FFCP PHASE1:Hg19::chrX:154033633..154033644,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=71bp_to_ENST00000494170_5end | |||
|coexpression_cluster_id=C4864 | |||
|description=CAGE_peak_4_at_MPP1_5end | |||
|id=chrX:154033633..154033644,- | |||
|ontology_enrichment_celltype=CL:0000763!6.92e-21!112;CL:0000049!6.92e-21!112;CL:0000766!4.91e-17!76;CL:0000839!8.86e-17!70;CL:0000557!3.36e-15!71;CL:0002057!1.59e-13!42;CL:0002194!6.86e-13!63;CL:0000576!6.86e-13!63;CL:0000040!6.86e-13!63;CL:0000559!6.86e-13!63;CL:0002009!3.40e-12!65;CL:0000860!2.48e-11!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.26e-17;39!CL:0000234;1.26e-17;39!CL:0000860;1.42e-14;33!CL:0002057;1.42e-14;33!CL:0000766;2.10e-12;69!CL:0000763;1.11e-11;100!CL:0000576;3.24e-10;48!CL:0000235;7.25e-09;6!CL:0000097;4.02e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.94e-33,108;CL:0000049,2.94e-33,108;CL:0000766,1.69e-28,72;CL:0000839,2.49e-27,66;CL:0000557,1.31e-24,67;CL:0000473,1.69e-20,48;CL:0000234,1.69e-20,48;CL:0002194,7.29e-20,59;CL:0000576,7.29e-20,59;CL:0000040,7.29e-20,59;CL:0000559,7.29e-20,59;CL:0002009,7.63e-19,61;CL:0002032,1.45e-16,161;CL:0000837,1.45e-16,161;CL:0000037,1.96e-16,168;CL:0000988,1.19e-14,177;CL:0000860,1.83e-14,42;CL:0002057,1.83e-14,42;CL:0002031,9.30e-10,120;CL:0000738,1.16e-09,136;CL:0000235,3.55e-09,6;CL:0000097,3.57e-08,5;CL:0002028,3.57e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-10;42!CL:0000049;6.95e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.80e-13!216;UBERON:0002390!2.53e-13!102;UBERON:0003061!2.53e-13!102;UBERON:0002193!3.15e-13!112;UBERON:0002371!3.31e-12!80;UBERON:0007023!3.88e-12!115;UBERON:0001474!7.97e-12!86;UBERON:0002405!2.20e-11!115;UBERON:0002204!5.22e-10!167;UBERON:0004765!7.55e-09!101;UBERON:0001434!7.55e-09!101;UBERON:0001009!1.31e-07!113;UBERON:0000467!6.15e-07!625;UBERON:0004535!6.87e-07!110;UBERON:0000480!8.81e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.96e-23,98;UBERON:0003061,6.96e-23,98;UBERON:0002371,3.40e-21,76;UBERON:0002193,4.03e-20,108;UBERON:0001474,1.17e-18,82;UBERON:0003081,3.98e-17,203;UBERON:0002405,1.49e-16,93;UBERON:0004765,7.79e-16,90;UBERON:0001434,5.47e-13,100;UBERON:0000926,9.41e-11,315;UBERON:0004120,9.41e-11,315;UBERON:0006603,9.41e-11,315;UBERON:0002204,1.34e-08,167 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0,0,1.26343974685366,1.04474251279935,0,0,0,0.527533956456907,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0,0,0,0.393364276848904,0,1.23852898652861,0,0,0,0,0,1.17440175733939,2.21598163412751,1.60435557976113,0.868043482863407,4.47830948479849,4.21061765824673,4.89393578504954,2.76256653681173,3.02300754951048,0.970336244751265,2.78914844286822,3.28934310417461,2.78735733805593,2.01384674625505,0.512321413058201,0.945928919554341,3.44745680736619,1.29096936716765,1.35426486594342,2.25890807451126,1.91034305040492,0.674170453335254,3.06083892370903,2.24650318953266,3.19668562899521,2.96866170168044,0.797854630486527,0,2.03146467040009,1.70215567407342,1.86846674698672,1.7587406567972,1.0429658368404,0.65156653411535,5.44859552370032,3.68277635987565,2.53169909952708,0,0.425208599930087,0,0.44931452458598,0.150176892841506,0.803627933485401,0.285012743741249,0.39783335439818,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,3.36305137788922,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.895037932904712,0,0,0.579386075843295,0,0.486634870302636,0.756278537312543,0.665188192387692,0.263504357079378,1.89919659471683,0,0,0,0.522389211897802,1.46253756570752,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,0,0.419499436209906,0,0.835979866147242,0.775250277507987,0.35576626268671,1.00416183829401,0.805658634218294,0.760272105718513,0.732186172644509,1.47065232138347,0,0.625098097988558,1.12264686313085,0.337834441449967,1.53316637465883,0,0.549605231791222,7.9068250461638,11.6334079244498,0,0,0.506522046658319,0.926864265692532,0.573673241497627,0.709336764396714,0.560677600142307,0,0.49333509683432,1.24484414159907,0.942974704487816,0.980771418680752,0,0,0,0.936480230490962,1.1409436430889,0.298897361103602,0.23486899728753,0.161872944368132,0,0,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0,0.567160915800105,0.538168907066586,0,