1.41e-15 | 93 |
hematopoietic system | 2.21e-12 | 98 |
blood island | 2.21e-12 | 98 |
endoderm-derived structure | 2.28e-11 | 160 |
endoderm | 2.28e-11 | 160 |
presumptive endoderm | 2.28e-11 | 160 |
hemolymphoid system | 2.38e-10 | 108 |
musculoskeletal system | 1.70e-09 | 167 |
digestive system | 5.90e-09 | 145 |
digestive tract | 5.90e-09 | 145 |
primitive gut | 5.90e-09 | 145 |
renal system | 1.20e-08 | 48 |
embryo | 2.53e-08 | 592 |
urinary system structure | 2.65e-08 | 47 |
nephron tubule epithelium | 4.51e-08 | 10 |
developing anatomical structure | 1.27e-07 | 581 |
excretory tube | 2.51e-07 | 16 |
kidney epithelium | 2.51e-07 | 16 |
subdivision of digestive tract | 3.99e-07 | 118 |
nephron epithelium | 7.97e-07 | 15 |
renal tubule | 7.97e-07 | 15 |
nephron tubule | 7.97e-07 | 15 |
nephron | 7.97e-07 | 15 |
uriniferous tubule | 7.97e-07 | 15 |
nephrogenic mesenchyme | 7.97e-07 | 15 |