FFCP PHASE1:Hg19::chr11:2954660..2954687,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2954660..2954687,- to FFCP PHASE1:Hg19::chr11:2954660..2954687,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:2954660..2954687,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:2954660..2954687,- | |||
|id=chr11:2954660..2954687,- | |||
|ontology_enrichment_celltype=CL:0002057!3.80e-52!42;CL:0000860!2.03e-49!45;CL:0000766!2.40e-40!76;CL:0000738!4.44e-37!140;CL:0000557!3.96e-34!71;CL:0002009!4.96e-33!65;CL:0000839!1.57e-31!70;CL:0002194!3.98e-31!63;CL:0000576!3.98e-31!63;CL:0000040!3.98e-31!63;CL:0000559!3.98e-31!63;CL:0002031!8.50e-27!124;CL:0002087!2.70e-26!119;CL:0000037!2.99e-26!172;CL:0000566!2.99e-26!172;CL:0000763!2.29e-25!112;CL:0000049!2.29e-25!112;CL:0000988!2.12e-23!182;CL:0002032!3.29e-23!165;CL:0000837!3.29e-23!165;CL:0002393!4.82e-12!9;CL:0002397!4.82e-12!9;CL:0000063!8.57e-11!578;CL:0000134!7.61e-10!358;CL:0002320!1.58e-09!365;CL:0000094!5.09e-09!8;CL:0000003!1.09e-08!722;CL:0000219!1.90e-08!390;CL:0000012!5.91e-08!682;CL:0000548!3.37e-07!679;CL:0000004!3.37e-07!679;CL:0000255!3.37e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-87;33!CL:0002057;2.63e-87;33!CL:0000473;1.59e-60;39!CL:0000234;1.59e-60;39!CL:0000576;3.77e-59;48!CL:0000766;4.35e-47;69!CL:0000763;7.45e-21;100!CL:0000094;7.25e-20;8!CL:0002393;8.80e-20;6!CL:0002397;8.80e-20;6!CL:0002087;1.18e-17;104!CL:0000738;1.56e-14;136!CL:0000081;3.94e-14;11!CL:0000767;1.02e-10;3!CL:0000226;1.08e-09;3!CL:0000842;1.08e-09;3!CL:0000988;8.94e-09;177!CL:0000771;4.05e-08;2!CL:0000219;3.46e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.03e-112,42;CL:0002057,9.03e-112,42;CL:0000766,5.06e-99,72;CL:0000473,1.81e-96,48;CL:0000234,1.81e-96,48;CL:0000557,3.02e-80,67;CL:0000839,1.14e-77,66;CL:0002009,3.15e-76,61;CL:0002194,4.75e-75,59;CL:0000576,4.75e-75,59;CL:0000040,4.75e-75,59;CL:0000559,4.75e-75,59;CL:0000738,9.40e-66,136;CL:0000763,4.28e-65,108;CL:0000049,4.28e-65,108;CL:0000037,7.96e-51,168;CL:0000988,1.36e-47,177;CL:0002031,1.67e-46,120;CL:0002087,2.46e-46,115;CL:0002032,2.44e-45,161;CL:0000837,2.44e-45,161;CL:0000134,4.07e-20,354;CL:0000094,6.49e-20,8;CL:0002320,1.82e-19,361;CL:0000219,3.56e-17,386;CL:0002393,4.71e-17,9;CL:0002397,4.71e-17,9;CL:0000034,4.27e-15,441;CL:0000048,2.26e-14,427;CL:0000081,3.64e-14,11;CL:0000723,5.50e-14,433;CL:0000767,8.87e-11,3;CL:0000226,1.06e-09,3;CL:0000842,1.06e-09,3;CL:0000771,4.05e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.91e-80;42!CL:0000049;2.35e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.03e-32!80;UBERON:0001474!4.19e-30!86;UBERON:0004765!3.55e-29!101;UBERON:0001434!3.55e-29!101;UBERON:0002390!1.91e-27!102;UBERON:0003061!1.91e-27!102;UBERON:0002193!2.84e-25!112;UBERON:0002405!2.46e-21!115;UBERON:0002204!2.63e-13!167;UBERON:0002384!5.29e-09!375;UBERON:0003081!1.65e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-69,76;UBERON:0001474,1.08e-63,82;UBERON:0002390,9.98e-60,98;UBERON:0003061,9.98e-60,98;UBERON:0004765,4.26e-57,90;UBERON:0002405,6.50e-55,93;UBERON:0002193,3.64e-53,108;UBERON:0001434,2.53e-50,100;UBERON:0002204,8.89e-26,167;UBERON:0003081,3.37e-24,203;UBERON:0002384,1.40e-18,371;UBERON:0000926,2.88e-12,315;UBERON:0004120,2.88e-12,315;UBERON:0006603,2.88e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2558707016101,4.98978217526377,13.7786349751308,0,0.30120591877825,1.47901604066715,0,0,0,21.0518255242113,19.4528114046037,26.9093479687656,0,0,0,2.18097358169347,2.26725566213286,3.15359279544161,4.18372266430232,2.05583944010913,6.19412741790207,6.32923263108731,4.09857130446561,8.0403958162119,18.961012440514,14.2006630388442,23.0225027210381,3.9530891303947,1.91034305040492,5.61808711112712,16.5285301880287,11.2325159476633,14.0654167675789,1.9791078011203,1.59570926097305,3.83602275479425,9.57690487474327,6.80862269629368,8.71951148593805,4.01997864410789,3.12889751052121,6.29847649644838,8.47559303686716,5.52416453981347,16.456044146926,4.85887158517466,9.99240209835705,6.9187353017764,7.07670376222919,4.8056605709282,4.33959084082116,1.14005097496499,0.59675003