FFCP PHASE1:Hg19::chr11:65153902..65153912,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65153902..65153912,- | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_at_chr11:65153902..65153912,- | |description=CAGE_peak_at_chr11:65153902..65153912,- | ||
|id=chr11:65153902..65153912,- | |id=chr11:65153902..65153912,- | ||
|ontology_enrichment_celltype=CL:0002057!3.87e-55!42;CL:0000860!1.93e-50!45;CL:0000738!7.68e-44!140;CL:0002031!2.49e-39!124;CL:0000766!2.30e-38!76;CL:0002087!3.97e-37!119;CL:0000557!3.59e-36!71;CL:0000037!1.61e-35!172;CL:0000566!1.61e-35!172;CL:0002009!3.46e-35!65;CL:0000839!1.21e-34!70;CL:0002032!2.42e-34!165;CL:0000837!2.42e-34!165;CL:0000988!3.41e-33!182;CL:0002194!1.10e-32!63;CL:0000576!1.10e-32!63;CL:0000040!1.10e-32!63;CL:0000559!1.10e-32!63;CL:0000763!7.30e-29!112;CL:0000049!7.30e-29!112;CL:0000134!1.13e-14!358;CL:0002320!6.86e-14!365;CL:0002393!4.92e-13!9;CL:0002397!4.92e-13!9;CL:0000219!3.54e-11!390;CL:0000048!6.92e-09!430;CL:0000034!7.64e-09!444;CL:0000624!8.57e-09!6;CL:0000723!1.96e-08!436;CL:0000791!1.07e-07!18;CL:0000789!1.07e-07!18;CL:0002420!1.07e-07!18;CL:0002419!1.07e-07!18;CL:0000790!1.07e-07!18 | |ontology_enrichment_celltype=CL:0002057!3.87e-55!42;CL:0000860!1.93e-50!45;CL:0000738!7.68e-44!140;CL:0002031!2.49e-39!124;CL:0000766!2.30e-38!76;CL:0002087!3.97e-37!119;CL:0000557!3.59e-36!71;CL:0000037!1.61e-35!172;CL:0000566!1.61e-35!172;CL:0002009!3.46e-35!65;CL:0000839!1.21e-34!70;CL:0002032!2.42e-34!165;CL:0000837!2.42e-34!165;CL:0000988!3.41e-33!182;CL:0002194!1.10e-32!63;CL:0000576!1.10e-32!63;CL:0000040!1.10e-32!63;CL:0000559!1.10e-32!63;CL:0000763!7.30e-29!112;CL:0000049!7.30e-29!112;CL:0000134!1.13e-14!358;CL:0002320!6.86e-14!365;CL:0002393!4.92e-13!9;CL:0002397!4.92e-13!9;CL:0000219!3.54e-11!390;CL:0000048!6.92e-09!430;CL:0000034!7.64e-09!444;CL:0000624!8.57e-09!6;CL:0000723!1.96e-08!436;CL:0000791!1.07e-07!18;CL:0000789!1.07e-07!18;CL:0002420!1.07e-07!18;CL:0002419!1.07e-07!18;CL:0000790!1.07e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.92e-55;33!CL:0002057;5.92e-55;33!CL:0000473;1.05e-36;39!CL:0000234;1.05e-36;39!CL:0000576;7.82e-31;48!CL:0000766;2.48e-23;69!CL:0002087;6.89e-16;104!CL:0000623;1.43e-13;3!CL:0000763;5.02e-10;100!CL:0000738;2.65e-09;136!CL:0000094;1.90e-08;8!CL:0000988;4.08e-08;177!CL:0002393;7.88e-07;6!CL:0002397;7.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-59,42;CL:0002057,1.38e-59,42;CL:0000473,2.50e-51,48;CL:0000234,2.50e-51,48;CL:0000738,1.97e-46,136;CL:0000766,2.11e-46,72;CL:0002009,9.59e-42,61;CL:0002031,1.80e-40,120;CL:0000557,2.10e-40,67;CL:0002087,4.67e-40,115;CL:0002194,9.10e-40,59;CL:0000576,9.10e-40,59;CL:0000040,9.10e-40,59;CL:0000559,9.10e-40,59;CL:0000839,8.66e-38,66;CL:0000037,6.68e-36,168;CL:0002032,8.92e-36,161;CL:0000837,8.92e-36,161;CL:0000988,1.28e-33,177;CL:0000763,6.48e-31,108;CL:0000049,6.48e-31,108;CL:0000134,5.50e-15,354;CL:0002320,1.65e-14,361;CL:0000623,9.29e-14,3;CL:0000825,9.29e-14,3;CL:0000219,7.85e-13,386;CL:0000034,7.92e-12,441;CL:0000048,8.90e-11,427;CL:0000723,1.71e-10,433;CL:0000094,1.94e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.30e-44;42!CL:0000049;1.87e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.52e-33!102;UBERON:0003061!6.52e-33!102;UBERON:0002371!9.46e-32!80;UBERON:0001474!1.98e-28!86;UBERON:0002193!2.46e-28!112;UBERON:0004765!4.72e-23!101;UBERON:0001434!4.72e-23!101;UBERON:0002405!2.80e-19!115;UBERON:0002384!7.86e-13!375;UBERON:0003081!4.35e-11!216;UBERON:0002204!1.36e-10!167 | |ontology_enrichment_uberon=UBERON:0002390!6.52e-33!102;UBERON:0003061!6.52e-33!102;UBERON:0002371!9.46e-32!80;UBERON:0001474!1.98e-28!86;UBERON:0002193!2.46e-28!112;UBERON:0004765!4.72e-23!101;UBERON:0001434!4.72e-23!101;UBERON:0002405!2.80e-19!115;UBERON:0002384!7.86e-13!375;UBERON:0003081!4.35e-11!216;UBERON:0002204!1.36e-10!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.07e-35,76;UBERON:0001474,7.38e-32,82;UBERON:0004765,1.87e-28,90;UBERON:0002390,9.43e-28,98;UBERON:0003061,9.43e-28,98;UBERON:0002405,2.50e-27,93;UBERON:0001434,5.83e-25,100;UBERON:0002193,1.47e-24,108;UBERON:0002384,7.35e-14,371;UBERON:0002204,2.42e-12,167;UBERON:0003081,7.27e-11,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,2.68680578668049,0.619264493264304,0,0,0.369754010166788,0,0,0,2.76997704265939,2.00544447470142,0.868043482863407,0.223915474239924,0,0,1.45398238779565,0.755751887377619,0.970336244751265,1.39457422143411,1.6446715520873,2.16794459626573,3.16461631554365,1.7931249457037,2.36482229888585,2.06847408441971,1.93645