FFCP PHASE1:Hg19::chr11:1813750..1813759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000445859_5end | |association_with_transcript=-23bp_to_ENST00000445859_5end | ||
|cluster_id=chr11:1813750..1813759,+ | |||
|description=CAGE_peak_1_at_ENST00000445859_5end | |description=CAGE_peak_1_at_ENST00000445859_5end | ||
|id=chr11:1813750..1813759,+ | |id=chr11:1813750..1813759,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;7.14e-34;3!CL:0000622;1.29e-20;5!CL:0002322;1.68e-20;5!CL:0000154;2.73e-17;6!CL:0000946;3.26e-12;1!CL:0000786;3.26e-12;1!CL:0000150;9.96e-12;9!CL:0000148;1.84e-10;10!CL:0000082;1.10e-09;19!CL:0000147;1.28e-07;14!CL:0002321;3.32e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.40e-34,3;CL:0000622,1.09e-20,5;CL:0002322,1.99e-20,5;CL:0000154,2.38e-17,6;CL:0000946,2.20e-12,1;CL:0000786,2.20e-12,1;CL:0000980,2.20e-12,1;CL:0000150,9.09e-12,9;CL:0000148,2.17e-10,10;CL:0000541,2.17e-10,10;CL:0000082,1.09e-09,19;CL:0000147,1.43e-07,14;CL:0000785,8.06e-07,2;CL:0000955,8.06e-07,2;CL:0000818,8.06e-07,2;CL:0000954,8.06e-07,2;CL:0000816,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.81e-07;2 | |||
|ontology_enrichment_disease=DOID:162!6.67e-07!235 | |ontology_enrichment_disease=DOID:162!6.67e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:5409;3.09e-12;4!DOID:3905;6.29e-12;9!DOID:1325;2.29e-07;7!DOID:3904;2.29e-07;7!DOID:1324;2.33e-07;15!DOID:0050615;6.28e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.76e-12,4;DOID:3905,5.84e-12,9;DOID:1325,2.15e-07,7;DOID:3904,2.15e-07,7;DOID:1324,2.23e-07,15;DOID:0050615,6.03e-07,16 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.73e-17;6!UBERON:0003293;2.73e-17;6!UBERON:0003294;2.73e-17;6!UBERON:0010047;2.73e-17;6!UBERON:0003408;2.73e-17;6!UBERON:0000167;2.73e-17;6!UBERON:0004802;1.10e-09;19!UBERON:0000115;1.10e-09;19!UBERON:0002048;2.17e-08;22!UBERON:0004807;2.17e-08;22!UBERON:0000117;2.17e-08;22!UBERON:0000171;2.17e-08;22!UBERON:0000170;2.17e-08;22!UBERON:0001041;1.00e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.38e-17,6;UBERON:0003293,2.38e-17,6;UBERON:0003294,2.38e-17,6;UBERON:0010047,2.38e-17,6;UBERON:0000167,2.38e-17,6;UBERON:0003408,1.20e-10,10;UBERON:0004802,1.09e-09,19;UBERON:0000115,1.09e-09,19;UBERON:0002048,2.15e-08,22;UBERON:0000117,2.15e-08,22;UBERON:0000171,2.15e-08,22;UBERON:0000170,2.15e-08,22;UBERON:0005597,2.15e-08,22;UBERON:0000118,2.15e-08,22;UBERON:0001004,9.37e-07,74 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,1.10926203050036,0,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,2.70852973188684,0,0,0.224723484445085,0,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0,0,0,0,0.99458338599545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0.334372990781356,0,0,0,0.222820913770347,0.589211814949674,0.664601683750863,0.270803863765016,0,0,0,0.276350017785848,0.289803085735052,0.593146252648242,0.802622484269139,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.194874010322397,0,0,0.323292113637624,0,0,0,0.193260853163297,0,0,2.43947412259191,0.795178609928912,1.16193942869518,2.28054321033815,0.252320850875628,0,0,0,0,0.464367928031979,0,0.591534000199219,0.337169380156203,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,1.02827492703324,0.300343057843917,0,0.224262168690721,0,0,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0,1.08524321078289,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0.399158742865633,0,0.423347165447766,0.324621940274555,0.561594356226918,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0.614481528616916,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0,0,0.359030577639089,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.261177619741208,0.34945333648406,0,0,0.365446585430928,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0.288109595976299,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0.169346664131569,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0.211200673038813,4.48218348332112,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18201860353331,0.124980407962107,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,1.95897778844825,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.47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| 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| ||
|short_description=p1@ENST00000445859 | |short_description=p1@ENST00000445859 | ||
}} | }} |
Latest revision as of 20:35, 23 July 2015
Short description: | p1@ENST00000445859 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000445859_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000445859_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.40e-34 | 3 |
acinar cell | 1.09e-20 | 5 |
embryonic stem cell | 1.99e-20 | 5 |
protein secreting cell | 2.38e-17 | 6 |
antibody secreting cell | 2.20e-12 | 1 |
plasma cell | 2.20e-12 | 1 |
plasmablast | 2.20e-12 | 1 |
glandular epithelial cell | 9.09e-12 | 9 |
melanocyte | 2.17e-10 | 10 |
melanoblast | 2.17e-10 | 10 |
epithelial cell of lung | 1.09e-09 | 19 |
pigment cell | 1.43e-07 | 14 |
mature B cell | 8.06e-07 | 2 |
pre-B-II cell | 8.06e-07 | 2 |
transitional stage B cell | 8.06e-07 | 2 |
small pre-B-II cell | 8.06e-07 | 2 |
immature B cell | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.38e-17 | 6 |
gland of oral region | 2.38e-17 | 6 |
gland of foregut | 2.38e-17 | 6 |
oral gland | 2.38e-17 | 6 |
oral cavity | 2.38e-17 | 6 |
gland of gut | 1.20e-10 | 10 |
respiratory tract epithelium | 1.09e-09 | 19 |
lung epithelium | 1.09e-09 | 19 |
lung | 2.15e-08 | 22 |
respiratory tube | 2.15e-08 | 22 |
respiration organ | 2.15e-08 | 22 |
pair of lungs | 2.15e-08 | 22 |
lung primordium | 2.15e-08 | 22 |
lung bud | 2.15e-08 | 22 |
respiratory system | 9.37e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.76e-12 | 4 |
lung carcinoma | 5.84e-12 | 9 |
bronchus cancer | 2.15e-07 | 7 |
bronchogenic carcinoma | 2.15e-07 | 7 |
lung cancer | 2.23e-07 | 15 |
respiratory system cancer | 6.03e-07 | 16 |