FFCP PHASE1:Hg19::chr10:125979687..125979712,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:125979687..125979712,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:125979687..125979712,- | |||
|id=chr10:125979687..125979712,- | |||
|ontology_enrichment_celltype=CL:0002057!5.73e-120!42;CL:0000860!2.82e-111!45;CL:0000766!3.38e-89!76;CL:0002194!2.61e-87!63;CL:0000576!2.61e-87!63;CL:0000040!2.61e-87!63;CL:0000559!2.61e-87!63;CL:0002009!2.47e-84!65;CL:0000839!2.31e-81!70;CL:0000557!4.44e-80!71;CL:0000763!4.36e-57!112;CL:0000049!4.36e-57!112;CL:0000738!2.79e-52!140;CL:0002087!2.28e-48!119;CL:0002031!1.92e-41!124;CL:0000037!2.24e-40!172;CL:0000566!2.24e-40!172;CL:0000988!1.65e-37!182;CL:0002032!3.73e-35!165;CL:0000837!3.73e-35!165;CL:0002393!1.69e-21!9;CL:0002397!1.69e-21!9;CL:0000134!1.01e-16!358;CL:0002320!3.67e-16!365;CL:0000219!4.95e-15!390;CL:0000034!7.98e-12!444;CL:0000048!7.99e-12!430;CL:0000723!1.73e-11!436;CL:0000842!3.66e-10!3;CL:0000767!4.87e-10!3;CL:0000224!1.00e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.61e-117;33!CL:0002057;8.61e-117;33!CL:0000473;2.03e-78;39!CL:0000234;2.03e-78;39!CL:0000576;3.83e-66;48!CL:0000766;7.71e-37;69!CL:0002087;1.19e-18;104!CL:0000763;2.40e-15;100!CL:0000738;1.59e-11;136!CL:0002393;2.92e-09;6!CL:0002397;2.92e-09;6!CL:0000226;2.04e-08;3!CL:0000842;2.04e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-122,42;CL:0002057,3.26e-122,42;CL:0000473,2.83e-106,48;CL:0000234,2.83e-106,48;CL:0002194,5.97e-84,59;CL:0000576,5.97e-84,59;CL:0000040,5.97e-84,59;CL:0000559,5.97e-84,59;CL:0002009,4.55e-81,61;CL:0000839,1.29e-74,66;CL:0000557,1.93e-73,67;CL:0000766,4.87e-68,72;CL:0002087,7.28e-47,115;CL:0000763,9.25e-44,108;CL:0000049,9.25e-44,108;CL:0002031,7.16e-39,120;CL:0000738,8.09e-39,136;CL:0000037,2.16e-30,168;CL:0000988,1.44e-28,177;CL:0002032,1.28e-27,161;CL:0000837,1.28e-27,161;CL:0000134,1.97e-12,354;CL:0002320,4.49e-12,361;CL:0000219,8.15e-11,386;CL:0000034,1.16e-09,441;CL:0000048,2.85e-09,427;CL:0000723,4.66e-09,433;CL:0000226,1.89e-08,3;CL:0000842,1.89e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-88;42!CL:0000049;1.18e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.93e-70!80;UBERON:0002390!1.61e-66!102;UBERON:0003061!1.61e-66!102;UBERON:0001474!2.29e-64!86;UBERON:0002193!1.35e-59!112;UBERON:0004765!2.82e-53!101;UBERON:0001434!2.82e-53!101;UBERON:0002405!4.52e-50!115;UBERON:0002204!5.04e-28!167;UBERON:0003081!9.62e-27!216;UBERON:0002384!2.14e-15!375;UBERON:0000926!1.71e-07!448;UBERON:0004120!1.71e-07!448;UBERON:0006603!1.71e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.19e-64,76;UBERON:0001474,3.46e-59,82;UBERON:0002390,7.19e-56,98;UBERON:0003061,7.19e-56,98;UBERON:0004765,1.67e-53,90;UBERON:0002405,1.27e-51,93;UBERON:0002193,3.12e-50,108;UBERON:0001434,1.16e-47,100;UBERON:0002204,1.97e-26,167;UBERON:0003081,3.42e-24,203;UBERON:0000926,1.54e-13,315;UBERON:0004120,1.54e-13,315;UBERON:0006603,1.54e-13,315;UBERON:0002384,1.38e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0,0,3.32397245119126,3.20871115952227,2.82114131930607,0,0,0,1.16318591023652,0,0.485168122375632,36.7237878310982,41.5279566902044,64.7286315170766,61.8538643492624,38.6802666858942,36.8912278626193,130.313867318442,132.324360134684,125.946632532738,14.8711448238658,10.0975275521403,10.7867272533641,33.0570603760575,23.7487480036309,30.688182038354,0.659702600373432,2.39356389145958,1.27867425159808,7.2552309657146,2.8369261234557,2.4912889959823,47.988495064038,41.7186334736161,41.7002581833824,2.42159801053347,8.47038562771399,5.37986058649504,0.422510572623884,0.850417199860174,0.419317291016752,0.336985893439485,0.600707571366025,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.94142780736755,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:125979687..125979712,- | |||
}} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:125979687..125979712, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125979687..125979712, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.26e-122 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.26e-122 | 42 |
defensive cell | 2.83e-106 | 48 |
phagocyte | 2.83e-106 | 48 |
monopoietic cell | 5.97e-84 | 59 |
monocyte | 5.97e-84 | 59 |
monoblast | 5.97e-84 | 59 |
promonocyte | 5.97e-84 | 59 |
macrophage dendritic cell progenitor | 4.55e-81 | 61 |
myeloid lineage restricted progenitor cell | 1.29e-74 | 66 |
granulocyte monocyte progenitor cell | 1.93e-73 | 67 |
myeloid leukocyte | 4.87e-68 | 72 |
nongranular leukocyte | 7.28e-47 | 115 |
myeloid cell | 9.25e-44 | 108 |
common myeloid progenitor | 9.25e-44 | 108 |
hematopoietic lineage restricted progenitor cell | 7.16e-39 | 120 |
leukocyte | 8.09e-39 | 136 |
hematopoietic stem cell | 2.16e-30 | 168 |
hematopoietic cell | 1.44e-28 | 177 |
hematopoietic oligopotent progenitor cell | 1.28e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-27 | 161 |
mesenchymal cell | 1.97e-12 | 354 |
connective tissue cell | 4.49e-12 | 361 |
motile cell | 8.15e-11 | 386 |
stem cell | 1.16e-09 | 441 |
multi fate stem cell | 2.85e-09 | 427 |
somatic stem cell | 4.66e-09 | 433 |
single nucleate cell | 1.89e-08 | 3 |
mononuclear cell | 1.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.19e-64 | 76 |
bone element | 3.46e-59 | 82 |
hematopoietic system | 7.19e-56 | 98 |
blood island | 7.19e-56 | 98 |
skeletal element | 1.67e-53 | 90 |
immune system | 1.27e-51 | 93 |
hemolymphoid system | 3.12e-50 | 108 |
skeletal system | 1.16e-47 | 100 |
musculoskeletal system | 1.97e-26 | 167 |
lateral plate mesoderm | 3.42e-24 | 203 |
mesoderm | 1.54e-13 | 315 |
mesoderm-derived structure | 1.54e-13 | 315 |
presumptive mesoderm | 1.54e-13 | 315 |
connective tissue | 1.38e-11 | 371 |