FFCP PHASE1:Hg19::chr10:65467159..65467163,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:65467159..65467163,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:65467159..65467163,- | |||
|id=chr10:65467159..65467163,- | |||
|ontology_enrichment_celltype=CL:0002057!3.16e-57!42;CL:0000860!4.59e-55!45;CL:0002009!1.79e-39!65;CL:0002194!8.17e-37!63;CL:0000576!8.17e-37!63;CL:0000040!8.17e-37!63;CL:0000559!8.17e-37!63;CL:0000557!5.64e-35!71;CL:0000839!7.96e-32!70;CL:0000766!8.19e-32!76;CL:0000763!1.05e-20!112;CL:0000049!1.05e-20!112;CL:0002087!1.87e-19!119;CL:0000738!2.12e-18!140;CL:0002031!4.61e-17!124;CL:0000037!4.97e-13!172;CL:0000566!4.97e-13!172;CL:0002032!8.46e-12!165;CL:0000837!8.46e-12!165;CL:0000988!1.51e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-105;33!CL:0002057;1.23e-105;33!CL:0000473;3.95e-80;39!CL:0000234;3.95e-80;39!CL:0000576;3.77e-62;48!CL:0000766;1.76e-36;69!CL:0000763;4.44e-16;100!CL:0002087;2.39e-15;104!CL:0002393;2.18e-14;6!CL:0002397;2.18e-14;6!CL:0000738;8.53e-10;136!CL:0000136;7.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.02e-119,42;CL:0002057,4.02e-119,42;CL:0000473,1.55e-110,48;CL:0000234,1.55e-110,48;CL:0002194,3.12e-87,59;CL:0000576,3.12e-87,59;CL:0000040,3.12e-87,59;CL:0000559,3.12e-87,59;CL:0002009,3.18e-84,61;CL:0000839,1.73e-77,66;CL:0000557,2.92e-76,67;CL:0000766,1.27e-70,72;CL:0000763,2.79e-45,108;CL:0000049,2.79e-45,108;CL:0002087,3.55e-42,115;CL:0002031,3.53e-40,120;CL:0000738,9.20e-35,136;CL:0002032,1.95e-28,161;CL:0000837,1.95e-28,161;CL:0000037,5.34e-27,168;CL:0000988,2.57e-25,177;CL:0000134,1.65e-13,354;CL:0002320,4.05e-13,361;CL:0000219,9.71e-12,386;CL:0000048,4.76e-10,427;CL:0000723,8.15e-10,433;CL:0002393,9.46e-10,9;CL:0002397,9.46e-10,9;CL:0000034,1.63e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-82;42!CL:0000049;2.28e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.67e-29!80;UBERON:0002390!1.65e-26!102;UBERON:0003061!1.65e-26!102;UBERON:0001474!1.67e-26!86;UBERON:0002193!4.15e-24!112;UBERON:0004765!3.95e-23!101;UBERON:0001434!3.95e-23!101;UBERON:0002405!1.41e-21!115;UBERON:0002204!7.37e-11!167;UBERON:0003081!2.86e-10!216;UBERON:0000062!1.71e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-66,76;UBERON:0001474,2.21e-61,82;UBERON:0004765,1.89e-55,90;UBERON:0002405,1.74e-53,93;UBERON:0002390,1.78e-50,98;UBERON:0003061,1.78e-50,98;UBERON:0001434,2.36e-49,100;UBERON:0002193,2.79e-45,108;UBERON:0002204,3.39e-27,167;UBERON:0003081,2.75e-21,203;UBERON:0002384,1.39e-12,371;UBERON:0000926,1.76e-11,315;UBERON:0004120,1.76e-11,315;UBERON:0006603,1.76e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0,0.928896739896456,0,0,0,0,0,0,4.43196326825502,1.40381113229099,1.95309783644267,0,0,0,0.726991193897824,0.377875943688809,1.21292030593908,1.85943229524548,0.822335776043652,2.78735733805593,4.02769349251011,3.84241059793651,13.0065226438722,18.2715210790408,15.4916324060118,8.12558919566051,1.12945403725563,0.545812300115692,2.9214052977861,15.3041946185451,30.809186599305,31.327519164153,0.329851300186716,0.997318288108159,1.27867425159808,4.35313857942876,1.70215567407342,1.24564449799115,5.27622197039161,4.17186334736161,11.5110087693712,2.42159801053347,8.10210799172642,11.3926459478718,0,1.27562579979026,0.209658645508376,1.57260083605093,1.20141514273205,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.828851746593443,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0.60129367765797,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0,0,0.288109595976299,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.674921674654501,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,1.63205341010842,1.2534494701135,5.82056595850577,4.26234419922746,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686520205190771,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr10:65467159..65467163,- | |||
}} |
Latest revision as of 14:48, 23 July 2015
Short description: | p@chr10:65467159..65467163, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:65467159..65467163, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.02e-119 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.02e-119 | 42 |
defensive cell | 1.55e-110 | 48 |
phagocyte | 1.55e-110 | 48 |
monopoietic cell | 3.12e-87 | 59 |
monocyte | 3.12e-87 | 59 |
monoblast | 3.12e-87 | 59 |
promonocyte | 3.12e-87 | 59 |
macrophage dendritic cell progenitor | 3.18e-84 | 61 |
myeloid lineage restricted progenitor cell | 1.73e-77 | 66 |
granulocyte monocyte progenitor cell | 2.92e-76 | 67 |
myeloid leukocyte | 1.27e-70 | 72 |
myeloid cell | 2.79e-45 | 108 |
common myeloid progenitor | 2.79e-45 | 108 |
nongranular leukocyte | 3.55e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 3.53e-40 | 120 |
leukocyte | 9.20e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.95e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-28 | 161 |
hematopoietic stem cell | 5.34e-27 | 168 |
hematopoietic cell | 2.57e-25 | 177 |
mesenchymal cell | 1.65e-13 | 354 |
connective tissue cell | 4.05e-13 | 361 |
motile cell | 9.71e-12 | 386 |
multi fate stem cell | 4.76e-10 | 427 |
somatic stem cell | 8.15e-10 | 433 |
intermediate monocyte | 9.46e-10 | 9 |
CD14-positive, CD16-positive monocyte | 9.46e-10 | 9 |
stem cell | 1.63e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-66 | 76 |
bone element | 2.21e-61 | 82 |
skeletal element | 1.89e-55 | 90 |
immune system | 1.74e-53 | 93 |
hematopoietic system | 1.78e-50 | 98 |
blood island | 1.78e-50 | 98 |
skeletal system | 2.36e-49 | 100 |
hemolymphoid system | 2.79e-45 | 108 |
musculoskeletal system | 3.39e-27 | 167 |
lateral plate mesoderm | 2.75e-21 | 203 |
connective tissue | 1.39e-12 | 371 |
mesoderm | 1.76e-11 | 315 |
mesoderm-derived structure | 1.76e-11 | 315 |
presumptive mesoderm | 1.76e-11 | 315 |