FFCP PHASE1:Hg19::chr12:10705960..10705966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000544591_5end | |association_with_transcript=0bp_to_ENST00000544591_5end | ||
|cluster_id=chr12:10705960..10705966,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_ENST00000544591_5end | |description=CAGE_peak_1_at_ENST00000544591_5end | ||
|id=chr12:10705960..10705966,+ | |id=chr12:10705960..10705966,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.68e-25!140;CL:0002087!8.09e-18!119;CL:0000037!1.32e-16!172;CL:0000566!1.32e-16!172;CL:0002031!1.57e-16!124;CL:0000625!6.01e-16!11;CL:0000988!4.24e-15!182;CL:0002032!1.78e-13!165;CL:0000837!1.78e-13!165;CL:0000791!1.24e-11!18;CL:0000789!1.24e-11!18;CL:0002420!1.24e-11!18;CL:0002419!1.24e-11!18;CL:0000790!1.24e-11!18;CL:0000766!8.54e-11!76;CL:0000838!4.33e-09!52;CL:0000542!8.92e-09!53;CL:0000051!8.92e-09!53;CL:0000557!1.70e-08!71;CL:0000084!1.96e-08!25;CL:0000827!1.96e-08!25;CL:0002057!2.50e-08!42;CL:0000860!3.73e-08!45;CL:0000839!4.32e-08!70;CL:0002009!6.98e-08!65;CL:0002194!1.02e-07!63;CL:0000576!1.02e-07!63;CL:0000040!1.02e-07!63;CL:0000559!1.02e-07!63 | |ontology_enrichment_celltype=CL:0000738!1.68e-25!140;CL:0002087!8.09e-18!119;CL:0000037!1.32e-16!172;CL:0000566!1.32e-16!172;CL:0002031!1.57e-16!124;CL:0000625!6.01e-16!11;CL:0000988!4.24e-15!182;CL:0002032!1.78e-13!165;CL:0000837!1.78e-13!165;CL:0000791!1.24e-11!18;CL:0000789!1.24e-11!18;CL:0002420!1.24e-11!18;CL:0002419!1.24e-11!18;CL:0000790!1.24e-11!18;CL:0000766!8.54e-11!76;CL:0000838!4.33e-09!52;CL:0000542!8.92e-09!53;CL:0000051!8.92e-09!53;CL:0000557!1.70e-08!71;CL:0000084!1.96e-08!25;CL:0000827!1.96e-08!25;CL:0002057!2.50e-08!42;CL:0000860!3.73e-08!45;CL:0000839!4.32e-08!70;CL:0002009!6.98e-08!65;CL:0002194!1.02e-07!63;CL:0000576!1.02e-07!63;CL:0000040!1.02e-07!63;CL:0000559!1.02e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.80e-32;11!CL:0000791;1.76e-22;18!CL:0000789;1.76e-22;18!CL:0002419;1.76e-22;18!CL:0000084;9.03e-18;25!CL:0000226;1.30e-09;3!CL:0000842;1.30e-09;3!CL:0000623;1.39e-09;3!CL:0000767;5.27e-09;3!CL:0000542;6.42e-07;53!CL:0002087;8.16e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.81e-32,11;CL:0000791,1.76e-22,18;CL:0000789,1.76e-22,18;CL:0002420,1.76e-22,18;CL:0002419,1.76e-22,18;CL:0000790,1.76e-22,18;CL:0000084,8.50e-18,25;CL:0000827,8.50e-18,25;CL:0000738,4.18e-16,136;CL:0002087,3.94e-13,115;CL:0000838,1.57e-12,52;CL:0000542,3.30e-12,53;CL:0000051,3.30e-12,53;CL:0000037,2.39e-11,168;CL:0000988,2.47e-10,177;CL:0000226,1.30e-09,3;CL:0000842,1.30e-09,3;CL:0000623,1.42e-09,3;CL:0000825,1.42e-09,3;CL:0002032,1.86e-09,161;CL:0000837,1.86e-09,161;CL:0002031,3.48e-09,120;CL:0000767,5.89e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.76e-22;18!CL:0000051;6.42e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.86e-23!115;UBERON:0002390!9.00e-17!102;UBERON:0003061!9.00e-17!102;UBERON:0002193!8.50e-16!112;UBERON:0000178!1.94e-13!15;UBERON:0000179!1.94e-13!15;UBERON:0000463!1.94e-13!15 | |ontology_enrichment_uberon=UBERON:0007023!4.86e-23!115;UBERON:0002390!9.00e-17!102;UBERON:0003061!9.00e-17!102;UBERON:0002193!8.50e-16!112;UBERON:0000178!1.94e-13!15;UBERON:0000179!1.94e-13!15;UBERON:0000463!1.94e-13!