FFCP PHASE1:Hg19::chr10:6424336..6424348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6424336..6424348,+ | |||
|description=CAGE_peak_at_chr10:6424336..6424348,+ | |description=CAGE_peak_at_chr10:6424336..6424348,+ | ||
|id=chr10:6424336..6424348,+ | |id=chr10:6424336..6424348,+ | ||
|ontology_enrichment_celltype=CL:0000766!6.81e-16!76;CL:0002194!2.29e-14!63;CL:0000576!2.29e-14!63;CL:0000040!2.29e-14!63;CL:0000559!2.29e-14!63;CL:0002009!1.00e-13!65;CL:0000738!1.62e-13!140;CL:0000839!2.72e-12!70;CL:0000557!4.97e-12!71;CL:0002087!2.74e-10!119;CL:0000763!5.25e-10!112;CL:0000049!5.25e-10!112;CL:0002057!6.61e-10!42;CL:0000037!7.67e-10!172;CL:0000566!7.67e-10!172;CL:0000860!5.61e-09!45;CL:0002031!8.55e-09!124;CL:0000988!9.08e-09!182;CL:0000784!1.85e-08!3;CL:0002032!2.13e-08!165;CL:0000837!2.13e-08!165;CL:0002619!3.12e-08!3 | |ontology_enrichment_celltype=CL:0000766!6.81e-16!76;CL:0002194!2.29e-14!63;CL:0000576!2.29e-14!63;CL:0000040!2.29e-14!63;CL:0000559!2.29e-14!63;CL:0002009!1.00e-13!65;CL:0000738!1.62e-13!140;CL:0000839!2.72e-12!70;CL:0000557!4.97e-12!71;CL:0002087!2.74e-10!119;CL:0000763!5.25e-10!112;CL:0000049!5.25e-10!112;CL:0002057!6.61e-10!42;CL:0000037!7.67e-10!172;CL:0000566!7.67e-10!172;CL:0000860!5.61e-09!45;CL:0002031!8.55e-09!124;CL:0000988!9.08e-09!182;CL:0000784!1.85e-08!3;CL:0002032!2.13e-08!165;CL:0000837!2.13e-08!165;CL:0002619!3.12e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.86e-46;3!CL:0002619;2.17e-21;3!CL:0000451;4.03e-13;10!CL:0000235;3.39e-11;6!CL:0000771;3.43e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.87e-46,3;CL:0002619,1.76e-21,3;CL:0000451,4.29e-13,10;CL:0000766,6.99e-13,72;CL:0002194,4.07e-12,59;CL:0000576,4.07e-12,59;CL:0000040,4.07e-12,59;CL:0000559,4.07e-12,59;CL:0002009,1.04e-11,61;CL:0000235,4.16e-11,6;CL:0000839,8.39e-11,66;CL:0000557,1.23e-10,67;CL:0000738,2.87e-10,136;CL:0000771,3.43e-09,2;CL:0000763,2.11e-08,108;CL:0000049,2.11e-08,108;CL:0000037,3.94e-08,168;CL:0000988,1.15e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-26!57;UBERON:0005068!1.40e-26!57;UBERON:0006241!1.40e-26!57;UBERON:0007135!1.40e-26!57;UBERON:0002616!2.10e-21!59;UBERON:0007023!1.97e-20!115;UBERON:0002780!9.31e-20!41;UBERON:0001890!9.31e-20!41;UBERON:0006240!9.31e-20!41;UBERON:0005743!1.04e-19!86;UBERON:0001017!1.13e-19!82;UBERON:0003080!3.76e-19!42;UBERON:0003075!1.25e-18!86;UBERON:0007284!1.25e-18!86;UBERON:0000955!2.54e-18!69;UBERON:0006238!2.54e-18!69;UBERON:0001893!5.69e-18!34;UBERON:0002020!8.41e-18!34;UBERON:0003528!8.41e-18!34;UBERON:0002346!2.11e-17!90;UBERON:0000073!5.41e-17!94;UBERON:0001016!5.41e-17!94;UBERON:0002791!1.38e-16!33;UBERON:0002619!2.19e-15!22;UBERON:0001869!6.53e-15!32;UBERON:0001950!1.13e-14!20;UBERON:0000956!3.39e-13!25;UBERON:0000203!3.39e-13!25;UBERON:0003056!1.15e-12!61;UBERON:0000153!1.23e-11!129;UBERON:0007811!1.23e-11!129;UBERON:0002371!5.08e-11!80;UBERON:0001474!7.09e-11!86;UBERON:0002390!1.58e-10!102;UBERON:0003061!1.58e-10!102;UBERON:0000033!4.45e-10!123;UBERON:0002298!1.01e-09!8;UBERON:0002193!1.02e-09!112;UBERON:0002405!2.98e-09!115;UBERON:0004765!4.53e-09!101;UBERON:0001434!4.53e-09!101;UBERON:0003076!1.32e-08!15;UBERON:0003057!1.32e-08!15;UBERON:0000988!1.77e-07!3;UBERON:0006331!2.02e-07!3;UBERON:0000349!2.30e-07!5;UBERON:0004121!5.52e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!1.40e-26!57;UBERON:0005068!1.40e-26!57;UBERON:0006241!1.40e-26!57;UBERON:0007135!1.40e-26!57;UBERON:0002616!2.10e-21!59;UBERON:0007023!1.97e-20!115;UBERON:0002780!9.31e-20!41;UBERON:0001890!9.31e-20!41;UBERON:0006240!9.31e-20!41;UBERON:0005743!1.04e-19!86;UBERON:0001017!1.13e-19!82;UBERON:0003080!3.76e-19!42;UBERON:0003075!1.25e-18!86;UBERON:0007284!1.25e-18!86;UBERON:0000955!2.54e-18!69;UBERON:0006238!2.54e-18!69;UBERON:0001