FFCP PHASE1:Hg19::chr11:130014487..130014533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:130014487..130014533,+ | |||
|coexpression_cluster_id=C3116 | |coexpression_cluster_id=C3116 | ||
|description=CAGE_peak_at_chr11:130014487..130014533,+ | |description=CAGE_peak_at_chr11:130014487..130014533,+ | ||
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|ontology_enrichment_celltype=CL:0002194!1.15e-07!63;CL:0000576!1.15e-07!63;CL:0000040!1.15e-07!63;CL:0000559!1.15e-07!63;CL:0002057!2.33e-07!42;CL:0002009!8.57e-07!65 | |ontology_enrichment_celltype=CL:0002194!1.15e-07!63;CL:0000576!1.15e-07!63;CL:0000040!1.15e-07!63;CL:0000559!1.15e-07!63;CL:0002057!2.33e-07!42;CL:0002009!8.57e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.29e-10;39!CL:0000234;4.29e-10;39!CL:0000860;1.91e-09;33!CL:0002057;1.91e-09;33 | |ontology_enrichment_celltype_v019=CL:0000473;4.29e-10;39!CL:0000234;4.29e-10;39!CL:0000860;1.91e-09;33!CL:0002057;1.91e-09;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.98e-09,48;CL:0000234,2.98e-09,48;CL:0002194,3.06e-08,59;CL:0000576,3.06e-08,59;CL:0000040,3.06e-08,59;CL:0000559,3.06e-08,59;CL:0000860,2.79e-07,42;CL:0002057,2.79e-07,42;CL:0002009,3.05e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.17e-11!659;UBERON:0000922!1.70e-11!612;UBERON:0002050!2.30e-10!605;UBERON:0005423!2.30e-10!605;UBERON:0000467!2.82e-10!625;UBERON:0000480!2.96e-10!626;UBERON:0000923!4.81e-10!604;UBERON:0005291!4.81e-10!604;UBERON:0006598!4.81e-10!604;UBERON:0002532!4.81e-10!604;UBERON:0000062!1.30e-09!511;UBERON:0000025!6.24e-08!194;UBERON:0001049!3.99e-07!57;UBERON:0005068!3.99e-07!57;UBERON:0006241!3.99e-07!57;UBERON:0007135!3.99e-07!57;UBERON:0000477!4.07e-07!286 | |ontology_enrichment_uberon=UBERON:0000468!1.17e-11!659;UBERON:0000922!1.70e-11!612;UBERON:0002050!2.30e-10!605;UBERON:0005423!2.30e-10!605;UBERON:0000467!2.82e-10!625;UBERON:0000480!2.96e-10!626;UBERON:0000923!4.81e-10!604;UBERON:0005291!4.81e-10!604;UBERON:0006598!4.81e-10!604;UBERON:0002532!4.81e-10!604;UBERON:0000062!1.30e-09!511;UBERON:0000025!6.24e-08!194;UBERON:0001049!3.99e-07!57;UBERON:0005068!3.99e-07!57;UBERON:0006241!3.99e-07!57;UBERON:0007135!3.99e-07!57;UBERON:0000477!4.07e-07!286 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,7.74e-10,592;UBERON:0000923,1.87e-09,560;UBERON:0010316,1.87e-09,560;UBERON:0005291,1.87e-09,560;UBERON:0006598,1.87e-09,560;UBERON:0010317,1.87e-09,560;UBERON:0002532,1.87e-09,560;UBERON:0002050,4.62e-09,564;UBERON:0005423,7.56e-09,581;UBERON:0000025,2.11e-07,192;UBERON:0001049,5.66e-07,56;UBERON:0005068,5.66e-07,56;UBERON:0006241,5.66e-07,56;UBERON:0007135,5.66e-07,56 | |||
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| ||
|short_description=p@chr11:130014487..130014533,+ | |short_description=p@chr11:130014487..130014533,+ | ||
}} | }} |
Latest revision as of 19:59, 23 July 2015
Short description: | p@chr11:130014487..130014533, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:130014487..130014533, + |
Coexpression cluster: | C3116_pineal_Monocytederived_thyroid_colon_Cardiac_large_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.98e-09 | 48 |
phagocyte | 2.98e-09 | 48 |
monopoietic cell | 3.06e-08 | 59 |
monocyte | 3.06e-08 | 59 |
monoblast | 3.06e-08 | 59 |
promonocyte | 3.06e-08 | 59 |
classical monocyte | 2.79e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.79e-07 | 42 |
macrophage dendritic cell progenitor | 3.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
embryo | 7.74e-10 | 592 |
germ layer | 1.87e-09 | 560 |
germ layer / neural crest | 1.87e-09 | 560 |
embryonic tissue | 1.87e-09 | 560 |
presumptive structure | 1.87e-09 | 560 |
germ layer / neural crest derived structure | 1.87e-09 | 560 |
epiblast (generic) | 1.87e-09 | 560 |
embryonic structure | 4.62e-09 | 564 |
developing anatomical structure | 7.56e-09 | 581 |
tube | 2.11e-07 | 192 |
neural tube | 5.66e-07 | 56 |
neural rod | 5.66e-07 | 56 |
future spinal cord | 5.66e-07 | 56 |
neural keel | 5.66e-07 | 56 |