FFCP PHASE1:Hg19::chr11:288119..288141,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000525217_5end | |association_with_transcript=33bp_to_ENST00000525217_5end | ||
|cluster_id=chr11:288119..288141,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ENST00000525217_5end | |description=CAGE_peak_1_at_ENST00000525217_5end | ||
|id=chr11:288119..288141,+ | |id=chr11:288119..288141,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.04e-19!18;CL:0000789!6.04e-19!18;CL:0002420!6.04e-19!18;CL:0002419!6.04e-19!18;CL:0000790!6.04e-19!18;CL:0000084!5.30e-15!25;CL:0000827!5.30e-15!25;CL:0000738!4.02e-14!140;CL:0000625!6.47e-13!11;CL:0000037!1.18e-10!172;CL:0000566!1.18e-10!172;CL:0000094!5.36e-10!8;CL:0000988!4.23e-09!182;CL:0002032!6.49e-09!165;CL:0000837!6.49e-09!165;CL:0002087!6.94e-09!119;CL:0000542!2.10e-07!53;CL:0000051!2.10e-07!53;CL:0000624!2.35e-07!6;CL:0002031!2.79e-07!124;CL:0000838!5.55e-07!52 | |ontology_enrichment_celltype=CL:0000791!6.04e-19!18;CL:0000789!6.04e-19!18;CL:0002420!6.04e-19!18;CL:0002419!6.04e-19!18;CL:0000790!6.04e-19!18;CL:0000084!5.30e-15!25;CL:0000827!5.30e-15!25;CL:0000738!4.02e-14!140;CL:0000625!6.47e-13!11;CL:0000037!1.18e-10!172;CL:0000566!1.18e-10!172;CL:0000094!5.36e-10!8;CL:0000988!4.23e-09!182;CL:0002032!6.49e-09!165;CL:0000837!6.49e-09!165;CL:0002087!6.94e-09!119;CL:0000542!2.10e-07!53;CL:0000051!2.10e-07!53;CL:0000624!2.35e-07!6;CL:0002031!2.79e-07!124;CL:0000838!5.55e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.12e-25;18!CL:0000789;1.12e-25;18!CL:0002419;1.12e-25;18!CL:0000084;2.49e-22;25!CL:0000625;5.12e-20;11!CL:0000094;1.06e-14;8!CL:0000081;2.41e-10;11!CL:0000624;3.86e-09;6!CL:0000775;8.98e-09;3!CL:0000542;4.19e-08;53!CL:0000226;2.29e-07;3!CL:0000623;2.29e-07;3!CL:0000842;2.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.43e-26,18;CL:0000789,5.43e-26,18;CL:0002420,5.43e-26,18;CL:0002419,5.43e-26,18;CL:0000790,5.43e-26,18;CL:0000084,2.18e-22,25;CL:0000827,2.18e-22,25;CL:0000625,4.52e-20,11;CL:0000094,1.44e-14,8;CL:0000838,8.59e-14,52;CL:0000542,1.99e-13,53;CL:0000051,1.99e-13,53;CL:0000738,9.53e-12,136;CL:0000081,3.00e-10,11;CL:0000624,2.12e-09,6;CL:0000775,8.78e-09,3;CL:0000037,7.15e-08,168;CL:0000623,1.81e-07,3;CL:0000825,1.81e-07,3;CL:0000226,2.65e-07,3;CL:0000842,2.65e-07,3;CL:0000988,4.64e-07,177;CL:0002087,5.51e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-25;18!CL:0000051;4.19e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.37e-11!15;UBERON:0000179!2.37e-11!15;UBERON:0000463!2.37e-11!15;UBERON:0007023!1.14e-10!115;UBERON:0002390!2.26e-08!102;UBERON:0003061!2.26e-08!102;UBERON:0002193!9.19e-08!112;UBERON:0004177!1.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.88e-22;15!UBERON:0000179;5.88e-22;15!UBERON:0000463;5.88e-22;15!UBERON:0002390;2.65e-14;32!UBERON:0002193;9.45e-10;42!UBERON:0006947;1.07e-07;3!UBERON:0004054;1.07e-07;3!UBERON:0002108;1.68e-07;4!UBERON:0004177;2.51e-07;5!UBERON:0005057;2.51e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.58e-22,15;UBERON:0000179,6.58e-22,15;UBERON:0000463,6.58e-22,15;UBERON:0006947,9.75e-08,3;UBERON:0004054,9.75e-08,3;UBERON:0004177,1.11e-07,7;UBERON:0005057,1.11e-07,7;UBERON:0002108,1.45e-07,4 | |||
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| ||
|short_description=p1@ENST00000525217 | |short_description=p1@ENST00000525217 | ||
}} | }} |
Latest revision as of 21:21, 23 July 2015
Short description: | p1@ENST00000525217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000525217_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 33bp_to_ENST00000525217_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.43e-26 | 18 |
alpha-beta T cell | 5.43e-26 | 18 |
immature T cell | 5.43e-26 | 18 |
mature T cell | 5.43e-26 | 18 |
immature alpha-beta T cell | 5.43e-26 | 18 |
T cell | 2.18e-22 | 25 |
pro-T cell | 2.18e-22 | 25 |
CD8-positive, alpha-beta T cell | 4.52e-20 | 11 |
granulocyte | 1.44e-14 | 8 |
lymphoid lineage restricted progenitor cell | 8.59e-14 | 52 |
lymphocyte | 1.99e-13 | 53 |
common lymphoid progenitor | 1.99e-13 | 53 |
leukocyte | 9.53e-12 | 136 |
blood cell | 3.00e-10 | 11 |
CD4-positive, alpha-beta T cell | 2.12e-09 | 6 |
neutrophil | 8.78e-09 | 3 |
hematopoietic stem cell | 7.15e-08 | 168 |
natural killer cell | 1.81e-07 | 3 |
pro-NK cell | 1.81e-07 | 3 |
single nucleate cell | 2.65e-07 | 3 |
mononuclear cell | 2.65e-07 | 3 |
hematopoietic cell | 4.64e-07 | 177 |
nongranular leukocyte | 5.51e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 6.58e-22 | 15 |
haemolymphatic fluid | 6.58e-22 | 15 |
organism substance | 6.58e-22 | 15 |
male genital duct | 9.75e-08 | 3 |
internal male genitalia | 9.75e-08 | 3 |
hemopoietic organ | 1.11e-07 | 7 |
immune organ | 1.11e-07 | 7 |
small intestine | 1.45e-07 | 4 |