FFCP PHASE1:Hg19::chr10:74057220..74057248,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:74057220..74057248,+
|short_description=p@chr10:74057220..74057248,+
|description=CAGE_peak_at_chr10:74057220..74057248,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:74057220..74057248,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:74057220..74057248,+ | |||
|id=chr10:74057220..74057248,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.64e-32!140;CL:0002087!1.07e-28!119;CL:0002031!4.49e-27!124;CL:0002057!5.21e-27!42;CL:0000988!7.42e-24!182;CL:0000037!1.35e-23!172;CL:0000566!1.35e-23!172;CL:0000860!8.35e-23!45;CL:0002032!9.81e-22!165;CL:0000837!9.81e-22!165;CL:0000766!2.40e-20!76;CL:0000134!5.35e-18!358;CL:0002320!1.09e-17!365;CL:0000003!2.24e-17!722;CL:0000048!1.48e-15!430;CL:0000219!1.98e-15!390;CL:0000723!2.80e-15!436;CL:0000839!8.09e-15!70;CL:0000034!1.15e-14!444;CL:0002371!1.15e-14!591;CL:0000557!2.72e-14!71;CL:0002194!3.20e-14!63;CL:0000576!3.20e-14!63;CL:0000040!3.20e-14!63;CL:0000559!3.20e-14!63;CL:0000063!1.74e-13!578;CL:0002009!2.62e-13!65;CL:0000838!3.16e-13!52;CL:0000542!6.39e-13!53;CL:0000051!6.39e-13!53;CL:0000144!3.12e-12!625;CL:0000012!3.26e-10!682;CL:0000763!6.10e-10!112;CL:0000049!6.10e-10!112;CL:0000548!1.34e-09!679;CL:0000004!1.34e-09!679;CL:0000255!1.34e-09!679;CL:0000115!3.98e-09!35;CL:0000945!1.97e-08!24;CL:0000826!1.97e-08!24;CL:0002139!4.73e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.13e-27;33!CL:0002057;4.13e-27;33!CL:0000576;6.31e-20;48!CL:0000473;4.28e-19;39!CL:0000234;4.28e-19;39!CL:0000766;6.94e-17;69!CL:0002087;1.41e-13;104!CL:0000738;7.79e-11;136!CL:0000945;4.04e-10;24!CL:0000542;3.12e-09;53!CL:0000115;2.61e-08;36!CL:0000094;2.79e-08;8!CL:0000763;1.53e-07;100!CL:0002139;4.65e-07;24!CL:0000236;5.79e-07;13!CL:0000988;9.10e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.63e-47,136;CL:0002087,3.51e-41,115;CL:0002031,3.95e-39,120;CL:0000037,2.56e-36,168;CL:0000860,3.66e-36,42;CL:0002057,3.66e-36,42;CL:0000988,1.39e-35,177;CL:0000766,1.43e-33,72;CL:0002032,2.71e-33,161;CL:0000837,2.71e-33,161;CL:0000473,1.43e-31,48;CL:0000234,1.43e-31,48;CL:0000839,1.49e-25,66;CL:0002194,5.41e-25,59;CL:0000576,5.41e-25,59;CL:0000040,5.41e-25,59;CL:0000559,5.41e-25,59;CL:0000557,7.80e-25,67;CL:0002009,1.73e-23,61;CL:0000763,1.16e-18,108;CL:0000049,1.16e-18,108;CL:0000134,4.84e-17,354;CL:0002320,3.21e-16,361;CL:0000219,4.94e-15,386;CL:0000838,1.92e-14,52;CL:0000542,6.84e-14,53;CL:0000051,6.84e-14,53;CL:0000048,7.36e-13,427;CL:0000723,2.13e-12,433;CL:0000034,3.13e-12,441;CL:0000115,1.79e-10,36;CL:0000945,1.97e-10,24;CL:0000826,1.97e-10,24;CL:0000094,3.07e-08,8;CL:0002139,5.32e-08,24;CL:0002393,5.98e-08,9;CL:0002397,5.98e-08,9;CL:0000236,1.05e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-26;42!CL:0000051;3.12e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.36e-21!112;UBERON:0002390!3.85e-19!102;UBERON:0003061!3.85e-19!102;UBERON:0002384!1.19e-16!375;UBERON:0003081!2.72e-16!216;UBERON:0002371!5.54e-16!80;UBERON:0002405!1.42e-15!115;UBERON:0001474!3.78e-14!86;UBERON:0004765!1.87e-12!101;UBERON:0001434!1.87e-12!101;UBERON:0002204!2.68e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.63e-30,108;UBERON:0002390,1.39e-29,98;UBERON:0003061,1.39e-29,98;UBERON:0002405,1.18e-28,93;UBERON:0002371,6.22e-27,76;UBERON:0001474,3.83e-23,82;UBERON:0003081,2.71e-21,203;UBERON:0004765,2.72e-21,90;UBERON:0001434,1.26e-18,100;UBERON:0002384,2.36e-15,371;UBERON:0002204,4.44e-08,167;UBERON:0000926,2.58e-07,315;UBERON:0004120,2.58e-07,315;UBERON:0006603,2.58e-07,315 | |||
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| ||
|short_description=p@chr10:74057220..74057248,+ | |||
}} | }} |
Latest revision as of 15:26, 23 July 2015
Short description: | p@chr10:74057220..74057248, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:74057220..74057248, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.63e-30 | 108 |
hematopoietic system | 1.39e-29 | 98 |
blood island | 1.39e-29 | 98 |
immune system | 1.18e-28 | 93 |
bone marrow | 6.22e-27 | 76 |
bone element | 3.83e-23 | 82 |
lateral plate mesoderm | 2.71e-21 | 203 |
skeletal element | 2.72e-21 | 90 |
skeletal system | 1.26e-18 | 100 |
connective tissue | 2.36e-15 | 371 |
musculoskeletal system | 4.44e-08 | 167 |
mesoderm | 2.58e-07 | 315 |
mesoderm-derived structure | 2.58e-07 | 315 |
presumptive mesoderm | 2.58e-07 | 315 |