FFCP PHASE1:Hg19::chr11:64107610..64107648,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:64107610..64107648,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_at_chr11:64107610..64107648,- | |||
|id=chr11:64107610..64107648,- | |||
|ontology_enrichment_celltype=CL:0000738!1.57e-70!140;CL:0000037!4.21e-65!172;CL:0000566!4.21e-65!172;CL:0000988!1.16e-63!182;CL:0002032!1.08e-61!165;CL:0000837!1.08e-61!165;CL:0002087!1.45e-61!119;CL:0002031!5.46e-61!124;CL:0000542!1.62e-50!53;CL:0000051!1.62e-50!53;CL:0000838!5.24e-50!52;CL:0000084!1.17e-24!25;CL:0000827!1.17e-24!25;CL:0000945!5.08e-23!24;CL:0000826!5.08e-23!24;CL:0000791!6.58e-21!18;CL:0000789!6.58e-21!18;CL:0002420!6.58e-21!18;CL:0002419!6.58e-21!18;CL:0000790!6.58e-21!18;CL:0000766!2.66e-19!76;CL:0000763!1.08e-18!112;CL:0000049!1.08e-18!112;CL:0000839!2.85e-17!70;CL:0002057!1.57e-16!42;CL:0000557!6.12e-16!71;CL:0000860!8.98e-15!45;CL:0002194!4.15e-14!63;CL:0000576!4.15e-14!63;CL:0000040!4.15e-14!63;CL:0000559!4.15e-14!63;CL:0000236!5.92e-14!14;CL:0000625!1.60e-13!11;CL:0002009!2.49e-13!65;CL:0000134!3.45e-13!358;CL:0002320!2.43e-12!365;CL:0000219!1.92e-09!390;CL:0000624!8.01e-08!6;CL:0002393!3.96e-07!9;CL:0002397!3.96e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.52e-39;53!CL:0000084;1.09e-35;25!CL:0000791;1.54e-34;18!CL:0000789;1.54e-34;18!CL:0002419;1.54e-34;18!CL:0000945;1.92e-27;24!CL:0000625;4.40e-22;11!CL:0000236;5.48e-19;13!CL:0002087;8.33e-15;104!CL:0000624;4.15e-12;6!CL:0000738;5.62e-09;136!CL:0000988;3.07e-07;177!CL:0000898;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.38e-68,52;CL:0000542,2.91e-66,53;CL:0000051,2.91e-66,53;CL:0000738,8.82e-45,136;CL:0002087,2.83e-44,115;CL:0002031,1.50e-43,120;CL:0000037,4.97e-37,168;CL:0002032,2.39e-36,161;CL:0000837,2.39e-36,161;CL:0000084,6.31e-36,25;CL:0000827,6.31e-36,25;CL:0000988,1.57e-35,177;CL:0000791,1.07e-34,18;CL:0000789,1.07e-34,18;CL:0002420,1.07e-34,18;CL:0002419,1.07e-34,18;CL:0000790,1.07e-34,18;CL:0000945,2.47e-27,24;CL:0000826,2.47e-27,24;CL:0000625,5.15e-22,11;CL:0000236,2.30e-20,14;CL:0000624,2.86e-12,6;CL:0000134,1.10e-08,354;CL:0002320,3.20e-08,361;CL:0000898,4.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.52e-39;53!CL:0000790;1.54e-34;18 | |||
|ontology_enrichment_disease=DOID:2531!5.46e-10!51;DOID:0060083!5.46e-10!51;DOID:0060058!3.66e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-28!102;UBERON:0003061!1.16e-28!102;UBERON:0002193!1.71e-26!112;UBERON:0002371!8.57e-14!80;UBERON:0000178!1.77e-13!15;UBERON:0000179!1.77e-13!15;UBERON:0000463!1.77e-13!15;UBERON:0001474!5.92e-12!86;UBERON:0002405!7.47e-12!115;UBERON:0002384!3.35e-11!375;UBERON:0004765!1.95e-08!101;UBERON:0001434!1.95e-08!101;UBERON:0004177!3.30e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.06e-12;15!UBERON:0000179;7.06e-12;15!UBERON:0000463;7.06e-12;15!UBERON:0002390;1.00e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.33e-12,15;UBERON:0000179,5.33e-12,15;UBERON:0000463,5.33e-12,15;UBERON:0002390,1.00e-10,98;UBERON:0003061,1.00e-10,98;UBERON:0002193,1.16e-10,108;UBERON:0002370,1.90e-09,4;UBERON:0005058,1.90e-09,4;UBERON:0009113,1.90e-09,4;UBERON:0003295,1.90e-09,4;UBERON:0005562,1.90e-09,4;UBERON:0002384,1.35e-07,371;UBERON:0004177,1.56e-07,7;UBERON:0005057,1.56e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,0.985207073399349,1.25937250101887,1.96682138424452,1.91914699048606,0.619264493264304,0,0,0,2.78881922089086,0.568676929949686,0,1.10799081706375,1.80490002723128,2.17010870715852,0,0,0.257575567634187,0.872389432677388,0.377875943688809,0,0.697287110717054,0,0.619412741790207,0,1.7931249457037,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0,1.22433556948361,0,1.27867425159808,0.329851300186716,0,0.426224750532694,0.580418477257168,1.13477044938228,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,1.26584954976354,0.422510572623884,0,0.838634582033504,1.23561494261145,0.450530678524519,0.16072558669708,1.99508920618874,0.79566670879636,1.0959849225878,7.03984977845291,3.27683166757279,7.11607403090844,1.70692089026603,4.00395987036012,6.32227683949932,7.93253847