FFCP PHASE1:Hg19::chr11:2016512..2016519,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=224bp_to_BC106079_5end | |association_with_transcript=224bp_to_BC106079_5end | ||
|cluster_id=chr11:2016512..2016519,- | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_10_at_BC106079_5end | |description=CAGE_peak_10_at_BC106079_5end | ||
|id=chr11:2016512..2016519,- | |id=chr11:2016512..2016519,- | ||
|ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.61e-22;19!CL:0002537;5.02e-13;5!CL:0002541;2.36e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.19e-22,19;CL:0002537,4.54e-13,5;CL:0002541,2.31e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.27e-08;1!UBERON:0010226;7.85e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.71e-08;1!DOID:10165;2.71e-08;1!DOID:1798;2.71e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.71e-08,1;DOID:10165,2.71e-08,1;DOID:1798,2.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.87e-19!9;UBERON:0005631!2.77e-15!14;UBERON:0000158!2.77e-15!14;UBERON:0001557!9.51e-15!19;UBERON:0000478!7.93e-12!24;UBERON:0000077!2.16e-10!130;UBERON:0003104!4.94e-09!238;UBERON:0009142!4.94e-09!238;UBERON:0000305!1.06e-08!7;UBERON:0001041!1.63e-08!98;UBERON:0004119!1.97e-08!169;UBERON:0000925!1.97e-08!169;UBERON:0006595!1.97e-08!169;UBERON:0003124!3.29e-08!7;UBERON:0004921!4.49e-08!129;UBERON:0004185!4.49e-08!129;UBERON:0001007!7.15e-08!155;UBERON:0001555!7.15e-08!155;UBERON:0007026!7.15e-08!155;UBERON:0001723!1.37e-07!3;UBERON:0001033!1.37e-07!3;UBERON:0010056!1.37e-07!3;UBERON:0004871!1.52e-07!8;UBERON:0000072!1.79e-07!46;UBERON:0008947!4.73e-07!38;UBERON:0003258!4.73e-07!38;UBERON:0000065!5.92e-07!53 | |ontology_enrichment_uberon=UBERON:0001737!2.87e-19!9;UBERON:0005631!2.77e-15!14;UBERON:0000158!2.77e-15!14;UBERON:0001557!9.51e-15!19;UBERON:0000478!7.93e-12!24;UBERON:0000077!2.16e-10!130;UBERON:0003104!4.94e-09!238;UBERON:0009142!4.94e-09!238;UBERON:0000305!1.06e-08!7;UBERON:0001041!1.63e-08!98;UBERON:0004119!1.97e-08!169;UBERON:0000925!1.97e-08!169;UBERON:0006595!1.97e-08!169;UBERON:0003124!3.29e-08!7;UBERON:0004921!4.49e-08!129;UBERON:0004185!4.49e-08!129;UBERON:0001007!7.15e-08!155;UBERON:0001555!7.15e-08!155;UBERON:0007026!7.15e-08!155;UBERON:0001723!1.37e-07!3;UBERON:0001033!1.37e-07!3;UBERON:0010056!1.37e-07!3;UBERON:0004871!1.52e-07!8;UBERON:0000072!1.79e-07!46;UBERON:0008947!4.73e-07!38;UBERON:0003258!4.73e-07!38;UBERON:0000065!5.92e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.00e-24;10!UBERON:0000158;3.00e-24;10!UBERON:0000478;9.28e-22;24!UBERON:0000305;9.10e-16;7!UBERON:0005090;1.32e-14;2!UBERON:0001630;1.32e-14;2!UBERON:0003124;2.36e-10;3!UBERON:0000920;2.36e-10;3!UBERON:0002426;1.77e-08;1!UBERON:0003831;1.77e-08;1!UBERON:0003898;1.77e-08;1!UBERON:0004830;1.77e-08;1!UBERON:0003830;1.77e-08;1!UBERON:0005175;1.77e-08;1!UBERON:0001774;1.77e-08;1!UBERON:0001103;1.77e-08;1!UBERON:0007029;7.85e-08;1!UBERON:0002084;7.85e-08;1!UBERON:0001389;7.85e-08;1!UBERON:0000026;7.85e-08;1!UBERON:0008784;7.85e-08;1!UBERON:0006058;7.85e-08;1!UBERON:0003663;7.85e-08;1!UBERON:0004256;7.85e-08;1!UBERON:0002082;7.85e-08;1!UBERON:0004708;7.85e-08;1!UBERON:0002101;7.85e-08;1!UBERON:0004709;7.85e-08;1!UBERON:0002529;7.85e-08;1!UBERON:0010538;7.85e-08;1!UBERON:0003661;7.85e-08;1!UBERON:0010890;7.85e-08;1!UBERON:0002471;7.85e-08;1!UBERON:0001383;7.85e-08;1!UBERON:0010758;7.85e-08;1!UBERON:0010707;7.85e-08;1!UBERON:0000978;7.85e-08;1!UBERON:0002103;7.85e-08;1!UBERON:0001665;7.85e-08;1!UBERON:0003823;7.85e-08;1!UBERON:0000154;7.85e-08;1!UBERON:0010709;7.85e-08;1!UBERON:0001052;2.00e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.12e-23,14;UBERON:0000158,4.12e-23,14;UBERON:0000478,1.03e-21,24;UBERON:0000305,9.83e-16,7;UBERON:0005090,1.37e-14,2;UBERON:0001630,1.37e-14,2;UBERON:0004871,8.64e-14,8;UBERON:0000920,2.31e-10,3;UBERON:0003124,1.79e-09,7;UBERON:0002426,1.77e-08,1;UBERON:0003831,1.77e-08,1;UBERON:0003898,1.77e-08,1;UBERON:0004830,1.77e-08,1;UBERON:0003830,1.77e-08,1;UBERON:0005175,1.77e-08,1;UBERON:0001774,1.77e-08,1;UBERON:0001103,1.77e-08,1;UBERON:0010084,1.77e-08,1;UBERON:0007029,5.79e-08,1;UBERON:0002084,7.59e-08,1;UBERON:0002082,7.59e-08,1;UBERON:0010226,7.59e-08,1;UBERON:0005418,8.12e-08,1;UBERON:0001389,8.12e-08,1;