405075148,0,1.31769637679823,1.09162460023138,2.02251136000576,2.14258724659632,1.60464513538047,1.27867425159808,0.989553900560148,1.59570926097305,0.426224750532694,1.7412554317715,0.56738522469114,1.86846674698672,0.502497330513487,1.5644487552606,5.64690996233303,0.605399502633369,1.84138817993782,2.21523671208619,0.845021145247767,1.06302149982522,0.628975936525128,1.12328631146495,0.450530678524519,0.16072558669708,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0,1.28019066769952,0,0.574752439954483,0.661044872784862,0,0,1.76171156811282,0,3.96513985737078,1.68152568894461,0,1.37696839079683,1.57204305099666,1.64481199199607,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0.541607727530031,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,2.40696176205157,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,1.77327684181734,4.09692392233083,5.13372145118993,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.320182673410333,0.606255142892519,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,1.22864280839693,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,8.51182150013745,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,2.68680578668049,0.619264493264304,0,0,0.369754010166788,0,0,0,2.76997704265939,2.00544447470142,0.868043482863407,0.223915474239924,0,0,1.45398238779565,0.755751887377619,0.970336244751265,1.39457422143411,1.6446715520873,2.16794459626573,3.16461631554365,1.7931249457037,2.36482229888585,2.06847408441971,1.93645405075148,0,1.31769637679823,1.09162460023138,2.02251136000576,2.14258724659632,1.60464513538047,1.27867425159808,0.989553900560148,1.59570926097305,0.426224750532694,1.7412554317715,0.56738522469114,1.86846674698672,0.502497330513487,1.5644487552606,5.64690996233303,0.605399502633369,1.84138817993782,2.21523671208619,0.845021145247767,1.06302149982522,0.628975936525128,1.12328631146495,0.450530678524519,0.16072558669708,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0,1.28019066769952,0,0.574752439954483,0.661044872784862,0,0,1.76171156811282,0,3.96513985737078,1.68152568894461,0,1.37696839079683,1.57204305099666,1.64481199199607,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0.541607727530031,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,2.40696176205157,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,1.77327684181734,4.09692392233083,5.13372145118993,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.320182673410333,0.606255142892519,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,1.22864280839693,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,8.51182150013745,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:65153902..65153912,- | |short_description=p@chr11:65153902..65153912,- | ||
}} | }} |
Latest revision as of 00:32, 24 July 2015
Short description: | p@chr11:65153902..65153912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65153902..65153912, - |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-59 | 42 |
defensive cell | 2.50e-51 | 48 |
phagocyte | 2.50e-51 | 48 |
leukocyte | 1.97e-46 | 136 |
myeloid leukocyte | 2.11e-46 | 72 |
macrophage dendritic cell progenitor | 9.59e-42 | 61 |
hematopoietic lineage restricted progenitor cell | 1.80e-40 | 120 |
granulocyte monocyte progenitor cell | 2.10e-40 | 67 |
nongranular leukocyte | 4.67e-40 | 115 |
monopoietic cell | 9.10e-40 | 59 |
monocyte | 9.10e-40 | 59 |
monoblast | 9.10e-40 | 59 |
promonocyte | 9.10e-40 | 59 |
myeloid lineage restricted progenitor cell | 8.66e-38 | 66 |
hematopoietic stem cell | 6.68e-36 | 168 |
hematopoietic oligopotent progenitor cell | 8.92e-36 | 161 |
hematopoietic multipotent progenitor cell | 8.92e-36 | 161 |
hematopoietic cell | 1.28e-33 | 177 |
myeloid cell | 6.48e-31 | 108 |
common myeloid progenitor | 6.48e-31 | 108 |
mesenchymal cell | 5.50e-15 | 354 |
connective tissue cell | 1.65e-14 | 361 |
natural killer cell | 9.29e-14 | 3 |
pro-NK cell | 9.29e-14 | 3 |
motile cell | 7.85e-13 | 386 |
stem cell | 7.92e-12 | 441 |
multi fate stem cell | 8.90e-11 | 427 |
somatic stem cell | 1.71e-10 | 433 |
granulocyte | 1.94e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.07e-35 | 76 |
bone element | 7.38e-32 | 82 |
skeletal element | 1.87e-28 | 90 |
hematopoietic system | 9.43e-28 | 98 |
blood island | 9.43e-28 | 98 |
immune system | 2.50e-27 | 93 |
skeletal system | 5.83e-25 | 100 |
hemolymphoid system | 1.47e-24 | 108 |
connective tissue | 7.35e-14 | 371 |
musculoskeletal system | 2.42e-12 | 167 |
lateral plate mesoderm | 7.27e-11 | 203 |