FFCP PHASE1:Hg19::chr12:107676569..107676576,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:107676569..107676576,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_at_chr12:107676569..107676576,- | |description=CAGE_peak_at_chr12:107676569..107676576,- | ||
|id=chr12:107676569..107676576,- | |id=chr12:107676569..107676576,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.07e-17;2 | |||
|ontology_enrichment_disease=DOID:120!5.53e-08!27;DOID:193!2.41e-07!29;DOID:2394!7.89e-07!14 | |ontology_enrichment_disease=DOID:120!5.53e-08!27;DOID:193!2.41e-07!29;DOID:2394!7.89e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!1.47e-09!7;UBERON:0006222!1.47e-09!7;UBERON:0001905!1.95e-09!2;UBERON:0002757!1.95e-09!2;UBERON:0010134!1.95e-09!2;UBERON:0002784!1.95e-09!2;UBERON:0005408!1.95e-09!2;UBERON:0001899!1.95e-09!2 | |ontology_enrichment_uberon=UBERON:0001894!1.47e-09!7;UBERON:0006222!1.47e-09!7;UBERON:0001905!1.95e-09!2;UBERON:0002757!1.95e-09!2;UBERON:0010134!1.95e-09!2;UBERON:0002784!1.95e-09!2;UBERON:0005408!1.95e-09!2;UBERON:0001899!1.95e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;1.36e-44;3!UBERON:0005382;1.36e-44;3!UBERON:0001874;3.05e-34;1!UBERON:0000369;9.09e-34;4!UBERON:0002435;9.09e-34;4!UBERON:0000204;9.09e-34;4!UBERON:0009663;8.22e-20;7!UBERON:0001905;5.48e-18;2!UBERON:0002757;5.48e-18;2!UBERON:0010134;5.48e-18;2!UBERON:0005408;5.48e-18;2!UBERON:0001899;5.48e-18;2!UBERON:0001873;1.07e-17;2!UBERON:0002420;1.17e-15;9!UBERON:0000125;1.17e-15;9!UBERON:0007245;1.17e-15;9!UBERON:0002308;1.17e-15;9!UBERON:0010009;1.17e-15;9!UBERON:0010011;1.17e-15;9!UBERON:0000454;1.17e-15;9!UBERON:0003296;1.12e-09;4!UBERON:0010133;1.12e-09;4!UBERON:0002784;1.12e-09;4!UBERON:0002118;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.53e-44,3;UBERON:0005382,1.53e-44,3;UBERON:0001874,3.61e-34,1;UBERON:0000369,9.88e-34,4;UBERON:0002435,9.88e-34,4;UBERON:0000204,9.88e-34,4;UBERON:0010082,9.88e-34,4;UBERON:0009663,8.62e-20,7;UBERON:0001905,5.48e-18,2;UBERON:0002757,5.48e-18,2;UBERON:0010134,5.48e-18,2;UBERON:0005408,5.48e-18,2;UBERON:0001899,5.48e-18,2;UBERON:0001873,1.07e-17,2;UBERON:0010122,1.07e-17,2;UBERON:0002420,1.22e-15,9;UBERON:0000125,1.22e-15,9;UBERON:0007245,1.22e-15,9;UBERON:0002308,1.22e-15,9;UBERON:0010009,1.22e-15,9;UBERON:0010011,1.22e-15,9;UBERON:0000454,1.22e-15,9;UBERON:0003296,1.12e-09,4;UBERON:0010133,1.12e-09,4;UBERON:0002784,1.12e-09,4;UBERON:0002118,6.55e-08,5;UBERON:0002780,7.76e-08,41;UBERON:0001890,7.76e-08,41;UBERON:0003080,7.76e-08,41;UBERON:0006240,7.76e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.686520205190771,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0,1.61115835563733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2138624198618,0.672567444437648,0,0,0,0,0,0,0,0,0,0,2.19961825882403,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.82315897372553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.686520205190771,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0,1.61115835563733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2138624198618,0.672567444437648,0,0,0,0,0,0,0,0,0,0,2.19961825882403,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.82315897372553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:107676569..107676576,- | |short_description=p@chr12:107676569..107676576,- | ||
}} | }} |
Latest revision as of 04:31, 24 July 2015
Short description: | p@chr12:107676569..107676576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:107676569..107676576, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.53e-44 | 3 |
dorsal striatum | 1.53e-44 | 3 |
putamen | 3.61e-34 | 1 |
corpus striatum | 9.88e-34 | 4 |
striatum | 9.88e-34 | 4 |
ventral part of telencephalon | 9.88e-34 | 4 |
future corpus striatum | 9.88e-34 | 4 |
telencephalic nucleus | 8.62e-20 | 7 |
pineal body | 5.48e-18 | 2 |
regional part of epithalamus | 5.48e-18 | 2 |
secretory circumventricular organ | 5.48e-18 | 2 |
circumventricular organ | 5.48e-18 | 2 |
epithalamus | 5.48e-18 | 2 |
caudate nucleus | 1.07e-17 | 2 |
future caudate nucleus | 1.07e-17 | 2 |
basal ganglion | 1.22e-15 | 9 |
neural nucleus | 1.22e-15 | 9 |
nuclear complex of neuraxis | 1.22e-15 | 9 |
nucleus of brain | 1.22e-15 | 9 |
aggregate regional part of brain | 1.22e-15 | 9 |
collection of basal ganglia | 1.22e-15 | 9 |
cerebral subcortex | 1.22e-15 | 9 |
gland of diencephalon | 1.12e-09 | 4 |
neuroendocrine gland | 1.12e-09 | 4 |
regional part of diencephalon | 1.12e-09 | 4 |
right ovary | 6.55e-08 | 5 |
regional part of forebrain | 7.76e-08 | 41 |
forebrain | 7.76e-08 | 41 |
anterior neural tube | 7.76e-08 | 41 |
future forebrain | 7.76e-08 | 41 |