FFCP PHASE1:Hg19::chr12:105031679..105031700,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:105031679..105031700,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr12:105031679..105031700,+ | |||
|id=chr12:105031679..105031700,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.88e-66!76;CL:0002009!1.02e-55!65;CL:0002194!8.24e-55!63;CL:0000576!8.24e-55!63;CL:0000040!8.24e-55!63;CL:0000559!8.24e-55!63;CL:0000557!1.48e-52!71;CL:0002057!4.93e-52!42;CL:0000763!2.98e-51!112;CL:0000049!2.98e-51!112;CL:0000738!9.37e-51!140;CL:0000839!1.08e-50!70;CL:0000860!6.36e-48!45;CL:0000037!5.92e-40!172;CL:0000566!5.92e-40!172;CL:0000988!2.47e-38!182;CL:0002032!1.99e-37!165;CL:0000837!1.99e-37!165;CL:0002087!2.92e-36!119;CL:0002031!1.47e-32!124;CL:0000094!3.13e-16!8;CL:0002393!1.26e-15!9;CL:0002397!1.26e-15!9;CL:0000990!3.06e-13!8;CL:0000081!1.91e-11!11;CL:0000134!3.82e-11!358;CL:0002320!1.20e-10!365;CL:0000451!1.30e-10!10;CL:0000775!2.37e-09!3;CL:0000219!6.56e-09!390;CL:0000453!5.19e-08!5;CL:0002619!8.52e-08!3;CL:0000842!1.24e-07!3;CL:0000875!1.27e-07!3;CL:0002396!1.27e-07!3;CL:0000840!2.02e-07!5;CL:0001029!2.02e-07!5;CL:0000048!7.13e-07!430;CL:0000771!9.27e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.97e-32;8!CL:0000081;4.56e-23;11!CL:0000775;1.39e-22;3!CL:0000771;1.33e-15;2!CL:0000860;1.60e-14;33!CL:0002057;1.60e-14;33!CL:0000473;7.51e-14;39!CL:0000234;7.51e-14;39!CL:0000766;3.49e-11;69!CL:0000840;3.54e-11;5!CL:0000576;5.26e-09;48!CL:0000990;1.32e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.78e-34,72;CL:0000094,5.35e-32,8;CL:0000081,3.77e-23,11;CL:0000775,1.39e-22,3;CL:0000763,1.75e-21,108;CL:0000049,1.75e-21,108;CL:0002194,1.85e-19,59;CL:0000576,1.85e-19,59;CL:0000040,1.85e-19,59;CL:0000559,1.85e-19,59;CL:0002009,9.56e-19,61;CL:0000738,3.39e-18,136;CL:0000839,3.77e-17,66;CL:0000557,7.38e-17,67;CL:0000771,1.33e-15,2;CL:0000473,5.47e-15,48;CL:0000234,5.47e-15,48;CL:0000860,2.44e-14,42;CL:0002057,2.44e-14,42;CL:0000037,5.49e-14,168;CL:0002032,3.46e-13,161;CL:0000837,3.46e-13,161;CL:0000988,4.48e-13,177;CL:0000840,3.37e-11,5;CL:0001029,3.37e-11,5;CL:0002087,3.00e-10,115;CL:0002031,2.52e-08,120;CL:0000990,1.28e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-11;42!CL:0000049;9.29e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.08e-70!102;UBERON:0003061!3.08e-70!102;UBERON:0002193!1.29e-62!112;UBERON:0002371!2.49e-45!80;UBERON:0001474!2.38e-41!86;UBERON:0004765!1.83e-33!101;UBERON:0001434!1.83e-33!101;UBERON:0002405!1.10e-32!115;UBERON:0000178!1.89e-26!15;UBERON:0000179!1.89e-26!15;UBERON:0000463!1.89e-26!15;UBERON:0003081!4.14e-25!216;UBERON:0002204!1.22e-16!167;UBERON:0002384!5.69e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.45e-36;15!UBERON:0000179;5.45e-36;15!UBERON:0000463;5.45e-36;15!UBERON:0002390;8.19e-15;32!UBERON:0002193;4.03e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.00e-36,15;UBERON:0000179,4.00e-36,15;UBERON:0000463,4.00e-36,15;UBERON:0002390,2.46e-32,98;UBERON:0003061,2.46e-32,98;UBERON:0002193,5.53e-29,108;UBERON:0002371,1.40e-14,76;UBERON:0003081,1.71e-13,203;UBERON:0001