FFCP PHASE1:Hg19::chr11:129912180..129912194,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:129912180..129912194,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:129912180..129912194,+ | |||
|id=chr11:129912180..129912194,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.37e-84!42;CL:0000860!6.34e-78!45;CL:0000766!2.36e-59!76;CL:0002194!5.80e-54!63;CL:0000576!5.80e-54!63;CL:0000040!5.80e-54!63;CL:0000559!5.80e-54!63;CL:0002009!5.83e-52!65;CL:0000839!1.88e-47!70;CL:0000557!1.26e-46!71;CL:0000763!3.76e-36!112;CL:0000049!3.76e-36!112;CL:0000738!1.37e-35!140;CL:0002087!1.27e-32!119;CL:0000037!2.45e-26!172;CL:0000566!2.45e-26!172;CL:0002031!4.62e-26!124;CL:0000988!4.04e-24!182;CL:0002032!5.07e-24!165;CL:0000837!5.07e-24!165;CL:0000134!2.90e-13!358;CL:0002393!8.74e-13!9;CL:0002397!8.74e-13!9;CL:0002320!1.05e-12!365;CL:0000094!1.68e-11!8;CL:0000219!2.40e-11!390;CL:0000034!1.84e-10!444;CL:0000723!2.52e-10!436;CL:0000048!4.06e-10!430;CL:0000063!1.09e-09!578;CL:0000767!1.44e-08!3;CL:0000081!4.01e-08!11;CL:0000842!4.94e-08!3;CL:0002371!7.61e-08!591;CL:0000012!2.27e-07!682;CL:0000144!5.92e-07!625;CL:0000548!6.83e-07!679;CL:0000004!6.83e-07!679;CL:0000255!6.83e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-89;33!CL:0002057;1.46e-89;33!CL:0000473;1.51e-60;39!CL:0000234;1.51e-60;39!CL:0000576;2.54e-50;48!CL:0000766;1.82e-35;69!CL:0000094;7.70e-24;8!CL:0000763;3.35e-18;100!CL:0000081;3.35e-17;11!CL:0000767;1.04e-16;3!CL:0002087;5.70e-16;104!CL:0000771;4.19e-12;2!CL:0000738;8.52e-11;136!CL:0002393;2.29e-09;6!CL:0002397;2.29e-09;6!CL:0000226;5.44e-08;3!CL:0000842;5.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.67e-97,42;CL:0002057,9.67e-97,42;CL:0000473,6.06e-84,48;CL:0000234,6.06e-84,48;CL:0000766,1.60e-80,72;CL:0002194,5.08e-66,59;CL:0000576,5.08e-66,59;CL:0000040,5.08e-66,59;CL:0000559,5.08e-66,59;CL:0002009,1.05e-63,61;CL:0000839,1.58e-58,66;CL:0000557,1.39e-57,67;CL:0000763,6.99e-52,108;CL:0000049,6.99e-52,108;CL:0000738,2.00e-45,136;CL:0002087,1.57e-36,115;CL:0000037,1.29e-35,168;CL:0000988,1.72e-33,177;CL:0002032,7.60e-33,161;CL:0000837,7.60e-33,161;CL:0002031,7.84e-30,120;CL:0000094,6.05e-24,8;CL:0000081,2.82e-17,11;CL:0000767,9.84e-17,3;CL:0000134,1.63e-13,354;CL:0002320,4.01e-13,361;CL:0000771,3.75e-12,2;CL:0000219,9.61e-12,386;CL:0000048,4.71e-10,427;CL:0000723,8.07e-10,433;CL:0000034,1.62e-09,441;CL:0000226,5.44e-08,3;CL:0000842,5.44e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.84e-72;42!CL:0000049;1.23e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.09e-40!80;UBERON:0001474!1.58e-36!86;UBERON:0002390!1.78e-34!102;UBERON:0003061!1.78e-34!102;UBERON:0002193!5.64e-32!112;UBERON:0004765!4.59e-31!101;UBERON:0001434!4.59e-31!101;UBERON:0002405!2.29e-27!115;UBERON:0003081!1.72e-21!216;UBERON:0002204!3.03e-16!167;UBERON:0002384!6.05e-12!375;UBERON:0000926!9.66e-09!448;UBERON:0004120!9.66e-09!448;UBERON:0006603!9.66e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-50,76;UBERON:0001474,3.87e-46,82;UBERON:0002390,7.82e-44,98;UBERON:0003061,7.82e-44,98;UBERON:0004765,1.41e-41,90;UBERON:0002405,4.58e-40,93;UBERON:0002193,2.91e-39,108;UBERON:0001434,6.89e-37,100;UBERON:0002204,7.45e-20,167;UBERON:0003081,1.22e-19,203;UBERON:0002384,1.37e-12,371;UBERON:0000926,1.87e-10,315;UBERON:0004120,1.87e-10,315;UBERON:0006603,1.87e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.53531759238885,6.34746105595912,0,0,0,0,0,0,15.5118714388926,13.8375668754398,12.3696196308036,0,0,0,1.74477886535478,0.755751887377619,0.727752183563449,4.88100977501938,4.11167888021826,3.71647645074124,2.01384674625505,2.30544635876191,2.36482229888585,13.4450815487281,7.10033151942209,9.47985406160392,3.57660445130949,0.272906150057846,1.57306439111559,8.26426509401437,4.17207735198922,7.67204550958849,0,1.19678194572979,0.852449501065388,7.54544020434318,5.10646702222026,3.11411124497787,6.78371396193207,2.60741459210101,4.34377689410233,1.21079900526674,5.89244217580104,2.21523671208619,0.211255286311942,0.212604299965044,0.419317291016752,0.561643155732475,0.600707571366025,0.64290234678832,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0,0,0,0,0,0.337834441449967,1.53316637465883,0,0,6.58902087180316,3.87780264148325,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,3.01999881146064,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:129912180..129912194,+ | |||
}} |
Latest revision as of 19:57, 23 July 2015
Short description: | p@chr11:129912180..129912194, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129912180..129912194, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.50e-50 | 76 |
bone element | 3.87e-46 | 82 |
hematopoietic system | 7.82e-44 | 98 |
blood island | 7.82e-44 | 98 |
skeletal element | 1.41e-41 | 90 |
immune system | 4.58e-40 | 93 |
hemolymphoid system | 2.91e-39 | 108 |
skeletal system | 6.89e-37 | 100 |
musculoskeletal system | 7.45e-20 | 167 |
lateral plate mesoderm | 1.22e-19 | 203 |
connective tissue | 1.37e-12 | 371 |
mesoderm | 1.87e-10 | 315 |
mesoderm-derived structure | 1.87e-10 | 315 |
presumptive mesoderm | 1.87e-10 | 315 |