UBERON:0000026,8.12e-08,1;UBERON:0008784,8.12e-08,1;UBERON:0006058,8.12e-08,1;UBERON:0003663,8.12e-08,1;UBERON:0004256,8.12e-08,1;UBERON:0004708,8.12e-08,1;UBERON:0002101,8.12e-08,1;UBERON:0004709,8.12e-08,1;UBERON:0002529,8.12e-08,1;UBERON:0010538,8.12e-08,1;UBERON:0003661,8.12e-08,1;UBERON:0010890,8.12e-08,1;UBERON:0002471,8.12e-08,1;UBERON:0001383,8.12e-08,1;UBERON:0004357,8.12e-08,1;UBERON:0004347,8.12e-08,1;UBERON:0005420,8.12e-08,1;UBERON:0005732,8.12e-08,1;UBERON:0010758,8.12e-08,1;UBERON:0010707,8.12e-08,1;UBERON:0000978,8.12e-08,1;UBERON:0002103,8.12e-08,1;UBERON:0001665,8.12e-08,1;UBERON:0003823,8.12e-08,1;UBERON:0000154,8.12e-08,1;UBERON:0010709,8.12e-08,1;UBERON:0005733,8.12e-08,1;UBERON:0005730,8.12e-08,1;UBERON:0001052,1.49e-07,4 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,0,0,0,0,0,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,1.20505514941741,0.772057809126758,0.217879444092406,0.949082476444386,0.808987848960987,0.784885860501384,2.69323009862473,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7983512377401,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,2.12189300012382,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.275673144969061,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6534576910976,1.48482340416319,18.4296421259539,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.54323685961004,4.78501739597879,0,5.33034776018635,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4463976513782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0.0882561266915003,0.451961481561065,0,0,0,0.195551382734803,0,0,2.59752492456769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,1.32418394073086,0.25426853765475,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0,0,0.0752103283492573,0,0,3.66669372273991,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0.078493092850514,0,1.96190514319652,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,1.29485767437579,0.102662806856247,3.4794432940146,1.94284397223656,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0,0,0,1.0105859447911,0.435433495793923,2.73786640868225,0,0,1.99596213927608,0.0814032686109745,0,0,0,4.69281884806909,0,0.406896178315738,0,0,0 | |phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,0,0,0,0,0,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,1.20505514941741,0.772057809126758,0.217879444092406,0.949082476444386,0.808987848960987,0.784885860501384,2.69323009862473,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7983512377401,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,2.12189300012382,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.275673144969061,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6534576910976,1.48482340416319,18.4296421259539,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.54323685961004,4.78501739597879,0,5.33034776018635,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4463976513782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0.0882561266915003,0.451961481561065,0,0,0,0.195551382734803,0,0,2.59752492456769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,1.32418394073086,0.25426853765475,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0,0,0.0752103283492573,0,0,3.66669372273991,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0.078493092850514,0,1.96190514319652,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,1.29485767437579,0.102662806856247,3.4794432940146,1.94284397223656,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0,0,0,1.0105859447911,0.435433495793923,2.73786640868225,0,0,1.99596213927608,0.0814032686109745,0,0,0,4.69281884806909,0,0.406896178315738,0,0,0 | ||
|short_description=p10@BC106079 | |short_description=p10@BC106079 | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p10@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BC106079_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 224bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.19e-22 | 19 |
amnion mesenchymal stem cell | 4.54e-13 | 5 |
chorionic membrane mesenchymal stem cell | 2.31e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.71e-08 | 1 |
endocrine pancreas cancer | 2.71e-08 | 1 |
pancreatic endocrine carcinoma | 2.71e-08 | 1 |