FFCP PHASE1:Hg19::chr11:128172471..128172510,-: Difference between revisions
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|id=chr11:128172471..128172510,-
|short_description=p@chr11:128172471..128172510,-
|description=CAGE_peak_at_chr11:128172471..128172510,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:128172471..128172510,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr11:128172471..128172510,- | |||
|id=chr11:128172471..128172510,- | |||
|ontology_enrichment_celltype=CL:0000791!3.48e-36!18;CL:0000789!3.48e-36!18;CL:0002420!3.48e-36!18;CL:0002419!3.48e-36!18;CL:0000790!3.48e-36!18;CL:0000084!1.48e-27!25;CL:0000827!1.48e-27!25;CL:0000625!1.04e-24!11;CL:0000738!4.12e-23!140;CL:0000838!7.30e-22!52;CL:0000542!2.60e-21!53;CL:0000051!2.60e-21!53;CL:0000037!1.77e-16!172;CL:0000566!1.77e-16!172;CL:0002087!4.58e-16!119;CL:0000624!1.58e-15!6;CL:0000988!6.69e-15!182;CL:0002031!6.28e-13!124;CL:0002032!4.22e-12!165;CL:0000837!4.22e-12!165;CL:0000898!1.07e-08!3;CL:0000623!2.88e-08!3;CL:0000825!2.88e-08!3;CL:0000767!4.85e-08!3;CL:0000842!1.97e-07!3;CL:0000094!3.30e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.30e-59;18!CL:0000789;4.30e-59;18!CL:0002419;4.30e-59;18!CL:0000084;2.42e-41;25!CL:0000625;8.53e-40;11!CL:0000624;1.52e-24;6!CL:0000898;2.76e-13;3!CL:0000542;8.84e-13;53!CL:0000623;1.43e-12;3!CL:0000767;3.00e-12;3!CL:0000815;2.25e-09;2!CL:0000792;2.25e-09;2!CL:0002677;2.25e-09;2!CL:0000094;9.31e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.38e-59,18;CL:0000789,5.38e-59,18;CL:0002420,5.38e-59,18;CL:0002419,5.38e-59,18;CL:0000790,5.38e-59,18;CL:0000084,2.83e-41,25;CL:0000827,2.83e-41,25;CL:0000625,1.06e-39,11;CL:0000838,3.22e-25,52;CL:0000542,1.20e-24,53;CL:0000051,1.20e-24,53;CL:0000624,1.56e-24,6;CL:0000738,1.30e-16,136;CL:0002087,1.05e-14,115;CL:0000898,2.71e-13,3;CL:0000623,1.38e-12,3;CL:0000825,1.38e-12,3;CL:0000767,3.24e-12,3;CL:0000037,3.74e-12,168;CL:0002031,2.34e-11,120;CL:0000988,3.39e-11,177;CL:0002032,7.86e-11,161;CL:0000837,7.86e-11,161;CL:0000815,2.20e-09,2;CL:0000792,2.20e-09,2;CL:0002677,2.20e-09,2;CL:0000094,9.66e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;4.30e-59;18!CL:0000051;8.84e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.36e-13!15;UBERON:0000179!6.36e-13!15;UBERON:0000463!6.36e-13!15;UBERON:0004177!7.43e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.21e-08;2!UBERON:0005058;4.21e-08;2!UBERON:0009113;4.21e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.47e-09,4;UBERON:0005058,4.47e-09,4;UBERON:0009113,4.47e-09,4;UBERON:0003295,4.47e-09,4;UBERON:0005562,4.47e-09,4 | |||
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| ||
|short_description=p@chr11:128172471..128172510,- | |||
}} | }} |
Latest revision as of 19:51, 23 July 2015
Short description: | p@chr11:128172471..128172510, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128172471..128172510, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.38e-59 | 18 |
alpha-beta T cell | 5.38e-59 | 18 |
immature T cell | 5.38e-59 | 18 |
mature T cell | 5.38e-59 | 18 |
immature alpha-beta T cell | 5.38e-59 | 18 |
T cell | 2.83e-41 | 25 |
pro-T cell | 2.83e-41 | 25 |
CD8-positive, alpha-beta T cell | 1.06e-39 | 11 |
lymphoid lineage restricted progenitor cell | 3.22e-25 | 52 |
lymphocyte | 1.20e-24 | 53 |
common lymphoid progenitor | 1.20e-24 | 53 |
CD4-positive, alpha-beta T cell | 1.56e-24 | 6 |
leukocyte | 1.30e-16 | 136 |
nongranular leukocyte | 1.05e-14 | 115 |
naive T cell | 2.71e-13 | 3 |
natural killer cell | 1.38e-12 | 3 |
pro-NK cell | 1.38e-12 | 3 |
basophil | 3.24e-12 | 3 |
hematopoietic stem cell | 3.74e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 2.34e-11 | 120 |
hematopoietic cell | 3.39e-11 | 177 |
hematopoietic oligopotent progenitor cell | 7.86e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.86e-11 | 161 |
regulatory T cell | 2.20e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.20e-09 | 2 |
naive regulatory T cell | 2.20e-09 | 2 |
granulocyte | 9.66e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.47e-09 | 4 |
hemolymphoid system gland | 4.47e-09 | 4 |
thymic region | 4.47e-09 | 4 |
pharyngeal gland | 4.47e-09 | 4 |
thymus primordium | 4.47e-09 | 4 |