FFCP PHASE1:Hg19::chrX:54070784..54070795,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20672 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z911,Q9UPP1 | |||
|association_with_transcript=-177bp_to_ENST00000338154,ENST00000338946,ENST00000396277,NM_001184897,NM_015107,uc004dst.2,uc004dsw.2_5end | |||
|description=CAGE_peak_10_at_PHF8_5end | |||
|id=chrX:54070784..54070795,- | |||
|ontology_enrichment_celltype=CL:0000738!6.16e-24!140;CL:0002031!1.56e-23!124;CL:0002087!2.68e-22!119;CL:0000037!7.04e-20!172;CL:0000566!7.04e-20!172;CL:0002032!8.29e-20!165;CL:0000837!8.29e-20!165;CL:0000988!4.25e-18!182;CL:0000542!5.32e-14!53;CL:0000051!5.32e-14!53;CL:0000838!1.32e-13!52;CL:0002057!2.11e-13!42;CL:0000860!9.19e-13!45;CL:0000557!2.38e-10!71;CL:0000766!2.75e-10!76;CL:0000839!6.78e-10!70;CL:0002009!1.77e-09!65;CL:0002194!8.98e-09!63;CL:0000576!8.98e-09!63;CL:0000040!8.98e-09!63;CL:0000559!8.98e-09!63;CL:0000763!6.28e-08!112;CL:0000049!6.28e-08!112;CL:0000791!7.68e-08!18;CL:0000789!7.68e-08!18;CL:0002420!7.68e-08!18;CL:0002419!7.68e-08!18;CL:0000790!7.68e-08!18;CL:0000084!1.23e-07!25;CL:0000827!1.23e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.09e-12;6!CL:0000898;3.24e-11;3!CL:0000791;1.56e-10;18!CL:0000789;1.56e-10;18!CL:0002419;1.56e-10;18!CL:0000895;4.90e-09;1!CL:0000084;1.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.67e-12,6;CL:0000898,3.79e-11,3;CL:0000791,1.47e-10,18;CL:0000789,1.47e-10,18;CL:0002420,1.47e-10,18;CL:0002419,1.47e-10,18;CL:0000790,1.47e-10,18;CL:0000810,7.85e-09,1;CL:0000895,7.85e-09,1;CL:0002436,7.85e-09,1;CL:0002427,7.85e-09,1;CL:0002428,7.85e-09,1;CL:0002429,7.85e-09,1;CL:0002433,7.85e-09,1;CL:0002431,7.85e-09,1;CL:0002432,7.85e-09,1;CL:0000738,1.90e-08,136;CL:0000838,2.16e-08,52;CL:0000542,3.26e-08,53;CL:0000051,3.26e-08,53;CL:0002032,6.81e-08,161;CL:0000837,6.81e-08,161;CL:0000084,1.51e-07,25;CL:0000827,1.51e-07,25;CL:0000037,1.88e-07,168;CL:0002031,5.52e-07,120;CL:0000988,6.13e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.56e-10;18!CL:0002427;4.90e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.04e-09!102;UBERON:0003061!1.04e-09!102;UBERON:0002193!3.12e-09!112;UBERON:0007023!1.23e-08!115;UBERON:0002371!1.65e-07!80;UBERON:0002405!1.78e-07!115;UBERON:0001474!4.74e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.35e-16;2!UBERON:0005058;2.35e-16;2!UBERON:0009113;2.35e-16;2!UBERON:0000996;4.90e-09;1!UBERON:0004177;4.55e-07;5!UBERON:0005057;4.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.87e-18,4;UBERON:0005058,7.87e-18,4;UBERON:0009113,7.87e-18,4;UBERON:0003295,7.87e-18,4;UBERON:0005562,7.87e-18,4;UBERON:0003351,4.44e-12,6;UBERON:0004177,1.99e-10,7;UBERON:0005057,1.99e-10,7;UBERON:0000996,4.91e-09,1;UBERON:0000974,1.92e-07,10;UBERON:0003408,1.92e-07,10;UBERON:0001042,1.92e-07,10;UBERON:0009145,1.92e-07,10;UBERON:0006562,8.31e-07,11;UBERON:0009722,8.31e-07,11;UBERON:0007690,8.31e-07,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0.328402357799783,0.314843125254717,0,0.767658796194425,0.154816123316076,0,0,0,0.387336002901508,0.284338464974843,0,0.553995408531877,0.401088894940283,0.651032612147555,0.447830948479849,0.32389366601898,0.515151135268373,0.581592955118259,0,0,0.929716147622738,0.822335776043652,0.309706370895104,0,0.768482119587302,0.945928919554341,0.689491361473237,0.645484683583826,0,0.941211697713023,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,1.70489900213078,1.16083695451434,0,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0,0.736555271975129,