159727,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0.557052284425868,0.294605907474837,0,0,0.128091319725675,0.390178042679635,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,1.05402583354441,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,27.1446184903828,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,9.53709331487551,5.47655822984453,8.58448547299384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.591092280605782,1.50939302401662,2.31017465303547,0,0,0,0,0,4.49404214368309,0,12.4324654030811,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,1.44737618286021,5.1771408196468,4.802740101155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0,0,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,1.07791637155815,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0,0,0.288109595976299,0,0.707082103850386,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.449947783103001,4.6428117273477,0,0,0,0,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0.344429959321631,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.577628330751691,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.667388411352415,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.481448200135009,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2558707016101,4.98978217526377,13.7786349751308,0,0.30120591877825,1.47901604066715,0,0,0,21.0518255242113,19.4528114046037,26.9093479687656,0,0,0,2.18097358169347,2.26725566213286,3.15359279544161,4.18372266430232,2.05583944010913,6.19412741790207,6.32923263108731,4.09857130446561,8.0403958162119,18.961012440514,14.2006630388442,23.0225027210381,3.9530891303947,1.91034305040492,5.61808711112712,16.5285301880287,11.2325159476633,14.0654167675789,1.9791078011203,1.59570926097305,3.83602275479425,9.57690487474327,6.80862269629368,8.71951148593805,4.01997864410789,3.12889751052121,6.29847649644838,8.47559303686716,5.52416453981347,16.456044146926,4.85887158517466,9.99240209835705,6.9187353017764,7.07670376222919,4.8056605709282,4.33959084082116,1.14005097496499,0.59675003159727,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0.557052284425868,0.294605907474837,0,0,0.128091319725675,0.390178042679635,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,1.05402583354441,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,27.1446184903828,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,9.53709331487551,5.47655822984453,8.58448547299384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.591092280605782,1.50939302401662,2.31017465303547,0,0,0,0,0,4.49404214368309,0,12.4324654030811,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,1.44737618286021,5.1771408196468,4.802740101155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0,0,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,1.07791637155815,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0,0,0.288109595976299,0,0.707082103850386,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.449947783103001,4.6428117273477,0,0,0,0,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0.344429959321631,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.577628330751691,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.667388411352415,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.481448200135009,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr11:2954660..2954687,- | |||
}} | }} |
Latest revision as of 21:23, 23 July 2015
Short description: | p@chr11:2954660..2954687, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2954660..2954687, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-69 | 76 |
bone element | 1.08e-63 | 82 |
hematopoietic system | 9.98e-60 | 98 |
blood island | 9.98e-60 | 98 |
skeletal element | 4.26e-57 | 90 |
immune system | 6.50e-55 | 93 |
hemolymphoid system | 3.64e-53 | 108 |
skeletal system | 2.53e-50 | 100 |
musculoskeletal system | 8.89e-26 | 167 |
lateral plate mesoderm | 3.37e-24 | 203 |
connective tissue | 1.40e-18 | 371 |
mesoderm | 2.88e-12 | 315 |
mesoderm-derived structure | 2.88e-12 | 315 |
presumptive mesoderm | 2.88e-12 | 315 |