FFCP PHASE1:Hg19::chr10:74767335..74767338,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:74767335..74767338,-
|short_description=p@chr10:74767335..74767338,-
|description=CAGE_peak_at_chr10:74767335..74767338,-
|association_with_transcript=NA
...") |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:74767335..74767338,- | |||
|description=CAGE_peak_at_chr10:74767335..74767338,- | |||
|id=chr10:74767335..74767338,- | |||
|ontology_enrichment_celltype=CL:0000055!5.39e-09!180;CL:0000048!2.75e-08!430;CL:0000359!3.26e-08!32;CL:0000723!1.09e-07!436;CL:0000034!1.60e-07!444;CL:0000680!4.02e-07!57;CL:0000056!4.02e-07!57;CL:0000355!4.02e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.11e-08;32!CL:0000134;4.12e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.19e-11,427;CL:0000723,3.10e-10,433;CL:0000034,5.63e-10,441;CL:0000359,4.64e-09,32;CL:0000057,2.44e-08,76;CL:0000680,2.53e-08,58;CL:0000056,2.53e-08,58;CL:0000355,2.53e-08,58;CL:0000192,4.62e-08,43;CL:0000514,4.62e-08,43;CL:0000187,1.13e-07,55;CL:0000393,4.09e-07,61;CL:0000211,4.09e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.85e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.80e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.11e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.14e-07!61;UBERON:0002036!1.14e-07!61;UBERON:0003082!1.14e-07!61;UBERON:0002385!5.69e-07!63;UBERON:0001015!5.69e-07!63;UBERON:0000383!5.69e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.79e-09,62;UBERON:0002036,1.79e-09,62;UBERON:0003082,1.79e-09,62;UBERON:0002385,7.67e-09,64;UBERON:0001015,7.67e-09,64;UBERON:0000383,7.67e-09,64;UBERON:0007524,1.94e-08,73;UBERON:0000486,2.72e-08,83;UBERON:0002329,3.59e-08,71;UBERON:0003059,3.59e-08,71;UBERON:0007282,3.59e-08,71;UBERON:0004290,3.59e-08,71;UBERON:0009618,3.59e-08,71;UBERON:0003077,6.56e-08,72;UBERON:0007285,6.56e-08,72;UBERON:0001637,1.27e-07,42;UBERON:0003509,1.27e-07,42;UBERON:0004572,1.27e-07,42 | |||
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| ||
|short_description=p@chr10:74767335..74767338,- | |||
}} | }} |
Latest revision as of 15:29, 23 July 2015
Short description: | p@chr10:74767335..74767338, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:74767335..74767338, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.19e-11 | 427 |
somatic stem cell | 3.10e-10 | 433 |
stem cell | 5.63e-10 | 441 |
vascular associated smooth muscle cell | 4.64e-09 | 32 |
fibroblast | 2.44e-08 | 76 |
muscle precursor cell | 2.53e-08 | 58 |
myoblast | 2.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.53e-08 | 58 |
smooth muscle cell | 4.62e-08 | 43 |
smooth muscle myoblast | 4.62e-08 | 43 |
muscle cell | 1.13e-07 | 55 |
electrically responsive cell | 4.09e-07 | 61 |
electrically active cell | 4.09e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.79e-09 | 62 |
striated muscle tissue | 1.79e-09 | 62 |
myotome | 1.79e-09 | 62 |
muscle tissue | 7.67e-09 | 64 |
musculature | 7.67e-09 | 64 |
musculature of body | 7.67e-09 | 64 |
dense mesenchyme tissue | 1.94e-08 | 73 |
multilaminar epithelium | 2.72e-08 | 83 |
somite | 3.59e-08 | 71 |
presomitic mesoderm | 3.59e-08 | 71 |
presumptive segmental plate | 3.59e-08 | 71 |
dermomyotome | 3.59e-08 | 71 |
trunk paraxial mesoderm | 3.59e-08 | 71 |
paraxial mesoderm | 6.56e-08 | 72 |
presumptive paraxial mesoderm | 6.56e-08 | 72 |
artery | 1.27e-07 | 42 |
arterial blood vessel | 1.27e-07 | 42 |
arterial system | 1.27e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.11e-11 | 14 |