FFCP PHASE1:Hg19::chr11:128172471..128172510,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:128172471..128172510,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr11:128172471..128172510,- | |||
|id=chr11:128172471..128172510,- | |||
|ontology_enrichment_celltype=CL:0000791!3.48e-36!18;CL:0000789!3.48e-36!18;CL:0002420!3.48e-36!18;CL:0002419!3.48e-36!18;CL:0000790!3.48e-36!18;CL:0000084!1.48e-27!25;CL:0000827!1.48e-27!25;CL:0000625!1.04e-24!11;CL:0000738!4.12e-23!140;CL:0000838!7.30e-22!52;CL:0000542!2.60e-21!53;CL:0000051!2.60e-21!53;CL:0000037!1.77e-16!172;CL:0000566!1.77e-16!172;CL:0002087!4.58e-16!119;CL:0000624!1.58e-15!6;CL:0000988!6.69e-15!182;CL:0002031!6.28e-13!124;CL:0002032!4.22e-12!165;CL:0000837!4.22e-12!165;CL:0000898!1.07e-08!3;CL:0000623!2.88e-08!3;CL:0000825!2.88e-08!3;CL:0000767!4.85e-08!3;CL:0000842!1.97e-07!3;CL:0000094!3.30e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.30e-59;18!CL:0000789;4.30e-59;18!CL:0002419;4.30e-59;18!CL:0000084;2.42e-41;25!CL:0000625;8.53e-40;11!CL:0000624;1.52e-24;6!CL:0000898;2.76e-13;3!CL:0000542;8.84e-13;53!CL:0000623;1.43e-12;3!CL:0000767;3.00e-12;3!CL:0000815;2.25e-09;2!CL:0000792;2.25e-09;2!CL:0002677;2.25e-09;2!CL:0000094;9.31e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.38e-59,18;CL:0000789,5.38e-59,18;CL:0002420,5.38e-59,18;CL:0002419,5.38e-59,18;CL:0000790,5.38e-59,18;CL:0000084,2.83e-41,25;CL:0000827,2.83e-41,25;CL:0000625,1.06e-39,11;CL:0000838,3.22e-25,52;CL:0000542,1.20e-24,53;CL:0000051,1.20e-24,53;CL:0000624,1.56e-24,6;CL:0000738,1.30e-16,136;CL:0002087,1.05e-14,115;CL:0000898,2.71e-13,3;CL:0000623,1.38e-12,3;CL:0000825,1.38e-12,3;CL:0000767,3.24e-12,3;CL:0000037,3.74e-12,168;CL:0002031,2.34e-11,120;CL:0000988,3.39e-11,177;CL:0002032,7.86e-11,161;CL:0000837,7.86e-11,161;CL:0000815,2.20e-09,2;CL:0000792,2.20e-09,2;CL:0002677,2.20e-09,2;CL:0000094,9.66e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;4.30e-59;18!CL:0000051;8.84e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.36e-13!15;UBERON:0000179!6.36e-13!15;UBERON:0000463!6.36e-13!15;UBERON:0004177!7.43e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.21e-08;2!UBERON:0005058;4.21e-08;2!UBERON:0009113;4.21e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.47e-09,4;UBERON:0005058,4.47e-09,4;UBERON:0009113,4.47e-09,4;UBERON:0003295,4.47e-09,4;UBERON:0005562,4.47e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9146639045029,2.68680578668049,2.32224184974114,0,0,0,0,0.142169232487422,0,2.76997704265939,2.00544447470142,2.82114131930607,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,1.68152568894461,0,17.3104597700173,19.2575273747091,20.1489469019519,2.50779743086017,27.7033926638552,19.8848078408588,42.8618802497405,5.68193330114385,21.2116253381883,13.9566353587681,19.7686820548461,1.5370958367081,1.30059347559878,1.47994114143309,1.38175008892924,2.60822777161547,30.9918917008706,27.5567052932404,34.4967228556423,1.69964014046349,36.7891673857844,41.2352934579156,40.73617041514,1.27426165729639,1.30216690771284,2.85135613334512,7.22760571573309,3.32765189001488,3.74792179657038,1.18388626022008,4.92676798152628,9.27391018833769,7.75576567772171,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51686128565396,7.76259269494262,10.5241289749394,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,2.5885704098234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.714695326373367,1.23408681925858,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.563903507879121,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0334225573761,1.55186785739645,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:128172471..128172510,- | |||
}} |
Latest revision as of 19:51, 23 July 2015
Short description: | p@chr11:128172471..128172510, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128172471..128172510, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.38e-59 | 18 |
alpha-beta T cell | 5.38e-59 | 18 |
immature T cell | 5.38e-59 | 18 |
mature T cell | 5.38e-59 | 18 |
immature alpha-beta T cell | 5.38e-59 | 18 |
T cell | 2.83e-41 | 25 |
pro-T cell | 2.83e-41 | 25 |
CD8-positive, alpha-beta T cell | 1.06e-39 | 11 |
lymphoid lineage restricted progenitor cell | 3.22e-25 | 52 |
lymphocyte | 1.20e-24 | 53 |
common lymphoid progenitor | 1.20e-24 | 53 |
CD4-positive, alpha-beta T cell | 1.56e-24 | 6 |
leukocyte | 1.30e-16 | 136 |
nongranular leukocyte | 1.05e-14 | 115 |
naive T cell | 2.71e-13 | 3 |
natural killer cell | 1.38e-12 | 3 |
pro-NK cell | 1.38e-12 | 3 |
basophil | 3.24e-12 | 3 |
hematopoietic stem cell | 3.74e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 2.34e-11 | 120 |
hematopoietic cell | 3.39e-11 | 177 |
hematopoietic oligopotent progenitor cell | 7.86e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.86e-11 | 161 |
regulatory T cell | 2.20e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.20e-09 | 2 |
naive regulatory T cell | 2.20e-09 | 2 |
granulocyte | 9.66e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.47e-09 | 4 |
hemolymphoid system gland | 4.47e-09 | 4 |
thymic region | 4.47e-09 | 4 |
pharyngeal gland | 4.47e-09 | 4 |
thymus primordium | 4.47e-09 | 4 |