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.88e-25;15!UBERON:0000179;3.88e-25;15!UBERON:0000463;3.88e-25;15!UBERON:0002390;2.70e-17;32!UBERON:0002193;3.55e-12;42!UBERON:0004177;2.95e-09;5!UBERON:0005057;2.95e-09;5!UBERON:0002370;9.33e-07;2!UBERON:0005058;9.33e-07;2!UBERON:0009113;9.33e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.73e-25,15;UBERON:0000179,3.73e-25,15;UBERON:0000463,3.73e-25,15;UBERON:0002193,1.69e-12,108;UBERON:0007023,3.82e-12,114;UBERON:0002390,5.27e-12,98;UBERON:0003061,5.27e-12,98;UBERON:0004177,3.76e-10,7;UBERON:0005057,3.76e-10,7;UBERON:0002370,2.74e-07,4;UBERON:0005058,2.74e-07,4;UBERON:0009113,2.74e-07,4;UBERON:0003295,2.74e-07,4;UBERON:0005562,2.74e-07,4 | |||
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| ||
|short_description=p1@ENST00000544591 | |short_description=p1@ENST00000544591 | ||
}} | }} |
Latest revision as of 04:29, 24 July 2015
Short description: | p1@ENST00000544591 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000544591_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000544591_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.81e-32 | 11 |
mature alpha-beta T cell | 1.76e-22 | 18 |
alpha-beta T cell | 1.76e-22 | 18 |
immature T cell | 1.76e-22 | 18 |
mature T cell | 1.76e-22 | 18 |
immature alpha-beta T cell | 1.76e-22 | 18 |
T cell | 8.50e-18 | 25 |
pro-T cell | 8.50e-18 | 25 |
leukocyte | 4.18e-16 | 136 |
nongranular leukocyte | 3.94e-13 | 115 |
lymphoid lineage restricted progenitor cell | 1.57e-12 | 52 |
lymphocyte | 3.30e-12 | 53 |
common lymphoid progenitor | 3.30e-12 | 53 |
hematopoietic stem cell | 2.39e-11 | 168 |
hematopoietic cell | 2.47e-10 | 177 |
single nucleate cell | 1.30e-09 | 3 |
mononuclear cell | 1.30e-09 | 3 |
natural killer cell | 1.42e-09 | 3 |
pro-NK cell | 1.42e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.86e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 3.48e-09 | 120 |
basophil | 5.89e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.73e-25 | 15 |
haemolymphatic fluid | 3.73e-25 | 15 |
organism substance | 3.73e-25 | 15 |
hemolymphoid system | 1.69e-12 | 108 |
adult organism | 3.82e-12 | 114 |
hematopoietic system | 5.27e-12 | 98 |
blood island | 5.27e-12 | 98 |
hemopoietic organ | 3.76e-10 | 7 |
immune organ | 3.76e-10 | 7 |
thymus | 2.74e-07 | 4 |
hemolymphoid system gland | 2.74e-07 | 4 |
thymic region | 2.74e-07 | 4 |
pharyngeal gland | 2.74e-07 | 4 |
thymus primordium | 2.74e-07 | 4 |