FFCP PHASE1:Hg19::chr10:28845345..28845346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:28845345..28845346,+ | |||
|coexpression_cluster_id=C1575 | |||
|description=CAGE_peak_at_chr10:28845345..28845346,+ | |description=CAGE_peak_at_chr10:28845345..28845346,+ | ||
|id=chr10:28845345..28845346,+ | |id=chr10:28845345..28845346,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.57e-26!140;CL:0000037!1.01e-24!172;CL:0000566!1.01e-24!172;CL:0000988!2.19e-22!182;CL:0002032!1.02e-21!165;CL:0000837!1.02e-21!165;CL:0002087!6.68e-21!119;CL:0002031!1.29e-20!124;CL:0000766!1.89e-16!76;CL:0002057!3.98e-15!42;CL:0000763!7.66e-15!112;CL:0000049!7.66e-15!112;CL:0000839!5.21e-14!70;CL:0002009!5.44e-14!65;CL:0000860!1.92e-13!45;CL:0002194!2.38e-13!63;CL:0000576!2.38e-13!63;CL:0000040!2.38e-13!63;CL:0000559!2.38e-13!63;CL:0000557!3.17e-13!71;CL:0000542!6.84e-07!53;CL:0000051!6.84e-07!53;CL:0000838!9.88e-07!52 | |ontology_enrichment_celltype=CL:0000738!1.57e-26!140;CL:0000037!1.01e-24!172;CL:0000566!1.01e-24!172;CL:0000988!2.19e-22!182;CL:0002032!1.02e-21!165;CL:0000837!1.02e-21!165;CL:0002087!6.68e-21!119;CL:0002031!1.29e-20!124;CL:0000766!1.89e-16!76;CL:0002057!3.98e-15!42;CL:0000763!7.66e-15!112;CL:0000049!7.66e-15!112;CL:0000839!5.21e-14!70;CL:0002009!5.44e-14!65;CL:0000860!1.92e-13!45;CL:0002194!2.38e-13!63;CL:0000576!2.38e-13!63;CL:0000040!2.38e-13!63;CL:0000559!2.38e-13!63;CL:0000557!3.17e-13!71;CL:0000542!6.84e-07!53;CL:0000051!6.84e-07!53;CL:0000838!9.88e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000576;5.79e-11;48!CL:0000860;6.72e-11;33!CL:0002057;6.72e-11;33!CL:0000473;8.82e-10;39!CL:0000234;8.82e-10;39!CL:0000766;5.23e-09;69!CL:0002087;6.79e-08;104!CL:0000738;7.87e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.99e-30,136;CL:0000037,1.05e-26,168;CL:0000988,4.89e-25,177;CL:0002087,1.64e-24,115;CL:0002031,8.98e-24,120;CL:0002032,2.13e-23,161;CL:0000837,2.13e-23,161;CL:0000766,3.50e-20,72;CL:0002009,7.24e-18,61;CL:0000839,2.32e-17,66;CL:0000473,2.84e-17,48;CL:0000234,2.84e-17,48;CL:0002194,3.95e-17,59;CL:0000576,3.95e-17,59;CL:0000040,3.95e-17,59;CL:0000559,3.95e-17,59;CL:0000860,7.72e-17,42;CL:0002057,7.72e-17,42;CL:0000557,1.24e-16,67;CL:0000763,2.10e-16,108;CL:0000049,2.10e-16,108;CL:0000542,5.54e-07,53;CL:0000051,5.54e-07,53;CL:0000838,8.27e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.95e-14!112;UBERON:0002390!4.56e-14!102;UBERON:0003061!4.56e-14!102;UBERON:0007023!2.85e-11!115;UBERON:0002371!1.04e-10!80;UBERON:0002405!1.63e-09!115;UBERON:0001474!2.47e-09!86;UBERON:0001049!4.07e-07!57;UBERON:0005068!4.07e-07!57;UBERON:0006241!4.07e-07!57;UBERON:0007135!4.07e-07!57 | |ontology_enrichment_uberon=UBERON:0002193!2.95e-14!112;UBERON:0002390!4.56e-14!102;UBERON:0003061!4.56e-14!102;UBERON:0007023!2.85e-11!115;UBERON:0002371!1.04e-10!80;UBERON:0002405!1.63e-09!115;UBERON:0001474!2.47e-09!86;UBERON:0001049!4.07e-07!57;UBERON:0005068!4.07e-07!57;UBERON:0006241!4.07e-07!57;UBERON:0007135!4.07e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.56e-18,108;UBERON:0002390,9.65e-18,98;UBERON:0003061,9.65e-18,98;UBERON:0002405,2.68e-14,93;UBERON:0002371,5.31e-14,76;UBERON:0001474,3.31e-12,82;UBERON:0007023,1.65e-10,114;UBERON:0004765,5.23e-09,90;UBERON:0001434,5.48e-07,100;UBERON:0001049,6.85e-07,56;UBERON:0005068,6.85e-07,56;UBERON:0006241,6.85e-07,56;UBERON:0007135,6.85e-07,56 | |||
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| ||
|short_description=p@chr10:28845345..28845346,+ | |short_description=p@chr10:28845345..28845346,+ | ||
}} | }} |
Latest revision as of 13:00, 23 July 2015
Short description: | p@chr10:28845345..28845346, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28845345..28845346, + |
Coexpression cluster: | C1575_Neutrophils_CD19_Natural_CD8_CD14_CD4_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.99e-30 | 136 |
hematopoietic stem cell | 1.05e-26 | 168 |
hematopoietic cell | 4.89e-25 | 177 |
nongranular leukocyte | 1.64e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.98e-24 | 120 |
hematopoietic oligopotent progenitor cell | 2.13e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-23 | 161 |
myeloid leukocyte | 3.50e-20 | 72 |
macrophage dendritic cell progenitor | 7.24e-18 | 61 |
myeloid lineage restricted progenitor cell | 2.32e-17 | 66 |
defensive cell | 2.84e-17 | 48 |
phagocyte | 2.84e-17 | 48 |
monopoietic cell | 3.95e-17 | 59 |
monocyte | 3.95e-17 | 59 |
monoblast | 3.95e-17 | 59 |
promonocyte | 3.95e-17 | 59 |
classical monocyte | 7.72e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.72e-17 | 42 |
granulocyte monocyte progenitor cell | 1.24e-16 | 67 |
myeloid cell | 2.10e-16 | 108 |
common myeloid progenitor | 2.10e-16 | 108 |
lymphocyte | 5.54e-07 | 53 |
common lymphoid progenitor | 5.54e-07 | 53 |
lymphoid lineage restricted progenitor cell | 8.27e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.56e-18 | 108 |
hematopoietic system | 9.65e-18 | 98 |
blood island | 9.65e-18 | 98 |
immune system | 2.68e-14 | 93 |
bone marrow | 5.31e-14 | 76 |
bone element | 3.31e-12 | 82 |
adult organism | 1.65e-10 | 114 |
skeletal element | 5.23e-09 | 90 |
skeletal system | 5.48e-07 | 100 |
neural tube | 6.85e-07 | 56 |
neural rod | 6.85e-07 | 56 |
future spinal cord | 6.85e-07 | 56 |
neural keel | 6.85e-07 | 56 |