FFCP PHASE1:Hg19::chr11:64107610..64107648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:64107610..64107648,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_at_chr11:64107610..64107648,- | |description=CAGE_peak_at_chr11:64107610..64107648,- | ||
|id=chr11:64107610..64107648,- | |id=chr11:64107610..64107648,- | ||
|ontology_enrichment_celltype=CL:0000738!1.57e-70!140;CL:0000037!4.21e-65!172;CL:0000566!4.21e-65!172;CL:0000988!1.16e-63!182;CL:0002032!1.08e-61!165;CL:0000837!1.08e-61!165;CL:0002087!1.45e-61!119;CL:0002031!5.46e-61!124;CL:0000542!1.62e-50!53;CL:0000051!1.62e-50!53;CL:0000838!5.24e-50!52;CL:0000084!1.17e-24!25;CL:0000827!1.17e-24!25;CL:0000945!5.08e-23!24;CL:0000826!5.08e-23!24;CL:0000791!6.58e-21!18;CL:0000789!6.58e-21!18;CL:0002420!6.58e-21!18;CL:0002419!6.58e-21!18;CL:0000790!6.58e-21!18;CL:0000766!2.66e-19!76;CL:0000763!1.08e-18!112;CL:0000049!1.08e-18!112;CL:0000839!2.85e-17!70;CL:0002057!1.57e-16!42;CL:0000557!6.12e-16!71;CL:0000860!8.98e-15!45;CL:0002194!4.15e-14!63;CL:0000576!4.15e-14!63;CL:0000040!4.15e-14!63;CL:0000559!4.15e-14!63;CL:0000236!5.92e-14!14;CL:0000625!1.60e-13!11;CL:0002009!2.49e-13!65;CL:0000134!3.45e-13!358;CL:0002320!2.43e-12!365;CL:0000219!1.92e-09!390;CL:0000624!8.01e-08!6;CL:0002393!3.96e-07!9;CL:0002397!3.96e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.57e-70!140;CL:0000037!4.21e-65!172;CL:0000566!4.21e-65!172;CL:0000988!1.16e-63!182;CL:0002032!1.08e-61!165;CL:0000837!1.08e-61!165;CL:0002087!1.45e-61!119;CL:0002031!5.46e-61!124;CL:0000542!1.62e-50!53;CL:0000051!1.62e-50!53;CL:0000838!5.24e-50!52;CL:0000084!1.17e-24!25;CL:0000827!1.17e-24!25;CL:0000945!5.08e-23!24;CL:0000826!5.08e-23!24;CL:0000791!6.58e-21!18;CL:0000789!6.58e-21!18;CL:0002420!6.58e-21!18;CL:0002419!6.58e-21!18;CL:0000790!6.58e-21!18;CL:0000766!2.66e-19!76;CL:0000763!1.08e-18!112;CL:0000049!1.08e-18!112;CL:0000839!2.85e-17!70;CL:0002057!1.57e-16!42;CL:0000557!6.12e-16!71;CL:0000860!8.98e-15!45;CL:0002194!4.15e-14!63;CL:0000576!4.15e-14!63;CL:0000040!4.15e-14!63;CL:0000559!4.15e-14!63;CL:0000236!5.92e-14!14;CL:0000625!1.60e-13!11;CL:0002009!2.49e-13!65;CL:0000134!3.45e-13!358;CL:0002320!2.43e-12!365;CL:0000219!1.92e-09!390;CL:0000624!8.01e-08!6;CL:0002393!3.96e-07!9;CL:0002397!3.96e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.52e-39;53!CL:0000084;1.09e-35;25!CL:0000791;1.54e-34;18!CL:0000789;1.54e-34;18!CL:0002419;1.54e-34;18!CL:0000945;1.92e-27;24!CL:0000625;4.40e-22;11!CL:0000236;5.48e-19;13!CL:0002087;8.33e-15;104!CL:0000624;4.15e-12;6!CL:0000738;5.62e-09;136!CL:0000988;3.07e-07;177!CL:0000898;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.38e-68,52;CL:0000542,2.91e-66,53;CL:0000051,2.91e-66,53;CL:0000738,8.82e-45,136;CL:0002087,2.83e-44,115;CL:0002031,1.50e-43,120;CL:0000037,4.97e-37,168;CL:0002032,2.39e-36,161;CL:0000837,2.39e-36,161;CL:0000084,6.31e-36,25;CL:0000827,6.31e-36,25;CL:0000988,1.57e-35,177;CL:0000791,1.07e-34,18;CL:0000789,1.07e-34,18;CL:0002420,1.07e-34,18;CL:0002419,1.07e-34,18;CL:0000790,1.07e-34,18;CL:0000945,2.47e-27,24;CL:0000826,2.47e-27,24;CL:0000625,5.15e-22,11;CL:0000236,2.30e-20,14;CL:0000624,2.86e-12,6;CL:0000134,1.10e-08,354;CL:0002320,3.20e-08,361;CL:0000898,4.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.52e-39;53!CL:0000790;1.54e-34;18 | |||