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.806016785821122,0.339121184620975,0.193260853163297,0,0,0.609868530647977,0,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0,2.16563844500876,0.118306800039844,0,0,0,0,0,0.269662616320329,0.196221465125346,0.38474715694639,1.4763109092493,0,0.4115740113314,1.47008711385542,0,0,0,0,1.10689594688802,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,1.44331342025273,0.34779121492523,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,2.46217006087397,1.63802985597466,2.82399208348584,0,0,0,0,0,0,12.8092441852945,3.60998579454227,2.48793738648926,3.89123874225796,2.27236380167484,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0.428933980974443,1.08524321078289,1.64648067356154,0.325736184293735,1.06617584622764,0,0.301439377059586,0.871533458600294,0.599837947092342,4.86495122564762,3.51579964002488,4.21667878966063,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,2.99602809578873,0,5.8018171881045,0,0,0,0.207970861530807,0,0.473107245101804,0.35142424497814,0,2.27407504055985,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,1.07857100409308,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.482561763430822,0,0.154209693802656,0.532685175939381,0.492762936082855,0,0.929683027679674,0.120859449591622,0,0,1.37777337797528,2.1850940160806,1.04899531967539,0,0,0,1.46139224653261,0,2.27466768141793,0.850468526382578,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,7.45483580596178,4.96727356947311,0,0,0,1.64865618636356,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0,0.644521469209642,0.145016693914229,0.170453254832202,0,0,0,0.255225424989168,0,1.39453664789186,0,0.6970372701606,0.616067160352178,0.532306030317022,2.60979897622522,0,0.286249773483982,0,0.316379424718726,0.953150969619124,0.255897791311334,0.42793898803392,1.27281299170375,0,0.899362287916574,0,0.706874414074119,0.404364963146632,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.409499734223957,1.1312434556297,1.13008116620243,2.2054613741845,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,1.12678241012897,0.430234056612155,0.687743287091848,0,0.354761064070598,0.211107635297664,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,2.16530741786592,0,0,0,0,2.53723804616085,2.29391162142713,2.27858874869665,0.476463550915578,0.41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| |||
|short_description=p4@MPP1 | |||
}} |
Revision as of 07:36, 23 January 2014
Short description: | p4@MPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MPP1_5end |
Coexpression cluster: | C4864_Mast_CD14_Eosinophils_Monocytederived_chronic_Reticulocytes_Macrophage |
Association with transcript: | 71bp_to_ENST00000494170_5end |
EntrezGene: | MPP1 |
HGNC: | 7219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.94e-33 | 108 |
common myeloid progenitor | 2.94e-33 | 108 |
myeloid leukocyte | 1.69e-28 | 72 |
myeloid lineage restricted progenitor cell | 2.49e-27 | 66 |
granulocyte monocyte progenitor cell | 1.31e-24 | 67 |
defensive cell | 1.69e-20 | 48 |
phagocyte | 1.69e-20 | 48 |
monopoietic cell | 7.29e-20 | 59 |
monocyte | 7.29e-20 | 59 |
monoblast | 7.29e-20 | 59 |
promonocyte | 7.29e-20 | 59 |
macrophage dendritic cell progenitor | 7.63e-19 | 61 |
hematopoietic oligopotent progenitor cell | 1.45e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-16 | 161 |
hematopoietic stem cell | 1.96e-16 | 168 |
hematopoietic cell | 1.19e-14 | 177 |
classical monocyte | 1.83e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-14 | 42 |
hematopoietic lineage restricted progenitor cell | 9.30e-10 | 120 |
leukocyte | 1.16e-09 | 136 |
macrophage | 3.55e-09 | 6 |
mast cell | 3.57e-08 | 5 |
basophil mast progenitor cell | 3.57e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.96e-23 | 98 |
blood island | 6.96e-23 | 98 |
bone marrow | 3.40e-21 | 76 |
hemolymphoid system | 4.03e-20 | 108 |
bone element | 1.17e-18 | 82 |
lateral plate mesoderm | 3.98e-17 | 203 |
immune system | 1.49e-16 | 93 |
skeletal element | 7.79e-16 | 90 |
skeletal system | 5.47e-13 | 100 |
mesoderm | 9.41e-11 | 315 |
mesoderm-derived structure | 9.41e-11 | 315 |
presumptive mesoderm | 9.41e-11 | 315 |
musculoskeletal system | 1.34e-08 | 167 |