FFCP PHASE1:Hg19::chr10:126029734..126029749,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126029734..126029749,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr10:126029734..126029749,- | |description=CAGE_peak_at_chr10:126029734..126029749,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!5.68e-129!42;CL:0000860!1.02e-119!45;CL:0002194!1.60e-85!63;CL:0000576!1.60e-85!63;CL:0000040!1.60e-85!63;CL:0000559!1.60e-85!63;CL:0002009!1.25e-82!65;CL:0000766!3.46e-81!76;CL:0000839!4.18e-76!70;CL:0000557!6.56e-75!71;CL:0000763!5.35e-52!112;CL:0000049!5.35e-52!112;CL:0002087!1.34e-50!119;CL:0000738!1.88e-48!140;CL:0002031!4.91e-41!124;CL:0000037!1.80e-37!172;CL:0000566!1.80e-37!172;CL:0000988!1.45e-36!182;CL:0002032!8.88e-34!165;CL:0000837!8.88e-34!165;CL:0002393!2.68e-24!9;CL:0002397!2.68e-24!9;CL:0002320!3.26e-16!365;CL:0000134!7.87e-16!358;CL:0000219!1.81e-13!390;CL:0000767!9.66e-12!3;CL:0000034!2.63e-11!444;CL:0000048!2.86e-11!430;CL:0000842!2.92e-11!3;CL:0000723!5.87e-11!436;CL:0000080!1.84e-09!6;CL:0000224!1.50e-08!4;CL:0002371!2.98e-07!591;CL:0000063!3.88e-07!578;CL:0000144!8.32e-07!625 | |ontology_enrichment_celltype=CL:0002057!5.68e-129!42;CL:0000860!1.02e-119!45;CL:0002194!1.60e-85!63;CL:0000576!1.60e-85!63;CL:0000040!1.60e-85!63;CL:0000559!1.60e-85!63;CL:0002009!1.25e-82!65;CL:0000766!3.46e-81!76;CL:0000839!4.18e-76!70;CL:0000557!6.56e-75!71;CL:0000763!5.35e-52!112;CL:0000049!5.35e-52!112;CL:0002087!1.34e-50!119;CL:0000738!1.88e-48!140;CL:0002031!4.91e-41!124;CL:0000037!1.80e-37!172;CL:0000566!1.80e-37!172;CL:0000988!1.45e-36!182;CL:0002032!8.88e-34!165;CL:0000837!8.88e-34!165;CL:0002393!2.68e-24!9;CL:0002397!2.68e-24!9;CL:0002320!3.26e-16!365;CL:0000134!7.87e-16!358;CL:0000219!1.81e-13!390;CL:0000767!9.66e-12!3;CL:0000034!2.63e-11!444;CL:0000048!2.86e-11!430;CL:0000842!2.92e-11!3;CL:0000723!5.87e-11!436;CL:0000080!1.84e-09!6;CL:0000224!1.50e-08!4;CL:0002371!2.98e-07!591;CL:0000063!3.88e-07!578;CL:0000144!8.32e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.61e-95;33!CL:0002057;6.61e-95;33!CL:0000473;2.35e-64;39!CL:0000234;2.35e-64;39!CL:0000576;3.57e-62;48!CL:0000766;5.51e-42;69!CL:0002393;8.88e-24;6!CL:0002397;8.88e-24;6!CL:0002087;2.29e-18;104!CL:0000763;1.10e-17;100!CL:0000767;2.26e-17;3!CL:0000226;1.01e-16;3!CL:0000842;1.01e-16;3!CL:0000738;1.63e-10;136!CL:0000094;8.21e-07;8!CL:0000988;9.13e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;6.61e-95;33!CL:0002057;6.61e-95;33!CL:0000473;2.35e-64;39!CL:0000234;2.35e-64;39!CL:0000576;3.57e-62;48!CL:0000766;5.51e-42;69!CL:0002393;8.88e-24;6!CL:0002397;8.88e-24;6!CL:0002087;2.29e-18;104!CL:0000763;1.10e-17;100!CL:0000767;2.26e-17;3!CL:0000226;1.01e-16;3!CL:0000842;1.01e-16;3!CL:0000738;1.63e-10;136!CL:0000094;8.21e-07;8!CL:0000988;9.13e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.30e-115,42;CL:0002057,8.30e-115,42;CL:0000473,9.48e-100,48;CL:0000234,9.48e-100,48;CL:0002194,1.16e-78,59;CL:0000576,1.16e-78,59;CL:0000040,1.16e-78,59;CL:0000559,1.16e-78,59;CL:0000766,6.15e-78,72;CL:0002009,6.14e-76,61;CL:0000839,7.64e-70,66;CL:0000557,9.88e-69,67;CL:0000763,3.16e-50,108;CL:0000049,3.16e-50,108;CL:0000738,6.32e-47,136;CL:0002087,1.30e-46,115;CL:0000037,7.05e-37,168;CL:0002031,4.46e-36,120;CL:0000988,1.06e-34,177;CL:0002032,8.31e-32,161;CL:0000837,8.31e-32,161;CL:0000767,2.02e-17,3;CL:0000226,1.13e-16,3;CL:0000842,1.13e-16,3;CL:0002393,8.08e-16,9;CL:0002397,8.08e-16,9;CL:0000134,3.05e-14,354;CL:0002320,7.68e-14,361;CL:0000219,1.99e-12,386;CL:0000048,1.07e-10,427;CL:0000723,1.85e-10,433;CL:0000034,3.77e-10,441;CL:0000094,7.88e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-86;42!CL:0000049;7.80e-15;108 | |ontology_enrichment_development_v019=CL:0002057;2.25e-86;42!CL:0000049;7.80e-15;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.79e-65!80;UBERON:0002390!1.03e-60!102;UBERON:0003061!1.03e-60!102;UBERON:0001474!2.87e-60!86;UBERON:0002193!2.08e-54!112;UBERON:0004765!1.54e-52!101;UBERON:0001434!1.54e-52!101;UBERON:0002405!1.07e-42!115;UBERON:0002204!6.46e-28!167;UBERON:0003081!6.14e-26!216;UBERON:0002384!1.79e-15!375;UBERON:0000926!7.83e-09!448;UBERON:0004120!7.83e-09!448;UBERON:0006603!7.83e-09!448 | |ontology_enrichment_uberon=UBERON:0002371!1.79e-65!80;UBERON:0002390!1.03e-60!102;UBERON:0003061!1.03e-60!102;UBERON:0001474!2.87e-60!86;UBERON:0002193!2.08e-54!112;UBERON:0004765!1.54e-52!101;UBERON:0001434!1.54e-52!101;UBERON:0002405!1.07e-42!115;UBERON:0002204!6.46e-28!167;UBERON:0003081!6.14e-26!216;UBERON:0002384!1.79e-15!375;UBERON:0000926!7.83e-09!448;UBERON:0004120!7.83e-09!448;UBERON:0006603!7.83e-09!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.03e-60,76;UBERON:0002390,1.20e-55,98;UBERON:0003061,1.20e-55,98;UBERON:0001474,2.88e-55,82;UBERON:0002193,5.42e-50,108;UBERON:0004765,6.73e-50,90;UBERON:0002405,4.04e-48,93;UBERON:0001434,2.21e-44,100;UBERON:0002204,2.50e-24,167;UBERON:0003081,7.27e-24,203;UBERON:0002384,2.71e-13,371;UBERON:0000926,3.53e-13,315;UBERON:0004120,3.53e-13,315;UBERON:0006603,3.53e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.53531759238885,6.34746105595912,0,0,0,0,0,0,12.7418943962332,14.6397446653203,13.6716848550987,0,0,0,0.581592955118259,1.13362783106643,0.242584061187816,6.27558399645349,4.93401465626191,10.2203102395384,9.20615655430881,7.42866048934392,4.7296445977717,8.96338769915208,10.3277549373412,6.77132432971709,4.70605848856512,3.0019676506363,0.898893937780338,7.65209730927256,7.06043859567406,1.27867425159808,0.329851300186716,1.19678194572979,0,3.77272010217159,2.26954089876456,0.622822248995575,6.02996796616184,3.12889751052121,3.04064382587163,2.42159801053347,4.78760926783834,0.949387162322653,1.47878700418359,1.4882300997553,0.419317291016752,1.57260083605093,1.95229960693958,0.964353520182481,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.53531759238885,6.34746105595912,0,0,0,0,0,0,12.7418943962332,14.6397446653203,13.6716848550987,0,0,0,0.581592955118259,1.13362783106643,0.242584061187816,6.27558399645349,4.93401465626191,10.2203102395384,9.20615655430881,7.42866048934392,4.7296445977717,8.96338769915208,10.3277549373412,6.77132432971709,4.70605848856512,3.0019676506363,0.898893937780338,7.65209730927256,7.06043859567406,1.27867425159808,0.329851300186716,1.19678194572979,0,3.77272010217159,2.26954089876456,0.622822248995575,6.02996796616184,3.12889751052121,3.04064382587163,2.42159801053347,4.78760926783834,0.949387162322653,1.47878700418359,1.4882300997553,0.419317291016752,1.57260083605093,1.95229960693958,0.964353520182481,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:126029734..126029749,- | |short_description=p@chr10:126029734..126029749,- | ||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:126029734..126029749, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126029734..126029749, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.03e-60 | 76 |
hematopoietic system | 1.20e-55 | 98 |
blood island | 1.20e-55 | 98 |
bone element | 2.88e-55 | 82 |
hemolymphoid system | 5.42e-50 | 108 |
skeletal element | 6.73e-50 | 90 |
immune system | 4.04e-48 | 93 |
skeletal system | 2.21e-44 | 100 |
musculoskeletal system | 2.50e-24 | 167 |
lateral plate mesoderm | 7.27e-24 | 203 |
connective tissue | 2.71e-13 | 371 |
mesoderm | 3.53e-13 | 315 |
mesoderm-derived structure | 3.53e-13 | 315 |
presumptive mesoderm | 3.53e-13 | 315 |