|ontology_enrichment_disease=DOID:2531!5.46e-10!51;DOID:0060083!5.46e-10!51;DOID:0060058!3.66e-08!10 | |ontology_enrichment_disease=DOID:2531!5.46e-10!51;DOID:0060083!5.46e-10!51;DOID:0060058!3.66e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-28!102;UBERON:0003061!1.16e-28!102;UBERON:0002193!1.71e-26!112;UBERON:0002371!8.57e-14!80;UBERON:0000178!1.77e-13!15;UBERON:0000179!1.77e-13!15;UBERON:0000463!1.77e-13!15;UBERON:0001474!5.92e-12!86;UBERON:0002405!7.47e-12!115;UBERON:0002384!3.35e-11!375;UBERON:0004765!1.95e-08!101;UBERON:0001434!1.95e-08!101;UBERON:0004177!3.30e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.06e-12;15!UBERON:0000179;7.06e-12;15!UBERON:0000463;7.06e-12;15!UBERON:0002390;1.00e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.33e-12,15;UBERON:0000179,5.33e-12,15;UBERON:0000463,5.33e-12,15;UBERON:0002390,1.00e-10,98;UBERON:0003061,1.00e-10,98;UBERON:0002193,1.16e-10,108;UBERON:0002370,1.90e-09,4;UBERON:0005058,1.90e-09,4;UBERON:0009113,1.90e-09,4;UBERON:0003295,1.90e-09,4;UBERON:0005562,1.90e-09,4;UBERON:0002384,1.35e-07,371;UBERON:0004177,1.56e-07,7;UBERON:0005057,1.56e-07,7 | |||
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|short_description=p@chr11:64107610..64107648,- | |short_description=p@chr11:64107610..64107648,- | ||
}} | }} |
Latest revision as of 00:13, 24 July 2015
Short description: | p@chr11:64107610..64107648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64107610..64107648, - |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.38e-68 | 52 |
lymphocyte | 2.91e-66 | 53 |
common lymphoid progenitor | 2.91e-66 | 53 |
leukocyte | 8.82e-45 | 136 |
nongranular leukocyte | 2.83e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 1.50e-43 | 120 |
hematopoietic stem cell | 4.97e-37 | 168 |
hematopoietic oligopotent progenitor cell | 2.39e-36 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-36 | 161 |
T cell | 6.31e-36 | 25 |
pro-T cell | 6.31e-36 | 25 |
hematopoietic cell | 1.57e-35 | 177 |
mature alpha-beta T cell | 1.07e-34 | 18 |
alpha-beta T cell | 1.07e-34 | 18 |
immature T cell | 1.07e-34 | 18 |
mature T cell | 1.07e-34 | 18 |
immature alpha-beta T cell | 1.07e-34 | 18 |
lymphocyte of B lineage | 2.47e-27 | 24 |
pro-B cell | 2.47e-27 | 24 |
CD8-positive, alpha-beta T cell | 5.15e-22 | 11 |
B cell | 2.30e-20 | 14 |
CD4-positive, alpha-beta T cell | 2.86e-12 | 6 |
mesenchymal cell | 1.10e-08 | 354 |
connective tissue cell | 3.20e-08 | 361 |
naive T cell | 4.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.33e-12 | 15 |
haemolymphatic fluid | 5.33e-12 | 15 |
organism substance | 5.33e-12 | 15 |
hematopoietic system | 1.00e-10 | 98 |
blood island | 1.00e-10 | 98 |
hemolymphoid system | 1.16e-10 | 108 |
thymus | 1.90e-09 | 4 |
hemolymphoid system gland | 1.90e-09 | 4 |
thymic region | 1.90e-09 | 4 |
pharyngeal gland | 1.90e-09 | 4 |
thymus primordium | 1.90e-09 | 4 |
connective tissue | 1.35e-07 | 371 |
hemopoietic organ | 1.56e-07 | 7 |
immune organ | 1.56e-07 | 7 |