FFCP PHASE1:Hg19::chr10:17279356..17279382,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17279356..17279382,+ | |||
|coexpression_cluster_id=C2999 | |||
|description=CAGE_peak_at_chr10:17279356..17279382,+ | |description=CAGE_peak_at_chr10:17279356..17279382,+ | ||
|id=chr10:17279356..17279382,+ | |id=chr10:17279356..17279382,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-16!180;CL:0002371!6.61e-16!591;CL:0000048!6.15e-15!430;CL:0002057!9.18e-15!42;CL:0000723!2.68e-14!436;CL:0000144!3.20e-13!625;CL:0000034!3.22e-13!444;CL:0000557!4.89e-13!71;CL:0002009!7.67e-13!65;CL:0000860!1.56e-12!45;CL:0002194!2.11e-12!63;CL:0000576!2.11e-12!63;CL:0000040!2.11e-12!63;CL:0000559!2.11e-12!63;CL:0000839!4.29e-12!70;CL:0000766!1.83e-11!76;CL:0000057!8.28e-11!75;CL:0002320!3.74e-09!365;CL:0000548!7.70e-09!679;CL:0000004!7.70e-09!679;CL:0000255!7.70e-09!679;CL:0000012!1.06e-08!682;CL:0000219!3.15e-08!390;CL:0000134!6.68e-08!358;CL:0002620!4.60e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.41e-16!180;CL:0002371!6.61e-16!591;CL:0000048!6.15e-15!430;CL:0002057!9.18e-15!42;CL:0000723!2.68e-14!436;CL:0000144!3.20e-13!625;CL:0000034!3.22e-13!444;CL:0000557!4.89e-13!71;CL:0002009!7.67e-13!65;CL:0000860!1.56e-12!45;CL:0002194!2.11e-12!63;CL:0000576!2.11e-12!63;CL:0000040!2.11e-12!63;CL:0000559!2.11e-12!63;CL:0000839!4.29e-12!70;CL:0000766!1.83e-11!76;CL:0000057!8.28e-11!75;CL:0002320!3.74e-09!365;CL:0000548!7.70e-09!679;CL:0000004!7.70e-09!679;CL:0000255!7.70e-09!679;CL:0000012!1.06e-08!682;CL:0000219!3.15e-08!390;CL:0000134!6.68e-08!358;CL:0002620!4.60e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-24;33!CL:0002057;1.46e-24;33!CL:0000473;1.21e-18;39!CL:0000234;1.21e-18;39!CL:0000576;3.18e-12;48!CL:0000766;4.80e-08;69!CL:0002620;9.25e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.69e-22,42;CL:0002057,8.69e-22,42;CL:0000473,2.65e-21,48;CL:0000234,2.65e-21,48;CL:0002194,2.13e-19,59;CL:0000576,2.13e-19,59;CL:0000040,2.13e-19,59;CL:0000559,2.13e-19,59;CL:0000839,3.88e-19,66;CL:0000557,1.05e-18,67;CL:0002009,1.85e-18,61;CL:0000766,6.29e-18,72;CL:0000048,8.23e-10,427;CL:0000723,2.28e-09,433;CL:0000763,7.95e-09,108;CL:0000049,7.95e-09,108;CL:0000034,8.41e-09,441;CL:0002031,1.11e-07,120;CL:0002320,2.82e-07,361;CL:0002087,4.89e-07,115;CL:0002620,9.53e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.61e-17!167;UBERON:0002371!1.38e-11!80;UBERON:0003081!1.57e-11!216;UBERON:0004765!4.21e-11!101;UBERON:0001434!4.21e-11!101;UBERON:0001474!1.38e-10!86;UBERON:0002384!2.35e-10!375;UBERON:0002193!6.60e-10!112;UBERON:0002390!2.86e-08!102;UBERON:0003061!2.86e-08!102;UBERON:0000914!5.91e-08!83;UBERON:0002329!5.91e-08!83;UBERON:0003077!5.91e-08!83;UBERON:0003059!5.91e-08!83;UBERON:0007282!5.91e-08!83;UBERON:0009618!5.91e-08!83;UBERON:0007285!5.91e-08!83;UBERON:0002049!1.78e-07!79;UBERON:0007798!1.78e-07!79;UBERON:0004290!2.62e-07!70;UBERON:0004535!3.46e-07!110;UBERON:0001009!8.59e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.02e-18,76;UBERON:0004765,9.24e-18,90;UBERON:0002204,4.72e-17,167;UBERON:0001474,8.31e-17,82;UBERON:0001434,8.44e-16,100;UBERON:0002405,9.99e-16,93;UBERON:0002193,4.58e-12,108;UBERON:0002390,1.37e-11,98;UBERON:0003061,1.37e-11,98;UBERON:0003081,9.45e-10,203;UBERON:0002384,8.01e-09,371;UBERON:0000926,6.77e-08,315;UBERON:0004120,6.77e-08,315;UBERON:0006603,6.77e-08,315 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,1.60896258848061,0.994192127183747,0,1.20538905604795,0.730310090387373,0,0.246242116153576,1.02000345622126,0.313454721478088,0.85870796139317,1.09499540058307,1.00434111675842,0,0,0,0.393364276848904,0.767658796194425,1.23852898652861,0,0,0.369754010166788,0,0,0,0.553995408531877,0.802177789880567,1.51907609501096,0,0.32389366601898,0,0.290796477559129,0.755751887377619,1.69808842831471,2.09186133215116,1.23350366406548,2.47765096716083,2.58923153089935,2.30544635876191,2.12834006899727,3.44745680736619,0.645484683583826,1.35426486594342,0.941211697713023,1.36453075028923,1.57306439111559,2.14258724659632,2.24650318953266,3.83602275479425,1.64925650093358,1.79517291859469,0.852449501065388,2.03146467040009,4.53908179752912,2.4912889959823,1.7587406567972,6.77927793946262,3.04064382587163,2.42159801053347,4.05105399586321,6.32924774881769,0.633765858935825,0,0.419317291016752,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.650296737799391,0.657751618414705,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0,4.87613732627923,0.670700859703636,0.255725123687061,1.0843174571537,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,1.32348744029695,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,2.59637914923747,1.0447784237956,1.46253756570