FFCP PHASE1:Hg19::chr8:42042654..42042665,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9051 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENST00000524261_5end | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_9_at_PLAT_5end | |||
|id=chr8:42042654..42042665,- | |||
|ontology_enrichment_celltype=CL:0000183!2.20e-20!59;CL:0000680!5.57e-20!57;CL:0000056!5.57e-20!57;CL:0000355!5.57e-20!57;CL:0000192!2.57e-19!42;CL:0000514!2.57e-19!42;CL:0000187!2.30e-18!54;CL:0000393!1.14e-15!60;CL:0000211!1.14e-15!60;CL:0000055!1.15e-14!180;CL:0000359!6.08e-13!32;CL:0002539!2.50e-11!10;CL:0000222!5.40e-10!119;CL:0000220!1.04e-07!246;CL:0002321!1.54e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.81e-24;32!CL:0002593;3.83e-21;2!CL:0000192;4.31e-20;43!CL:0002595;9.39e-19;5!CL:0002539;7.20e-16;10!CL:0002591;1.18e-11;1!CL:0002379;1.87e-11;1!CL:0002616;4.01e-11;1!CL:0000187;2.26e-10;55!CL:0000393;5.08e-08;61!CL:0000211;5.08e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.52e-26,43;CL:0000514,3.52e-26,43;CL:0000359,5.94e-24,32;CL:0002593,4.25e-21,2;CL:0000187,3.94e-20,55;CL:0000680,5.23e-19,58;CL:0000056,5.23e-19,58;CL:0000355,5.23e-19,58;CL:0002595,9.12e-19,5;CL:0000393,5.38e-18,61;CL:0000211,5.38e-18,61;CL:0002539,8.75e-16,10;CL:0002591,1.06e-11,1;CL:0002379,1.97e-11,1;CL:0002616,2.96e-11,1;CL:0000222,2.90e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.31e-20;43!CL:0000355;1.07e-10;58!UBERON:0005795;6.68e-10;10 | |||
|ontology_enrichment_disease=DOID:0060084!3.77e-07!3;DOID:127!3.77e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.30e-31;3!DOID:127;1.30e-31;3!DOID:0060072;6.90e-24;4!DOID:3620;1.87e-11;1!DOID:3565;1.87e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.30e-31,3;DOID:127,1.30e-31,3;DOID:0060072,6.91e-24,4;DOID:3620,1.97e-11,1;DOID:3565,1.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.66e-18!61;UBERON:0002036!4.66e-18!61;UBERON:0003082!4.66e-18!61;UBERON:0002385!3.43e-17!63;UBERON:0001015!3.43e-17!63;UBERON:0000383!3.43e-17!63;UBERON:0004290!4.60e-17!70;UBERON:0000914!5.49e-15!83;UBERON:0002329!5.49e-15!83;UBERON:0003077!5.49e-15!83;UBERON:0003059!5.49e-15!83;UBERON:0007282!5.49e-15!83;UBERON:0009618!5.49e-15!83;UBERON:0007285!5.49e-15!83;UBERON:0000486!3.14e-14!82;UBERON:0005256!5.64e-14!143;UBERON:0001135!1.61e-13!15;UBERON:0001637!1.39e-12!42;UBERON:0003509!1.39e-12!42;UBERON:0004572!1.39e-12!42;UBERON:0004573!1.99e-12!33;UBERON:0004571!1.99e-12!33;UBERON:0000490!2.75e-12!138;UBERON:0004237!2.50e-11!10;UBERON:0004695!2.50e-11!10;UBERON:0002111!2.50e-11!10;UBERON:0004178!2.50e-11!10;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0002203!9.35e-10!6;UBERON:0001768!9.35e-10!6;UBERON:0000483!1.47e-09!309;UBERON:0000119!2.66e-09!312;UBERON:0004535!1.89e-08!110;UBERON:0003914!2.62e-08!118;UBERON:0004872!3.24e-08!84;UBERON:0001981!5.28e-08!60;UBERON:0007500!5.28e-08!60;UBERON:0004537!5.28e-08!60;UBERON:0006965!5.28e-08!60;UBERON:0001009!5.31e-08!113;UBERON:0000481!9.34e-08!347;UBERON:0000475!1.72e-07!365;UBERON:0002100!3.60e-07!216;UBERON:0000947!3.98e-07!21;UBERON:0010191!3.98e-07!21;UBERON:0000055!4.39e-07!69;UBERON:0000488!9.78e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.83e-21;2!UBERON:0004573;2.12e-20;33!UBERON:0004571;2.12e-20;33!UBERON:0003834;9.39e-19;5!UBERON:0001533;9.39e-19;5!UBERON:0001637;7.35e-17;42!UBERON:0003509;7.35e-17;42!UBERON:0004572;7.35e-17;42!UBERON:0001135;3.47e-16;15!UBERON:0004237;7.20e-16;10!UBERON:0004695;7.20e-16;10!UBERON:0002111;7.20e-16;10!UBERON:0004178;7.20e-16;10!UBERON:0003513;1.43e-13;7!UBERON:0000947;1.28e-11;21!UBERON:0010191;1.28e-11;21!UBERON:0007500;6.80e-09;56!UBERON:0001981;6.80e-09;56!UBERON:0004537;6.80e-09;56!UBERON:0003914;1.36e-08;74!UBERON:0002385;8.78e-08;31!UBERON:0001015;8.78e-08;31!UBERON:0000383;8.78e-08;31!UBERON:0000055;2.90e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.70e-23,33;UBERON:0004571,3.70e-23,33;UBERON:0001637,2.76e-22,42;UBERON:0003509,2.76e-22,42;UBERON:0004572,2.76e-22,42;UBERON:0002456,4.25e-21,2;UBERON:0003834,9.12e-19,5;UBERON:0001533,9.12e-19,5;UBERON:0002329,3.24e-18,71;UBERON:0003059,3.24e-18,71;UBERON:0007282,3.24e-18,71;UBERON:0004290,3.24e-18,71;UBERON:0009618,3.24e-18,71;UBERON:0003077,6.15e-18,72;UBERON:0007285,6.15e-18,72;UBERON:0001134,1.11e-17,62;UBERON:0002036,1.11e-17,62;UBERON:0003082,1.11e-17,62;UBERON:0007524,1.14e-17,73;UBERON:0002385,4.46e-17,64;UBERON:0001015,4.46e-17,64;UBERON:0000383,4.46e-17,64;UBERON:0007503,2.02e-16,78;UBERON:0001135,3.95e-16,15;UBERON:0004237,8.75e-16,10;UBERON:0004695,8.75e-16,10;UBERON:0002111,8.75e-16,10;UBERON:0004178,8.75e-16,10;UBERON:0007500,1.81e-15,59;UBERON:0001981,1.81e-15,59;UBERON:0004537,1.81e-15,59;UBERON:0006965,1.81e-15,59;UBERON:0000486,2.53e-15,83;UBERON:0003513,1.40e-13,7;UBERON:0000055,3.09e-13,68;UBERON:0000947,1.36e-11,21;UBERON:0010191,1.36e-11,21;UBERON:0002049,2.34e-11,78;UBERON:0007798,2.34e-11,78;UBERON:0004872,1.38e-10,83;UBERON:0005256,7.69e-10,122;UBERON:0003498,3.53e-09,5;UBERON:0005985,3.53e-09,5;UBERON:0000490,8.73e-08,148;UBERON:0004535,1.02e-07,109;UBERON:0001009,1.79e-07,112;UBERON:0003914,4.31e-07,117;UBERON:0003104,4.62e-07,160;UBERON:0009142,4.62e-07,160 | |||
|phase1_expression=0,0,0,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.482561763430822,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.25924938732256,1.3940745403212,0.308033580176089,1.06461206063404,1.73986598415015,0.55597265731176,0,0,0,0,0.255897791311334,0,0,0,0.719489830333259,1.64722217841633,0.589062011728432,0.202182481573316,3.17020642346017,0,0,2.19342140668156,2.11300293513511,0.272999822815972,1.1312434556297,3.39024349860728,0,2.65375590096488,0.438450885253763,0,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,5.18532894720761,7.51150928251641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0.453692771289717,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0.53168342911599,0,0,1.90402606084398,2.03435366602331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@PLAT | |||
}} |
Revision as of 21:52, 22 January 2014
Short description: | p9@PLAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PLAT_5end |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | -23bp_to_ENST00000524261_5end |
EntrezGene: | PLAT |
HGNC: | 9051 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.52e-26 | 43 |
smooth muscle myoblast | 3.52e-26 | 43 |
vascular associated smooth muscle cell | 5.94e-24 | 32 |
smooth muscle cell of the internal thoracic artery | 4.25e-21 | 2 |
muscle cell | 3.94e-20 | 55 |
muscle precursor cell | 5.23e-19 | 58 |
myoblast | 5.23e-19 | 58 |
multi-potent skeletal muscle stem cell | 5.23e-19 | 58 |
smooth muscle cell of the subclavian artery | 9.12e-19 | 5 |
electrically responsive cell | 5.38e-18 | 61 |
electrically active cell | 5.38e-18 | 61 |
aortic smooth muscle cell | 8.75e-16 | 10 |
smooth muscle cell of the pulmonary artery | 1.06e-11 | 1 |
meningothelial cell | 1.97e-11 | 1 |
perirenal adipocyte cell | 2.96e-11 | 1 |
mesodermal cell | 2.90e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.30e-31 | 3 |
leiomyoma | 1.30e-31 | 3 |
benign neoplasm | 6.91e-24 | 4 |
central nervous system cancer | 1.97e-11 | 1 |
meningioma | 1.97e-11 | 1 |