341835,6.67837628174755,2.27685187643779,2.34894875748376,1.14681968437569,1.32171328579026,0.560508562981536,0.263384084775077,2.75393678159366,3.14408610199332,1.43921049299656,3.34372990781356,2.28145586643513,3.31413464014313,1.94826728407911,4.34500781852177,3.82987679717288,3.76607620792156,2.70803863765016,6.14838334683241,8.19373889627233,3.4531959966772,6.35605040907451,3.18783394308558,3.85545064221357,1.60524496853828,6.27213142829861,3.51258962362455,1.91610246800961,2.06176467289578,3.03623630423403,3.50421955756506,3.90650072313851,3.8018081777935,1.20460095262218,1.27986611154418,4.99722906209383,4.49876778883632,8.21127996921047,2.01606743224732,1.60464117470104,4.05508330871837,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.76096868026452,0.414656231081544,0.720599767084807,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92298003977345,1.18218456121156,1.94064817373566,2.31017465303547,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,5.35246044999663,1.70894156152249,2.62054953003568,2.05681136543097,3.8908398671563,1.62009431171434,3.96562588147135,0,0,0,0.185803175125719,0,0.569134746787313,0.159426272728822,0.199579371432817,0.191505370132367,0.423347165447766,0,0.561594356226918,0.228234679033192,0,0,0,0,0,0.425846237690326,1.37402137902306,1.53620382154229,0.671028323677248,1.00109485027145,0,0,0,0,0,0,0,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,1.10776324914963,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.470940769185074,1.16348177330109,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.889563386041866,1.23563938946503,0.939797545549098,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.89176089707246,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,1.9846640872478,0.395223263795889,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.654261577023377,0,0,0,1.59989916683944,0.106691729694141,5.68309432880692,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,2.05040537003259,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,1.03382309777839,0.773494655682926,0.399764623699716,0,0,0,0,0.917458566809082,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,5.16711278688049,4.22108057211834,0,0,0,0.217716747896961,0,1.0776328482334,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.40891655513718,2.8851164307291 | |||
|short_description=p@chr11:64107610..64107648,- | |||
}} |
Latest revision as of 00:13, 24 July 2015
Short description: | p@chr11:64107610..64107648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64107610..64107648, - |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.38e-68 | 52 |
lymphocyte | 2.91e-66 | 53 |
common lymphoid progenitor | 2.91e-66 | 53 |
leukocyte | 8.82e-45 | 136 |
nongranular leukocyte | 2.83e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 1.50e-43 | 120 |
hematopoietic stem cell | 4.97e-37 | 168 |
hematopoietic oligopotent progenitor cell | 2.39e-36 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-36 | 161 |
T cell | 6.31e-36 | 25 |
pro-T cell | 6.31e-36 | 25 |
hematopoietic cell | 1.57e-35 | 177 |
mature alpha-beta T cell | 1.07e-34 | 18 |
alpha-beta T cell | 1.07e-34 | 18 |
immature T cell | 1.07e-34 | 18 |
mature T cell | 1.07e-34 | 18 |
immature alpha-beta T cell | 1.07e-34 | 18 |
lymphocyte of B lineage | 2.47e-27 | 24 |
pro-B cell | 2.47e-27 | 24 |
CD8-positive, alpha-beta T cell | 5.15e-22 | 11 |
B cell | 2.30e-20 | 14 |
CD4-positive, alpha-beta T cell | 2.86e-12 | 6 |
mesenchymal cell | 1.10e-08 | 354 |
connective tissue cell | 3.20e-08 | 361 |
naive T cell | 4.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.33e-12 | 15 |
haemolymphatic fluid | 5.33e-12 | 15 |
organism substance | 5.33e-12 | 15 |
hematopoietic system | 1.00e-10 | 98 |
blood island | 1.00e-10 | 98 |
hemolymphoid system | 1.16e-10 | 108 |
thymus | 1.90e-09 | 4 |
hemolymphoid system gland | 1.90e-09 | 4 |
thymic region | 1.90e-09 | 4 |
pharyngeal gland | 1.90e-09 | 4 |
thymus primordium | 1.90e-09 | 4 |
connective tissue | 1.35e-07 | 371 |
hemopoietic organ | 1.56e-07 | 7 |
immune organ | 1.56e-07 | 7 |