FFCP PHASE1:Hg19::chr10:6625605..6625634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000414894_5end | |association_with_transcript=-3bp_to_ENST00000414894_5end | ||
|cluster_id=chr10:6625605..6625634,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_ENST00000414894_5end | |description=CAGE_peak_1_at_ENST00000414894_5end | ||
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|ontology_enrichment_celltype=CL:0000791!7.68e-27!18;CL:0000789!7.68e-27!18;CL:0002420!7.68e-27!18;CL:0002419!7.68e-27!18;CL:0000790!7.68e-27!18;CL:0000738!1.89e-25!140;CL:0002087!6.04e-24!119;CL:0000037!4.52e-21!172;CL:0000566!4.52e-21!172;CL:0002031!8.90e-20!124;CL:0000988!8.79e-19!182;CL:0002032!4.05e-18!165;CL:0000837!4.05e-18!165;CL:0000084!1.69e-17!25;CL:0000827!1.69e-17!25;CL:0000625!4.11e-17!11;CL:0000838!3.61e-12!52;CL:0000542!8.64e-12!53;CL:0000051!8.64e-12!53;CL:0000766!4.44e-11!76;CL:0002194!3.75e-10!63;CL:0000576!3.75e-10!63;CL:0000040!3.75e-10!63;CL:0000559!3.75e-10!63;CL:0000624!4.00e-10!6;CL:0002057!6.46e-10!42;CL:0002009!1.33e-09!65;CL:0000839!4.34e-09!70;CL:0000860!7.44e-09!45;CL:0000557!7.49e-09!71;CL:0000763!6.58e-08!112;CL:0000049!6.58e-08!112 | |ontology_enrichment_celltype=CL:0000791!7.68e-27!18;CL:0000789!7.68e-27!18;CL:0002420!7.68e-27!18;CL:0002419!7.68e-27!18;CL:0000790!7.68e-27!18;CL:0000738!1.89e-25!140;CL:0002087!6.04e-24!119;CL:0000037!4.52e-21!172;CL:0000566!4.52e-21!172;CL:0002031!8.90e-20!124;CL:0000988!8.79e-19!182;CL:0002032!4.05e-18!165;CL:0000837!4.05e-18!165;CL:0000084!1.69e-17!25;CL:0000827!1.69e-17!25;CL:0000625!4.11e-17!11;CL:0000838!3.61e-12!52;CL:0000542!8.64e-12!53;CL:0000051!8.64e-12!53;CL:0000766!4.44e-11!76;CL:0002194!3.75e-10!63;CL:0000576!3.75e-10!63;CL:0000040!3.75e-10!63;CL:0000559!3.75e-10!63;CL:0000624!4.00e-10!6;CL:0002057!6.46e-10!42;CL:0002009!1.33e-09!65;CL:0000839!4.34e-09!70;CL:0000860!7.44e-09!45;CL:0000557!7.49e-09!71;CL:0000763!6.58e-08!112;CL:0000049!6.58e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.08e-48;18!CL:0000789;7.08e-48;18!CL:0002419;7.08e-48;18!CL:0000084;5.39e-33;25!CL:0000625;5.33e-30;11!CL:0000624;3.40e-17;6!CL:0000542;8.80e-12;53!CL:0000898;1.92e-09;3!CL:0000226;8.19e-09;3!CL:0000842;8.19e-09;3!CL:0000623;1.22e-08;3!CL:0002087;6.04e-07;104!CL:0000815;7.90e-07;2!CL:0000792;7.90e-07;2!CL:0002677;7.90e-07;2 | |ontology_enrichment_celltype_v019=CL:0000791;7.08e-48;18!CL:0000789;7.08e-48;18!CL:0002419;7.08e-48;18!CL:0000084;5.39e-33;25!CL:0000625;5.33e-30;11!CL:0000624;3.40e-17;6!CL:0000542;8.80e-12;53!CL:0000898;1.92e-09;3!CL:0000226;8.19e-09;3!CL:0000842;8.19e-09;3!CL:0000623;1.22e-08;3!CL:0002087;6.04e-07;104!CL:0000815;7.90e-07;2!CL:0000792;7.90e-07;2!CL:0002677;7.90e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.19e-48,18;CL:0000789,7.19e-48,18;CL:0002420,7.19e-48,18;CL:0002419,7.19e-48,18;CL:0000790,7.19e-48,18;CL:0000084,5.45e-33,25;CL:0000827,5.45e-33,25;CL:0000625,5.42e-30,11;CL:0000838,2.52e-22,52;CL:0000542,8.80e-22,53;CL:0000051,8.80e-22,53;CL:0000624,3.41e-17,6;CL:0000738,8.35e-17,136;CL:0002087,1.65e-16,115;CL:0000037,1.05e-12,168;CL:0002031,4.49e-12,120;CL:0000988,1.37e-11,177;CL:0002032,4.69e-10,161;CL:0000837,4.69e-10,161;CL:0000898,1.89e-09,3;CL:0000226,8.30e-09,3;CL:0000842,8.30e-09,3;CL:0000623,1.21e-08,3;CL:0000825,1.21e-08,3;CL:0000815,7.90e-07,2;CL:0000792,7.90e-07,2;CL:0002677,7.