FFCP PHASE1:Hg19::chr10:126688419..126688422,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126688419..126688422,+
|short_description=p@chr10:126688419..126688422,+
|description=CAGE_peak_at_chr10:126688419..126688422,+
|association_with_transcri...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126688419..126688422,+ | |||
|description=CAGE_peak_at_chr10:126688419..126688422,+ | |||
|id=chr10:126688419..126688422,+ | |||
|ontology_enrichment_celltype=CL:0000569!6.59e-08!4;CL:0000011!6.59e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000222;5.97e-34;1!CL:0002569;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.18e-34;1!UBERON:0006965;5.96e-18;2!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-28!115;UBERON:0002298!1.34e-18!8;UBERON:0001049!9.58e-15!57;UBERON:0005068!9.58e-15!57;UBERON:0006241!9.58e-15!57;UBERON:0007135!9.58e-15!57;UBERON:0003075!2.30e-13!86;UBERON:0007284!2.30e-13!86;UBERON:0005743!3.79e-13!86;UBERON:0002346!1.58e-12!90;UBERON:0002616!2.05e-12!59;UBERON:0000073!2.10e-11!94;UBERON:0001016!2.10e-11!94;UBERON:0001017!3.41e-11!82;UBERON:0000988!6.64e-10!3;UBERON:0000955!7.80e-10!69;UBERON:0006238!7.80e-10!69;UBERON:0006331!9.64e-10!3;UBERON:0003076!1.93e-09!15;UBERON:0003057!1.93e-09!15;UBERON:0004733!7.27e-09!12;UBERON:0002028!7.27e-09!12;UBERON:0007277!7.27e-09!12;UBERON:0000033!1.39e-08!123;UBERON:0002308!3.92e-08!9;UBERON:0000125!3.92e-08!9;UBERON:0004732!3.94e-08!13;UBERON:0000153!6.13e-08!129;UBERON:0007811!6.13e-08!129;UBERON:0003080!6.60e-08!42;UBERON:0002950!1.37e-07!2;UBERON:0001891!1.37e-07!2;UBERON:0009616!1.37e-07!2;UBERON:0002360!1.72e-07!2;UBERON:0000094!1.72e-07!2;UBERON:0007645!1.72e-07!2;UBERON:0002148!5.09e-07!2;UBERON:0009662!5.09e-07!2;UBERON:0001893!6.73e-07!34;UBERON:0002020!7.42e-07!34;UBERON:0003528!7.42e-07!34;UBERON:0003056!7.66e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.04e-14;10!UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5!UBERON:0003422;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.47e-14,10;UBERON:0000358,3.47e-14,10;UBERON:0000307,3.47e-14,10;UBERON:0000091,3.47e-14,10;UBERON:0000087,3.47e-14,10;UBERON:0007010,3.47e-14,10;UBERON:0007806,3.47e-14,10;UBERON:0008780,3.47e-14,10;UBERON:0005728,3.47e-14,10;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6;UBERON:0003422,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0,0,0,0.156986185701028,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,2.34640942403454,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0,0,0,0.156986185701028,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,2.34640942403454,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr10:126688419..126688422,+ | |||
}} | }} |
Latest revision as of 11:25, 23 July 2015
Short description: | p@chr10:126688419..126688422, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126688419..126688422, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.47e-14 | 10 |
blastocyst | 3.47e-14 | 10 |
blastula | 3.47e-14 | 10 |
bilaminar disc | 3.47e-14 | 10 |
inner cell mass | 3.47e-14 | 10 |
cleaving embryo | 3.47e-14 | 10 |
connecting stalk | 3.47e-14 | 10 |
inner cell mass derived epiblast | 3.47e-14 | 10 |
extraembryonic mesoderm | 3.47e-14 | 10 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
mesenchyme of umbilical cord | 9.49e-07 | 6 |