FFCP PHASE1:Hg19::chr11:63486554..63486560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:63486554..63486560,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr11:63486554..63486560,+ | |description=CAGE_peak_at_chr11:63486554..63486560,+ | ||
|id=chr11:63486554..63486560,+ | |id=chr11:63486554..63486560,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.91e-22!34;UBERON:0003528!6.91e-22!34;UBERON:0001869!2.39e-21!32;UBERON:0001049!3.05e-21!57;UBERON:0005068!3.05e-21!57;UBERON:0006241!3.05e-21!57;UBERON:0007135!3.05e-21!57;UBERON:0000955!2.51e-20!69;UBERON:0006238!2.51e-20!69;UBERON:0002616!3.04e-20!59;UBERON:0001893!9.01e-20!34;UBERON:0002780!2.84e-19!41;UBERON:0001890!2.84e-19!41;UBERON:0006240!2.84e-19!41;UBERON:0003080!1.15e-18!42;UBERON:0001017!2.22e-18!82;UBERON:0002791!2.53e-18!33;UBERON:0000073!8.87e-18!94;UBERON:0001016!8.87e-18!94;UBERON:0005743!4.28e-17!86;UBERON:0002619!1.99e-16!22;UBERON:0001950!4.77e-16!20;UBERON:0000956!5.54e-16!25;UBERON:0000203!5.54e-16!25;UBERON:0003075!1.03e-14!86;UBERON:0007284!1.03e-14!86;UBERON:0002346!1.13e-13!90;UBERON:0003056!1.47e-13!61;UBERON:0000153!2.88e-12!129;UBERON:0007811!2.88e-12!129;UBERON:0000200!4.08e-12!6;UBERON:0000033!1.31e-11!123;UBERON:0004121!1.97e-09!169;UBERON:0000924!5.60e-09!173;UBERON:0006601!5.60e-09!173;UBERON:0002308!2.22e-07!9;UBERON:0000125!2.22e-07!9;UBERON:0002021!3.30e-07!5;UBERON:0002771!5.19e-07!3;UBERON:0000988!5.30e-07!3;UBERON:0007023!9.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.74e-50;2!UBERON:0002021;5.15e-21;5!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000200;7.67e-18;6!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0001871;1.65e-15;6!UBERON:0001893;1.90e-14;34!UBERON:0002791;1.84e-13;32!UBERON:0001869;1.84e-13;32!UBERON:0003528;1.70e-11;34!UBERON:0002020;1.70e-11;34!UBERON:0002780;3.45e-07;41!UBERON:0001890;3.45e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.74e-50,2;UBERON:0002021,5.15e-21,5;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000200,7.67e-18,6;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0001871,1.65e-15,6;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p@chr11:63486554..63486560,+ | |short_description=p@chr11:63486554..63486560,+ | ||
}} | }} |
Latest revision as of 00:01, 24 July 2015
Short description: | p@chr11:63486554..63486560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:63486554..63486560, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.74e-50 | 2 |
occipital lobe | 5.15e-21 | 5 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
temporal lobe | 1.65e-15 | 6 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |