FFCP PHASE1:Hg19::chr10:20017497..20017513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000423551,ENST00000431157,ENST00000451713,uc001iqf.2_5end | |association_with_transcript=-18bp_to_ENST00000423551,ENST00000431157,ENST00000451713,uc001iqf.2_5end | ||
|cluster_id=chr10:20017497..20017513,- | |||
|coexpression_cluster_id=C975 | |coexpression_cluster_id=C975 | ||
|description=CAGE_peak_4_at_ENST00000423551_5end,CAGE_peak_4_at_ENST00000431157_5end,CAGE_peak_4_at_ENST00000451713_5end,CAGE_peak_4_at_uc001iqf.2_5end | |description=CAGE_peak_4_at_ENST00000423551_5end,CAGE_peak_4_at_ENST00000431157_5end,CAGE_peak_4_at_ENST00000451713_5end,CAGE_peak_4_at_uc001iqf.2_5end | ||
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|ontology_enrichment_celltype=CL:0002274!7.28e-16!5;CL:0000457!7.28e-16!5;CL:0002191!7.28e-16!5;CL:0000097!7.28e-16!5;CL:0000831!7.28e-16!5;CL:0002028!7.28e-16!5;CL:0000763!1.02e-12!112;CL:0000049!1.02e-12!112;CL:0000037!1.20e-08!172;CL:0000566!1.20e-08!172;CL:0000163!1.38e-08!9;CL:0002032!8.37e-08!165;CL:0000837!8.37e-08!165;CL:0000988!9.30e-08!182;CL:0000764!9.34e-07!2;CL:0000765!9.34e-07!2;CL:0000050!9.34e-07!2;CL:0000038!9.34e-07!2;CL:0000558!9.34e-07!2;CL:0000547!9.34e-07!2;CL:0000549!9.34e-07!2;CL:0000550!9.34e-07!2;CL:0000552!9.34e-07!2 | |ontology_enrichment_celltype=CL:0002274!7.28e-16!5;CL:0000457!7.28e-16!5;CL:0002191!7.28e-16!5;CL:0000097!7.28e-16!5;CL:0000831!7.28e-16!5;CL:0002028!7.28e-16!5;CL:0000763!1.02e-12!112;CL:0000049!1.02e-12!112;CL:0000037!1.20e-08!172;CL:0000566!1.20e-08!172;CL:0000163!1.38e-08!9;CL:0002032!8.37e-08!165;CL:0000837!8.37e-08!165;CL:0000988!9.30e-08!182;CL:0000764!9.34e-07!2;CL:0000765!9.34e-07!2;CL:0000050!9.34e-07!2;CL:0000038!9.34e-07!2;CL:0000558!9.34e-07!2;CL:0000547!9.34e-07!2;CL:0000549!9.34e-07!2;CL:0000550!9.34e-07!2;CL:0000552!9.34e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.03e-34;5!CL:0000163;7.63e-19;9!CL:0000764;2.12e-13;2!CL:0000558;2.12e-13;2!CL:0000763;8.80e-11;100!CL:0000767;3.10e-09;3!CL:0000037;1.04e-07;1!CL:0001024;1.04e-07;1 | |ontology_enrichment_celltype_v019=CL:0000097;5.03e-34;5!CL:0000163;7.63e-19;9!CL:0000764;2.12e-13;2!CL:0000558;2.12e-13;2!CL:0000763;8.80e-11;100!CL:0000767;3.10e-09;3!CL:0000037;1.04e-07;1!CL:0001024;1.04e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.03e-34,5;CL:0002028,5.03e-34,5;CL:0000763,1.48e-24,108;CL:0000049,1.48e-24,108;CL:0000163,7.63e-19,9;CL:0000037,7.40e-16,168;CL:0002032,4.30e-15,161;CL:0000837,4.30e-15,161;CL:0000988,7.95e-15,177;CL:0000764,2.41e-13,2;CL:0000765,2.41e-13,2;CL:0000050,2.41e-13,2;CL:0000038,2.41e-13,2;CL:0000558,2.41e-13,2;CL:0000547,2.41e-13,2;CL:0000549,2.41e-13,2;CL:0000550,2.41e-13,2;CL:0000552,2.41e-13,2;CL:0000767,3.52e-09,3;CL:0001024,1.11e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000049;7.09e-08;108 | |ontology_enrichment_development_v019=CL:0000049;7.09e-08;108 | ||
|ontology_enrichment_disease=DOID:8692!2.18e-20!31;DOID:1240!2.26e-17!39;DOID:1036!1.20e-12!8;DOID:2531!3.16e-12!51;DOID:0060083!3.16e-12!51 | |ontology_enrichment_disease=DOID:8692!2.18e-20!31;DOID:1240!2.26e-17!39;DOID:1036!1.20e-12!8;DOID:2531!3.16e-12!51;DOID:0060083!3.16e-12!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.06e-31;31!DOID:1240;1.72e-20;39!DOID:2531;7.93e-14;51!DOID:0060083;7.93e-14;51!DOID:1036;1.86e-13;8!DOID:9119;1.04e-07;1!DOID:8552;1.04e-07;1!DOID:5662;1.54e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;5.06e-31;31!DOID:1240;1.72e-20;39!DOID:2531;7.93e-14;51!DOID:0060083;7.93e-14;51!DOID:1036;1.86e-13;8!DOID:9119;1.04e-07;1!DOID:8552;1.04e-07;1!DOID:5662;1.54e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,6.48e-33,31;DOID:1240,1.19e-25,39;DOID:2531,5.05e-19,51;DOID:0060083,5.05e-19,51;DOID:1036,1.86e-13,8;DOID:8552,9.72e-08,1;DOID:9119,1.04e-07,1;DOID:5662,1.