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.08e-48;18!CL:0000051;8.80e-12;53 | |ontology_enrichment_development_v019=CL:0000790;7.08e-48;18!CL:0000051;8.80e-12;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.93e-18!102;UBERON:0003061!3.93e-18!102;UBERON:0002193!2.96e-17!112;UBERON:0000178!5.03e-13!15;UBERON:0000179!5.03e-13!15;UBERON:0000463!5.03e-13!15;UBERON:0007023!3.36e-11!115;UBERON:0002405!9.57e-08!115;UBERON:0002371!5.12e-07!80;UBERON:0004177!6.32e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!3.93e-18!102;UBERON:0003061!3.93e-18!102;UBERON:0002193!2.96e-17!112;UBERON:0000178!5.03e-13!15;UBERON:0000179!5.03e-13!15;UBERON:0000463!5.03e-13!15;UBERON:0007023!3.36e-11!115;UBERON:0002405!9.57e-08!115;UBERON:0002371!5.12e-07!80;UBERON:0004177!6.32e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-23;15!UBERON:0000179;1.41e-23;15!UBERON:0000463;1.41e-23;15!UBERON:0002390;8.06e-11;32!UBERON:0002193;7.86e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-23;15!UBERON:0000179;1.41e-23;15!UBERON:0000463;1.41e-23;15!UBERON:0002390;8.06e-11;32!UBERON:0002193;7.86e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.47e-23,15;UBERON:0000179,1.47e-23,15;UBERON:0000463,1.47e-23,15;UBERON:0002193,1.46e-07,108;UBERON:0002390,4.07e-07,98;UBERON:0003061,4.07e-07,98 | |||
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|short_description=p1@ENST00000414894 | |short_description=p1@ENST00000414894 | ||
}} | }} |
Latest revision as of 14:50, 23 July 2015
Short description: | p1@ENST00000414894 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000414894_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -3bp_to_ENST00000414894_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.19e-48 | 18 |
alpha-beta T cell | 7.19e-48 | 18 |
immature T cell | 7.19e-48 | 18 |
mature T cell | 7.19e-48 | 18 |
immature alpha-beta T cell | 7.19e-48 | 18 |
T cell | 5.45e-33 | 25 |
pro-T cell | 5.45e-33 | 25 |
CD8-positive, alpha-beta T cell | 5.42e-30 | 11 |
lymphoid lineage restricted progenitor cell | 2.52e-22 | 52 |
lymphocyte | 8.80e-22 | 53 |
common lymphoid progenitor | 8.80e-22 | 53 |
CD4-positive, alpha-beta T cell | 3.41e-17 | 6 |
leukocyte | 8.35e-17 | 136 |
nongranular leukocyte | 1.65e-16 | 115 |
hematopoietic stem cell | 1.05e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 4.49e-12 | 120 |
hematopoietic cell | 1.37e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.69e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.69e-10 | 161 |
naive T cell | 1.89e-09 | 3 |
single nucleate cell | 8.30e-09 | 3 |
mononuclear cell | 8.30e-09 | 3 |
natural killer cell | 1.21e-08 | 3 |
pro-NK cell | 1.21e-08 | 3 |
regulatory T cell | 7.90e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.90e-07 | 2 |
naive regulatory T cell | 7.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.47e-23 | 15 |
haemolymphatic fluid | 1.47e-23 | 15 |
organism substance | 1.47e-23 | 15 |
hemolymphoid system | 1.46e-07 | 108 |
hematopoietic system | 4.07e-07 | 98 |
blood island | 4.07e-07 | 98 |