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0,0.300353785683013,0,0.570025487482497,0.79566670879636,0.91332076882317,0,0.546138611262131,0.889509253863555,1.70692089026603,0.800791974072025,0,1.32208974556972,0,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.393010762749165,1.64481199199607,0.501559486172034,0.32592226663359,1.89379122293893,0,0.222820913770347,1.47302953737419,0.886135578334485,0,0.896639238079726,0.520237390239513,0.986627427622057,1.65810010671509,0.869409257205157,1.63115219478266,0.535081656179426,0,0.226618685395132,1.14966148080576,1.37450978193052,0,0.637130828648193,0,0.950452044448374,0,0.383959833463255,1.24930726552346,0.710331756132051,0,1.41124720257313,0.802320587350522,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0,0.327447688744282,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.710019185033229,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.264145302039678,0.414656231081544,1.00883967391873,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.07813787429759,0.77005821767849,0,0,0,0,0,0,0,2.07207756718018,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0,0.74709290462411,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0.411362273086194,0,0,0,0.213648142254946,0,0,0.371606350251437,0.144269212976445,0.782560276832555,0.318852545457645,0.199579371432817,0.383010740264733,0,0,0,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0,0,0.18714054040822,0.439524537815682,0,0.557216921387392,0,0.23874448473769,0,0.614321404198464,0,0,0.222617410045812,0,0.211125408127993,0.597743964753209,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,1.02314474045374,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0.219385397153973,0.32681539055697,0.278847488557207,0.384751292518985,0.113942055847001,0,0.0897576444097721,0,0.638002319463839,0,0,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0.421996129056054,0,0,0.432777279484182,0.995261931078505,0.176915129006678,0,0.296521128680622,0.617819694732514,0,0.471807930864739,0,0.468528891450678,0.729819156862664,0,0,0,0,0,0.379119477770928,0,0.311064574191741,0,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0,0.873633341210151,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0.353024506766001,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0.288180834308212,0,0.514784993585894,0,0,0.471388069233591,0,0.104602846312333,0,0.577901179803038,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0.2291604240116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| |||
|short_description=p10@PHF8 | |||
}} |
Revision as of 05:47, 23 January 2014
Short description: | p10@PHF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PHF8_5end |
Coexpression cluster: | NA |
Association with transcript: | -177bp_to_ENST00000338154, ENST00000338946, ENST00000396277, NM_001184897, NM_015107, uc004dst.2, uc004dsw.2_5end |
EntrezGene: | PHF8 |
HGNC: | 20672 |
UniProt: | B7Z911Q9UPP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.87e-18 | 4 |
hemolymphoid system gland | 7.87e-18 | 4 |
thymic region | 7.87e-18 | 4 |
pharyngeal gland | 7.87e-18 | 4 |
thymus primordium | 7.87e-18 | 4 |
pharyngeal epithelium | 4.44e-12 | 6 |
hemopoietic organ | 1.99e-10 | 7 |
immune organ | 1.99e-10 | 7 |
vagina | 4.91e-09 | 1 |
neck | 1.92e-07 | 10 |
gland of gut | 1.92e-07 | 10 |
chordate pharynx | 1.92e-07 | 10 |
pharyngeal region of foregut | 1.92e-07 | 10 |
pharynx | 8.31e-07 | 11 |
entire pharyngeal arch endoderm | 8.31e-07 | 11 |
early pharyngeal endoderm | 8.31e-07 | 11 |