FFCP PHASE1:Hg19::chr10:70850459..70850474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70850459..70850474,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:70850459..70850474,- | |description=CAGE_peak_at_chr10:70850459..70850474,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!3.64e-97!42;CL:0000860!3.69e-90!45;CL:0000766!2.68e-79!76;CL:0002194!4.80e-65!63;CL:0000576!4.80e-65!63;CL:0000040!4.80e-65!63;CL:0000559!4.80e-65!63;CL:0002009!7.92e-63!65;CL:0000839!7.87e-58!70;CL:0000557!6.49e-57!71;CL:0000738!3.62e-56!140;CL:0000763!3.83e-51!112;CL:0000049!3.83e-51!112;CL:0002087!1.10e-44!119;CL:0000037!5.37e-44!172;CL:0000566!5.37e-44!172;CL:0000988!4.60e-41!182;CL:0002032!1.30e-37!165;CL:0000837!1.30e-37!165;CL:0002031!1.64e-35!124;CL:0000094!9.31e-24!8;CL:0000134!3.77e-17!358;CL:0000081!5.15e-17!11;CL:0002320!1.25e-16!365;CL:0002393!6.56e-16!9;CL:0002397!6.56e-16!9;CL:0000219!8.46e-15!390;CL:0000034!8.59e-13!444;CL:0000048!1.32e-12!430;CL:0000842!1.45e-12!3;CL:0000767!2.07e-12!3;CL:0000723!2.71e-12!436;CL:0000224!1.54e-09!4;CL:0000771!1.82e-09!2;CL:0000063!9.22e-07!578 | |ontology_enrichment_celltype=CL:0002057!3.64e-97!42;CL:0000860!3.69e-90!45;CL:0000766!2.68e-79!76;CL:0002194!4.80e-65!63;CL:0000576!4.80e-65!63;CL:0000040!4.80e-65!63;CL:0000559!4.80e-65!63;CL:0002009!7.92e-63!65;CL:0000839!7.87e-58!70;CL:0000557!6.49e-57!71;CL:0000738!3.62e-56!140;CL:0000763!3.83e-51!112;CL:0000049!3.83e-51!112;CL:0002087!1.10e-44!119;CL:0000037!5.37e-44!172;CL:0000566!5.37e-44!172;CL:0000988!4.60e-41!182;CL:0002032!1.30e-37!165;CL:0000837!1.30e-37!165;CL:0002031!1.64e-35!124;CL:0000094!9.31e-24!8;CL:0000134!3.77e-17!358;CL:0000081!5.15e-17!11;CL:0002320!1.25e-16!365;CL:0002393!6.56e-16!9;CL:0002397!6.56e-16!9;CL:0000219!8.46e-15!390;CL:0000034!8.59e-13!444;CL:0000048!1.32e-12!430;CL:0000842!1.45e-12!3;CL:0000767!2.07e-12!3;CL:0000723!2.71e-12!436;CL:0000224!1.54e-09!4;CL:0000771!1.82e-09!2;CL:0000063!9.22e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.83e-57;33!CL:0002057;5.83e-57;33!CL:0000473;1.58e-39;39!CL:0000234;1.58e-39;39!CL:0000576;1.42e-34;48!CL:0000766;3.84e-29;69!CL:0000094;2.67e-20;8!CL:0002393;1.03e-18;6!CL:0002397;1.03e-18;6!CL:0002087;2.10e-15;104!CL:0000081;9.87e-15;11!CL:0000763;1.42e-14;100!CL:0000771;1.52e-14;2!CL:0000226;9.17e-10;3!CL:0000842;9.17e-10;3!CL:0000767;1.74e-09;3!CL:0000738;1.19e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;5.83e-57;33!CL:0002057;5.83e-57;33!CL:0000473;1.58e-39;39!CL:0000234;1.58e-39;39!CL:0000576;1.42e-34;48!CL:0000766;3.84e-29;69!CL:0000094;2.67e-20;8!CL:0002393;1.03e-18;6!CL:0002397;1.03e-18;6!CL:0002087;2.10e-15;104!CL:0000081;9.87e-15;11!CL:0000763;1.42e-14;100!CL:0000771;1.52e-14;2!CL:0000226;9.17e-10;3!CL:0000842;9.17e-10;3!CL:0000767;1.74e-09;3!CL:0000738;1.19e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.68e-73,42;CL:0002057,2.68e-73,42;CL:0000473,1.26e-63,48;CL:0000234,1.26e-63,48;CL:0000766,3.61e-62,72;CL:0002194,4.46e-50,59;CL:0000576,4.46e-50,59;CL:0000040,4.46e-50,59;CL:0000559,4.46e-50,59;CL:0002009,2.50e-48,61;CL:0000839,2.06e-44,66;CL:0000557,1.07e-43,67;CL:0000763,4.07e-40,108;CL:0000049,4.07e-40,108;CL:0000738,2.54e-36,136;CL:0002087,6.28e-29,115;CL:0000037,1.54e-28,168;CL:0000988,7.50e-27,177;CL:0002032,1.88e-25,161;CL:0000837,1.88e-25,161;CL:0002031,1.04e-22,120;CL:0000094,2.22e-20,8;CL:0000081,8.65e-15,11;CL:0000771,1.47e-14,2;CL:0002393,1.61e-12,9;CL:0002397,1.61e-12,9;CL:0000134,5.60e-11,354;CL:0002320,1.15e-10,361;CL:0000226,8.58e-10,3;CL:0000842,8.58e-10,3;CL:0000767,1.40e-09,3;CL:0000219,1.44e-09,386;CL:0000034,1.08e-08,441;CL:0000048,3.20e-08,427;CL:0000723,4.92e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.08e-53;42!CL:0000049;3.61e-10;108 | |ontology_enrichment_development_v019=CL:0002057;6.08e-53;42!CL:0000049;3.61e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-49!80;UBERON:0001474!1.07e-45!86;UBERON:0002390!3.45e-45!102;UBERON:0003061!3.45e-45!102;UBERON:0002193!1.99e-40!112;UBERON:0004765!8.80e-38!101;UBERON:0001434!8.80e-38!101;UBERON:0002405!3.06e-32!115;UBERON:0002204!9.20e-20!167;UBERON:0003081!3.64e-18!216;UBERON:0002384!6.37e-16!375 | |ontology_enrichment_uberon=UBERON:0002371!1.10e-49!80;UBERON:0001474!1.07e-45!86;UBERON:0002390!3.45e-45!102;UBERON:0003061!3.45e-45!102;UBERON:0002193!1.99e-40!112;UBERON:0004765!8.80e-38!101;UBERON:0001434!8.80e-38!101;UBERON:0002405!3.06e-32!115;UBERON:0002204!9.20e-20!167;UBERON:0003081!3.64e-18!216;UBERON:0002384!6.37e-16!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.20e-38,76;UBERON:0001474,4.80e-35,82;UBERON:0002390,1.16e-34,98;UBERON:0003061,1.16e-34,98;UBERON:0004765,1.35e-31,90;UBERON:0002193,4.50e-31,108;UBERON:0002405,1.88e-30,93;UBERON:0001434,4.76e-28,100;UBERON:0002204,3.69e-15,167;UBERON:0003081,1.72e-14,203;UBERON:0002384,3.05e-10,371;UBERON:0000926,1.03e-07,315;UBERON:0004120,1.03e-07,315;UBERON:0006603,1.03e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,0.309632246632152,0,0,0,0,0,0,18.281848481552,28.8784004357004,11.9355978893719,0,0,0,0.145398238779565,0,0.485168122375632,1.39457422143411,0.411167888021826,1.23882548358041,2.01384674625505,1.7931249457037,2.60130452877444,16.2030469946211,5.80936215225443,2.70852973188684,0.376484679085209,0.545812300115692,1.79778787556068,22.9562919278177,10.269728866435,12.1474053901818,0,0.199463657621632,0,20.3146467040009,5.6738522469114,9.9651559839292,0,0,0.434377689410233,18.7673845816344,7.36555271975129,14.5572698222807,0,3.18906449947565,0.419317291016752,0,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,3.45142721309787,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,0.309632246632152,0,0,0,0,0,0,18.281848481552,28.8784004357004,11.9355978893719,0,0,0,0.145398238779565,0,0.485168122375632,1.39457422143411,0.411167888021826,1.23882548358041,2.01384674625505,1.7931249457037,2.60130452877444,16.2030469946211,5.80936215225443,2.70852973188684,0.376484679085209,0.545812300115692,1.79778787556068,22.9562919278177,10.269728866435,12.1474053901818,0,0.199463657621632,0,20.3146467040009,5.6738522469114,9.9651559839292,0,0,0.434377689410233,18.7673845816344,7.36555271975129,14.5572698222807,0,3.18906449947565,0.419317291016752,0,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,3.45142721309787,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:70850459..70850474,- | |short_description=p@chr10:70850459..70850474,- | ||
}} | }} |
Latest revision as of 15:03, 23 July 2015
Short description: | p@chr10:70850459..70850474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70850459..70850474, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.20e-38 | 76 |
bone element | 4.80e-35 | 82 |
hematopoietic system | 1.16e-34 | 98 |
blood island | 1.16e-34 | 98 |
skeletal element | 1.35e-31 | 90 |
hemolymphoid system | 4.50e-31 | 108 |
immune system | 1.88e-30 | 93 |
skeletal system | 4.76e-28 | 100 |
musculoskeletal system | 3.69e-15 | 167 |
lateral plate mesoderm | 1.72e-14 | 203 |
connective tissue | 3.05e-10 | 371 |
mesoderm | 1.03e-07 | 315 |
mesoderm-derived structure | 1.03e-07 | 315 |
presumptive mesoderm | 1.03e-07 | 315 |