752,0.476981248610684,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.417989933073621,0.775250277507987,0.35576626268671,0,0,0.760272105718513,1.70843440283719,1.10298924103761,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,1.49091585508596,1.01304409331664,0.926864265692532,0.286836620748814,0,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.302714855289863,1.15235184896,0.234321431833797,0.936480230490962,0.570471821544449,1.79338416662161,0.704606991862589,0.161872944368132,0.421352420106746,0.816616685019573,0.737005903870608,0.413303124703062,0,0.741800787835671,0.910161361938026,1.43723628363248,0.673344455816265,0.250237039743928,1.10825646193673,0.877955241761676,0.30648779579902,0.600952235626387,1.02088964844019,4.12596162084383,0.213557388818567,2.11931901159562,3.00091096084402,0.206105058476878,1.03056216018252,1.8611685633159,3.88185564154912,0.487185025805993,1.7670364197088,2.02509777013059,0.161646056818812,2.13005755509969,0.302256294682921,1.01736355386293,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,1.92972281457866,1.38134921352481,0.928735856063958,2.16563844500876,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0,0.686271241194102,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,1.04337364477569,0.939269553886573,1.29929802984966,1.85194205030644,0.761016608938393,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0,0,0,0.358234090811393,0,0,0,0.264145302039678,1.24396869324463,3.45887888200707,0.75745460055828,0.063497894292169,0,0,1.71072446022705,0.411309970813294,1.8020583470635,0.285826432630578,0.112131084345361,0,0.1466765716419,0.775630294546667,0,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.399891964728228,1.2162378064119,0.502257091432126,2.10833939483032,0.718874566474748,1.14861935834114,0,1.01346914667305,0.410952645100767,0.716243852959582,0.336255431980582,0,0.215627574859517,0.256686072559497,0.254094624222463,0,3.09315525111078,0.335032530668698,0.637938751653163,0,0,0,1.8403723757871,2.00068208423871,0.271265023699736,5.61521326133179,4.10386674233472,2.83864347061082,2.81139395982512,0.601892199455438,0,1.03473071292505,0,0.553107505625109,2.86715927744673,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.744323423456331,0.460385919864187,0.561320188866147,0.256278298511402,0,0.482561763430822,0,0.925258162815933,0.887808626565635,0.9033987161519,1.03850885836724,1.51073491997947,0,0,0,0.803701137152247,0,0.393373244878272,0.451199612907412,0.308061348417659,0,0,0.316654886678627,0,0.680374821106063,1.29549549661284,1.54227252690289,0,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.870036464629098,0,0.307007349452259,0.551346289938122,1.28904293841928,0.290033387828457,0.255679882248303,0.445160178233687,0.165284915360978,0.192190067365106,0.127612712494584,0,0.929691098594572,0.31481234683064,0,2.772302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| ||
|short_description=p@chr10:17279356..17279382,+ | |short_description=p@chr10:17279356..17279382,+ | ||
}} | }} |
Latest revision as of 12:18, 23 July 2015
Short description: | p@chr10:17279356..17279382, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17279356..17279382, + |
Coexpression cluster: | C2999_renal_Cardiac_CD14_Chondrocyte_Myoblast_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.69e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.69e-22 | 42 |
defensive cell | 2.65e-21 | 48 |
phagocyte | 2.65e-21 | 48 |
monopoietic cell | 2.13e-19 | 59 |
monocyte | 2.13e-19 | 59 |
monoblast | 2.13e-19 | 59 |
promonocyte | 2.13e-19 | 59 |
myeloid lineage restricted progenitor cell | 3.88e-19 | 66 |
granulocyte monocyte progenitor cell | 1.05e-18 | 67 |
macrophage dendritic cell progenitor | 1.85e-18 | 61 |
myeloid leukocyte | 6.29e-18 | 72 |
multi fate stem cell | 8.23e-10 | 427 |
somatic stem cell | 2.28e-09 | 433 |
myeloid cell | 7.95e-09 | 108 |
common myeloid progenitor | 7.95e-09 | 108 |
stem cell | 8.41e-09 | 441 |
hematopoietic lineage restricted progenitor cell | 1.11e-07 | 120 |
connective tissue cell | 2.82e-07 | 361 |
nongranular leukocyte | 4.89e-07 | 115 |
skin fibroblast | 9.53e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.02e-18 | 76 |
skeletal element | 9.24e-18 | 90 |
musculoskeletal system | 4.72e-17 | 167 |
bone element | 8.31e-17 | 82 |
skeletal system | 8.44e-16 | 100 |
immune system | 9.99e-16 | 93 |
hemolymphoid system | 4.58e-12 | 108 |
hematopoietic system | 1.37e-11 | 98 |
blood island | 1.37e-11 | 98 |
lateral plate mesoderm | 9.45e-10 | 203 |
connective tissue | 8.01e-09 | 371 |
mesoderm | 6.77e-08 | 315 |
mesoderm-derived structure | 6.77e-08 | 315 |
presumptive mesoderm | 6.77e-08 | 315 |