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.45e-11!15;UBERON:0000179!7.45e-11!15;UBERON:0000463!7.45e-11!15;UBERON:0007023!1.10e-10!115 | |ontology_enrichment_uberon=UBERON:0000178!7.45e-11!15;UBERON:0000179!7.45e-11!15;UBERON:0000463!7.45e-11!15;UBERON:0007023!1.10e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.30e-07;15!UBERON:0000179;7.30e-07;15!UBERON:0000463;7.30e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.30e-07;15!UBERON:0000179;7.30e-07;15!UBERON:0000463;7.30e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.90e-07,15;UBERON:0000179,6.90e-07,15;UBERON:0000463,6.90e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0,0,0,0,0,0,2.05520307534393,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6513985737078,19.6177997043538,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0964780842769,22.188205371333,20.5254834385364,23.6356723603817,17.4214558128404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,4.05958087385735,0.764637207142375,0,1.19115887728894,0.411362273086194,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,4.7899049143876,1.1490322207942,0,0.324621940274555,9.5471040558576,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,8.90899756464776,0,19.4728088502708,2.66457574398256,12.6888304579065,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,13.8142625627622,2.99181027420282,0.225595660617181,0,0.167821586975843,6.26187317989811,7.4700192120778,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2168958406436,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8863681038116,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.33639558774184,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0,0,0,0,0,0,2.05520307534393,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6513985737078,19.6177997043538,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0964780842769,22.188205371333,20.5254834385364,23.6356723603817,17.4214558128404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,4.05958087385735,0.764637207142375,0,1.19115887728894,0.411362273086194,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,4.7899049143876,1.1490322207942,0,0.324621940274555,9.5471040558576,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,8.90899756464776,0,19.4728088502708,2.66457574398256,12.6888304579065,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,13.8142625627622,2.99181027420282,0.225595660617181,0,0.167821586975843,6.26187317989811,7.4700192120778,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2168958406436,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8863681038116,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.33639558774184,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p4@ENST00000423551,p4@ENST00000431157,p4@ENST00000451713,p4@uc001iqf.2 | |short_description=p4@ENST00000423551,p4@ENST00000431157,p4@ENST00000451713,p4@uc001iqf.2 | ||
}} | }} |
Latest revision as of 12:27, 23 July 2015
Short description: | p4@ENST00000423551, p4@ENST00000431157, p4@ENST00000451713, p4@uc001iqf.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000423551_5end, CAGE_peak_4_at_ENST00000431157_5end, CAGE_peak_4_at_ENST00000451713_5end, CAGE_peak_4_at_uc001iqf.2_5end |
Coexpression cluster: | C975_Mast_chronic_CD34_acute_leukemia_CD133_Whole |
Association with transcript: | -18bp_to_ENST00000423551, ENST00000431157, ENST00000451713, uc001iqf.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.03e-34 | 5 |
basophil mast progenitor cell | 5.03e-34 | 5 |
myeloid cell | 1.48e-24 | 108 |
common myeloid progenitor | 1.48e-24 | 108 |
endocrine cell | 7.63e-19 | 9 |
hematopoietic stem cell | 7.40e-16 | 168 |
hematopoietic oligopotent progenitor cell | 4.30e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.30e-15 | 161 |
hematopoietic cell | 7.95e-15 | 177 |
erythroid lineage cell | 2.41e-13 | 2 |
erythroblast | 2.41e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 2.41e-13 | 2 |
erythroid progenitor cell | 2.41e-13 | 2 |
reticulocyte | 2.41e-13 | 2 |
proerythroblast | 2.41e-13 | 2 |
basophilic erythroblast | 2.41e-13 | 2 |
polychromatophilic erythroblast | 2.41e-13 | 2 |
orthochromatic erythroblast | 2.41e-13 | 2 |
basophil | 3.52e-09 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.11e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 6.90e-07 | 15 |
haemolymphatic fluid | 6.90e-07 | 15 |
organism substance | 6.90e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.48e-33 | 31 |
leukemia | 1.19e-25 | 39 |
hematologic cancer | 5.05e-19 | 51 |
immune system cancer | 5.05e-19 | 51 |
chronic leukemia | 1.86e-13 | 8 |
chronic myeloid leukemia | 9.72e-08 | 1 |
acute myeloid leukemia | 1.04e-07 | 1 |
pleomorphic carcinoma | 1.18e-07 | 1 |