474,2.47e-13,82;UBERON:0004765,6.26e-12,90;UBERON:0002405,1.82e-11,93;UBERON:0001434,1.73e-10,100;UBERON:0000926,3.67e-07,315;UBERON:0004120,3.67e-07,315;UBERON:0006603,3.67e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0.671746422719773,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,1.21292030593908,0.697287110717054,0,1.23882548358041,0,0,1.18241114944293,2.06847408441971,0,5.41705946377367,0.564727018627814,0.545812300115692,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0.622822248995575,1.7587406567972,1.0429658368404,2.38907729175628,0.605399502633369,0,0.632924774881769,0.633765858935825,0.212604299965044,0.209658645508376,0.561643155732475,0.300353785683013,1.12507910687956,1.14005097496499,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8945687238562,4.17911369518241,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,14.2311334549965,23.932916736322,24.0360997792901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,4.56702848308952,3.0585488285695,3.41788312304498,2.85878130549347,3.29089818468955,1.94541993357815,2.16012574895246,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:105031679..105031700,+ | |||
}} |
Latest revision as of 04:20, 24 July 2015
Short description: | p@chr12:105031679..105031700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105031679..105031700, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.78e-34 | 72 |
granulocyte | 5.35e-32 | 8 |
blood cell | 3.77e-23 | 11 |
neutrophil | 1.39e-22 | 3 |
myeloid cell | 1.75e-21 | 108 |
common myeloid progenitor | 1.75e-21 | 108 |
monopoietic cell | 1.85e-19 | 59 |
monocyte | 1.85e-19 | 59 |
monoblast | 1.85e-19 | 59 |
promonocyte | 1.85e-19 | 59 |
macrophage dendritic cell progenitor | 9.56e-19 | 61 |
leukocyte | 3.39e-18 | 136 |
myeloid lineage restricted progenitor cell | 3.77e-17 | 66 |
granulocyte monocyte progenitor cell | 7.38e-17 | 67 |
eosinophil | 1.33e-15 | 2 |
defensive cell | 5.47e-15 | 48 |
phagocyte | 5.47e-15 | 48 |
classical monocyte | 2.44e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.44e-14 | 42 |
hematopoietic stem cell | 5.49e-14 | 168 |
hematopoietic oligopotent progenitor cell | 3.46e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.46e-13 | 161 |
hematopoietic cell | 4.48e-13 | 177 |
immature conventional dendritic cell | 3.37e-11 | 5 |
common dendritic progenitor | 3.37e-11 | 5 |
nongranular leukocyte | 3.00e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.52e-08 | 120 |
conventional dendritic cell | 1.28e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 4.00e-36 | 15 |
haemolymphatic fluid | 4.00e-36 | 15 |
organism substance | 4.00e-36 | 15 |
hematopoietic system | 2.46e-32 | 98 |
blood island | 2.46e-32 | 98 |
hemolymphoid system | 5.53e-29 | 108 |
bone marrow | 1.40e-14 | 76 |
lateral plate mesoderm | 1.71e-13 | 203 |
bone element | 2.47e-13 | 82 |
skeletal element | 6.26e-12 | 90 |
immune system | 1.82e-11 | 93 |
skeletal system | 1.73e-10 | 100 |
mesoderm | 3.67e-07 | 315 |
mesoderm-derived structure | 3.67e-07 | 315 |
presumptive mesoderm | 3.67e-07 | 315 |