FFCP PHASE1:Hg19::chr12:113828268..113828337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113828268..113828337,+ | |||
|coexpression_cluster_id=C660 | |coexpression_cluster_id=C660 | ||
|description=CAGE_peak_at_chr12:113828268..113828337,+ | |description=CAGE_peak_at_chr12:113828268..113828337,+ | ||
|id=chr12:113828268..113828337,+ | |id=chr12:113828268..113828337,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.38e-11!57;UBERON:0005068!2.38e-11!57;UBERON:0006241!2.38e-11!57;UBERON:0007135!2.38e-11!57;UBERON:0000062!5.07e-11!511;UBERON:0000468!1.36e-09!659;UBERON:0002780!1.58e-09!41;UBERON:0001890!1.58e-09!41;UBERON:0006240!1.58e-09!41;UBERON:0003080!1.97e-09!42;UBERON:0003075!2.51e-09!86;UBERON:0007284!2.51e-09!86;UBERON:0002616!3.53e-09!59;UBERON:0000955!2.16e-08!69;UBERON:0006238!2.16e-08!69;UBERON:0002346!3.43e-08!90;UBERON:0001017!9.06e-08!82;UBERON:0002020!9.68e-08!34;UBERON:0003528!9.68e-08!34;UBERON:0005743!1.59e-07!86;UBERON:0000480!2.98e-07!626;UBERON:0000467!3.30e-07!625;UBERON:0000475!5.02e-07!365;UBERON:0003056!6.45e-07!61;UBERON:0001893!8.53e-07!34;UBERON:0002791!9.43e-07!33 | |ontology_enrichment_uberon=UBERON:0001049!2.38e-11!57;UBERON:0005068!2.38e-11!57;UBERON:0006241!2.38e-11!57;UBERON:0007135!2.38e-11!57;UBERON:0000062!5.07e-11!511;UBERON:0000468!1.36e-09!659;UBERON:0002780!1.58e-09!41;UBERON:0001890!1.58e-09!41;UBERON:0006240!1.58e-09!41;UBERON:0003080!1.97e-09!42;UBERON:0003075!2.51e-09!86;UBERON:0007284!2.51e-09!86;UBERON:0002616!3.53e-09!59;UBERON:0000955!2.16e-08!69;UBERON:0006238!2.16e-08!69;UBERON:0002346!3.43e-08!90;UBERON:0001017!9.06e-08!82;UBERON:0002020!9.68e-08!34;UBERON:0003528!9.68e-08!34;UBERON:0005743!1.59e-07!86;UBERON:0000480!2.98e-07!626;UBERON:0000467!3.30e-07!625;UBERON:0000475!5.02e-07!365;UBERON:0003056!6.45e-07!61;UBERON:0001893!8.53e-07!34;UBERON:0002791!9.43e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.40e-07;41!UBERON:0001890;2.40e-07;41!UBERON:0000073;6.05e-07;53!UBERON:0002616;6.05e-07;53!UBERON:0002619;6.85e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.12e-11,56;UBERON:0005068,2.12e-11,56;UBERON:0006241,2.12e-11,56;UBERON:0007135,2.12e-11,56;UBERON:0000073,7.92e-11,53;UBERON:0002616,7.92e-11,53;UBERON:0003075,4.55e-10,82;UBERON:0007284,4.55e-10,82;UBERON:0002780,1.25e-09,41;UBERON:0001890,1.25e-09,41;UBERON:0003080,1.25e-09,41;UBERON:0006240,1.25e-09,41;UBERON:0002346,8.59e-09,86;UBERON:0000955,3.48e-08,68;UBERON:0006238,3.48e-08,68;UBERON:0003528,8.29e-08,34;UBERON:0002020,8.29e-08,34;UBERON:0010371,1.06e-07,104;UBERON:0001017,1.15e-07,81;UBERON:0003056,3.23e-07,61;UBERON:0010314,5.06e-07,132;UBERON:0002791,7.22e-07,32;UBERON:0001893,7.56e-07,34;UBERON:0002619,8.99e-07,22 | |||
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| ||
|short_description=p@chr12:113828268..113828337,+ | |short_description=p@chr12:113828268..113828337,+ | ||
}} | }} |
Latest revision as of 05:14, 24 July 2015
Short description: | p@chr12:113828268..113828337, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113828268..113828337, + |
Coexpression cluster: | C660_Monocytederived_liposarcoma_Smooth_Synoviocyte_pituitary_Chondrocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.12e-11 | 56 |
neural rod | 2.12e-11 | 56 |
future spinal cord | 2.12e-11 | 56 |
neural keel | 2.12e-11 | 56 |
regional part of nervous system | 7.92e-11 | 53 |
regional part of brain | 7.92e-11 | 53 |
neural plate | 4.55e-10 | 82 |
presumptive neural plate | 4.55e-10 | 82 |
regional part of forebrain | 1.25e-09 | 41 |
forebrain | 1.25e-09 | 41 |
anterior neural tube | 1.25e-09 | 41 |
future forebrain | 1.25e-09 | 41 |
neurectoderm | 8.59e-09 | 86 |
brain | 3.48e-08 | 68 |
future brain | 3.48e-08 | 68 |
brain grey matter | 8.29e-08 | 34 |
gray matter | 8.29e-08 | 34 |
ecto-epithelium | 1.06e-07 | 104 |
central nervous system | 1.15e-07 | 81 |
pre-chordal neural plate | 3.23e-07 | 61 |
structure with developmental contribution from neural crest | 5.06e-07 | 132 |
regional part of telencephalon | 7.22e-07 | 32 |
telencephalon | 7.56e-07 | 34 |
regional part of cerebral cortex | 8.99e-07 | 22 |