893!5.69e-18!34;UBERON:0002020!8.41e-18!34;UBERON:0003528!8.41e-18!34;UBERON:0002346!2.11e-17!90;UBERON:0000073!5.41e-17!94;UBERON:0001016!5.41e-17!94;UBERON:0002791!1.38e-16!33;UBERON:0002619!2.19e-15!22;UBERON:0001869!6.53e-15!32;UBERON:0001950!1.13e-14!20;UBERON:0000956!3.39e-13!25;UBERON:0000203!3.39e-13!25;UBERON:0003056!1.15e-12!61;UBERON:0000153!1.23e-11!129;UBERON:0007811!1.23e-11!129;UBERON:0002371!5.08e-11!80;UBERON:0001474!7.09e-11!86;UBERON:0002390!1.58e-10!102;UBERON:0003061!1.58e-10!102;UBERON:0000033!4.45e-10!123;UBERON:0002298!1.01e-09!8;UBERON:0002193!1.02e-09!112;UBERON:0002405!2.98e-09!115;UBERON:0004765!4.53e-09!101;UBERON:0001434!4.53e-09!101;UBERON:0003076!1.32e-08!15;UBERON:0003057!1.32e-08!15;UBERON:0000988!1.77e-07!3;UBERON:0006331!2.02e-07!3;UBERON:0000349!2.30e-07!5;UBERON:0004121!5.52e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;1.78e-16;1!UBERON:0011215;1.78e-16;1!UBERON:0001018;1.78e-16;1!UBERON:0002473;1.78e-16;1!UBERON:0005340;1.78e-16;1!UBERON:0003544;1.78e-16;1!UBERON:0005970;1.78e-16;1!UBERON:0002316;1.78e-16;1!UBERON:0001020;1.78e-16;1!UBERON:0002437;1.78e-16;1!UBERON:0002148;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2!UBERON:0006331;6.67e-09;2!UBERON:0009662;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.41e-16,1;UBERON:0011215,1.41e-16,1;UBERON:0001018,1.41e-16,1;UBERON:0002473,1.41e-16,1;UBERON:0005340,1.41e-16,1;UBERON:0003544,1.41e-16,1;UBERON:0005970,1.41e-16,1;UBERON:0002316,1.41e-16,1;UBERON:0001020,1.41e-16,1;UBERON:0002437,1.41e-16,1;UBERON:0002371,2.45e-09,76;UBERON:0005162,5.94e-09,2;UBERON:0000122,5.94e-09,2;UBERON:0002148,8.09e-09,2;UBERON:0006331,8.09e-09,2;UBERON:0009662,8.09e-09,2;UBERON:0001474,1.26e-08,82;UBERON:0004765,8.03e-08,90;UBERON:0002405,1.48e-07,93;UBERON:0002390,3.80e-07,98;UBERON:0003061,3.80e-07,98;UBERON:0001434,5.39e-07,100 | |||
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| ||
|short_description=p@chr10:6424336..6424348,+ | |short_description=p@chr10:6424336..6424348,+ | ||
}} | }} |
Latest revision as of 14:39, 23 July 2015
Short description: | p@chr10:6424336..6424348, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6424336..6424348, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.87e-46 | 3 |
adult endothelial progenitor cell | 1.76e-21 | 3 |
dendritic cell | 4.29e-13 | 10 |
myeloid leukocyte | 6.99e-13 | 72 |
monopoietic cell | 4.07e-12 | 59 |
monocyte | 4.07e-12 | 59 |
monoblast | 4.07e-12 | 59 |
promonocyte | 4.07e-12 | 59 |
macrophage dendritic cell progenitor | 1.04e-11 | 61 |
macrophage | 4.16e-11 | 6 |
myeloid lineage restricted progenitor cell | 8.39e-11 | 66 |
granulocyte monocyte progenitor cell | 1.23e-10 | 67 |
leukocyte | 2.87e-10 | 136 |
eosinophil | 3.43e-09 | 2 |
myeloid cell | 2.11e-08 | 108 |
common myeloid progenitor | 2.11e-08 | 108 |
hematopoietic stem cell | 3.94e-08 | 168 |
hematopoietic cell | 1.15e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.41e-16 | 1 |
central nervous system cell part cluster | 1.41e-16 | 1 |
axon tract | 1.41e-16 | 1 |
intercerebral commissure | 1.41e-16 | 1 |
dorsal telencephalic commissure | 1.41e-16 | 1 |
brain white matter | 1.41e-16 | 1 |
brain commissure | 1.41e-16 | 1 |
white matter | 1.41e-16 | 1 |
nervous system commissure | 1.41e-16 | 1 |
cerebral hemisphere white matter | 1.41e-16 | 1 |
bone marrow | 2.45e-09 | 76 |
multi cell component structure | 5.94e-09 | 2 |
neuron projection bundle | 5.94e-09 | 2 |
locus ceruleus | 8.09e-09 | 2 |
brainstem nucleus | 8.09e-09 | 2 |
hindbrain nucleus | 8.09e-09 | 2 |
bone element | 1.26e-08 | 82 |
skeletal element | 8.03e-08 | 90 |
immune system | 1.48e-07 | 93 |
hematopoietic system | 3.80e-07 | 98 |
blood island | 3.80e-07 | 98 |
skeletal system | 5.39e-07 | 100 |