FFCP PHASE1:Hg19::chr11:130786333..130786399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=399979 | |EntrezGene=entrezgene:399979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=21532 | |HGNC=HGNC:21532 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E9PLV3,E9PKB9,F5H5D1,Q92543 | |UniProt=uniprot:E9PLV3,uniprot:E9PKB9,uniprot:F5H5D1,uniprot:Q92543 | ||
|association_with_transcript=0bp_to_ENST00000528555,ENST00000530356,ENST00000531608,ENST00000533214,ENST00000533318,ENST00000539184,NM_014758,uc001qgk.3,uc001qgl.3,uc009zcx.1,uc010sce.1,uc010scf.1,uc010scg.1_5end | |association_with_transcript=0bp_to_ENST00000528555,ENST00000530356,ENST00000531608,ENST00000533214,ENST00000533318,ENST00000539184,NM_014758,uc001qgk.3,uc001qgl.3,uc009zcx.1,uc010sce.1,uc010scf.1,uc010scg.1_5end | ||
|cluster_id=chr11:130786333..130786399,- | |||
|description=CAGE_peak_1_at_SNX19_5end | |description=CAGE_peak_1_at_SNX19_5end | ||
|id=chr11:130786333..130786399,- | |id=chr11:130786333..130786399,- |
Revision as of 20:02, 23 July 2015
Short description: | p1@SNX19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNX19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528555, ENST00000530356, ENST00000531608, ENST00000533214, ENST00000533318, ENST00000539184, NM_014758, uc001qgk.3, uc001qgl.3, uc009zcx.1, uc010sce.1, uc010scf.1, uc010scg.1_5end |
EntrezGene: | 399979 |
HGNC: | 21532 |
UniProt: | E9PLV3E9PKB9F5H5D1Q92543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SNX19 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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adult organism | 1.35e-23 | 114 |
neural tube | 1.28e-12 | 56 |
neural rod | 1.28e-12 | 56 |
future spinal cord | 1.28e-12 | 56 |
neural keel | 1.28e-12 | 56 |
regional part of nervous system | 5.13e-12 | 53 |
regional part of brain | 5.13e-12 | 53 |
neural plate | 3.75e-11 | 82 |
presumptive neural plate | 3.75e-11 | 82 |
regional part of forebrain | 1.53e-10 | 41 |
Showing 1 to 10 of 29 entries