FFCP PHASE1:Hg19::chr10:61636343..61636347,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:61636343..61636347,-
|short_description=p@chr10:61636343..61636347,-
|description=CAGE_peak_at_chr10:61636343..61636347,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:61636343..61636347,- | |||
|description=CAGE_peak_at_chr10:61636343..61636347,- | |||
|id=chr10:61636343..61636347,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.02e-07,52;CL:0000542,1.99e-07,53;CL:0000051,1.99e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.68e-08!51;DOID:0060083!4.68e-08!51;DOID:0050686!1.33e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-12!115;UBERON:0003080!3.33e-12!42;UBERON:0002780!3.64e-12!41;UBERON:0001890!3.64e-12!41;UBERON:0006240!3.64e-12!41;UBERON:0001049!1.67e-10!57;UBERON:0005068!1.67e-10!57;UBERON:0006241!1.67e-10!57;UBERON:0007135!1.67e-10!57;UBERON:0002020!2.25e-10!34;UBERON:0003528!2.25e-10!34;UBERON:0002791!7.50e-10!33;UBERON:0001893!8.35e-10!34;UBERON:0001869!1.28e-09!32;UBERON:0000955!1.33e-09!69;UBERON:0006238!1.33e-09!69;UBERON:0001017!1.66e-09!82;UBERON:0002616!3.00e-09!59;UBERON:0002346!6.85e-09!90;UBERON:0005743!1.28e-08!86;UBERON:0003075!5.69e-08!86;UBERON:0007284!5.69e-08!86;UBERON:0000073!7.86e-08!94;UBERON:0001016!7.86e-08!94;UBERON:0000956!5.54e-07!25;UBERON:0000203!5.54e-07!25;UBERON:0003056!5.59e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.57e-09;41!UBERON:0001890;1.57e-09;41!UBERON:0002791;3.24e-09;32!UBERON:0001869;3.45e-08;32!UBERON:0003528;5.86e-08;34!UBERON:0002020;5.86e-08;34!UBERON:0001893;3.92e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.03e-11,41;UBERON:0001890,1.03e-11,41;UBERON:0003080,1.03e-11,41;UBERON:0006240,1.03e-11,41;UBERON:0002791,9.45e-10,32;UBERON:0003528,1.34e-09,34;UBERON:0002020,1.34e-09,34;UBERON:0001893,8.28e-09,34;UBERON:0001869,1.12e-08,32;UBERON:0000073,1.21e-08,53;UBERON:0002616,1.21e-08,53;UBERON:0001049,1.45e-08,56;UBERON:0005068,1.45e-08,56;UBERON:0006241,1.45e-08,56;UBERON:0007135,1.45e-08,56;UBERON:0007023,3.41e-08,114;UBERON:0002346,2.17e-07,86;UBERON:0000955,2.72e-07,68;UBERON:0006238,2.72e-07,68;UBERON:0009663,3.12e-07,7;UBERON:0003056,3.88e-07,61;UBERON:0002420,7.95e-07,9;UBERON:0007245,7.95e-07,9;UBERON:0010009,7.95e-07,9;UBERON:0010011,7.95e-07,9;UBERON:0000454,7.95e-07,9 | |||
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| ||
|short_description=p@chr10:61636343..61636347,- | |||
}} | }} |
Latest revision as of 14:25, 23 July 2015
Short description: | p@chr10:61636343..61636347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:61636343..61636347, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.02e-07 | 52 |
lymphocyte | 1.99e-07 | 53 |
common lymphoid progenitor | 1.99e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.03e-11 | 41 |
forebrain | 1.03e-11 | 41 |
anterior neural tube | 1.03e-11 | 41 |
future forebrain | 1.03e-11 | 41 |
regional part of telencephalon | 9.45e-10 | 32 |
brain grey matter | 1.34e-09 | 34 |
gray matter | 1.34e-09 | 34 |
telencephalon | 8.28e-09 | 34 |
cerebral hemisphere | 1.12e-08 | 32 |
regional part of nervous system | 1.21e-08 | 53 |
regional part of brain | 1.21e-08 | 53 |
neural tube | 1.45e-08 | 56 |
neural rod | 1.45e-08 | 56 |
future spinal cord | 1.45e-08 | 56 |
neural keel | 1.45e-08 | 56 |
adult organism | 3.41e-08 | 114 |
neurectoderm | 2.17e-07 | 86 |
brain | 2.72e-07 | 68 |
future brain | 2.72e-07 | 68 |
telencephalic nucleus | 3.12e-07 | 7 |
pre-chordal neural plate | 3.88e-07 | 61 |
basal ganglion | 7.95e-07 | 9 |
nuclear complex of neuraxis | 7.95e-07 | 9 |
aggregate regional part of brain | 7.95e-07 | 9 |
collection of basal ganglia | 7.95e-07 | 9 |
cerebral subcortex | 7.95e-07 | 9 |