FFCP PHASE1:Hg19::chr12:124873499..124873537,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124873499..124873537,+ | |||
|coexpression_cluster_id=C3249 | |||
|description=CAGE_peak_at_chr12:124873499..124873537,+ | |description=CAGE_peak_at_chr12:124873499..124873537,+ | ||
|id=chr12:124873499..124873537,+ | |id=chr12:124873499..124873537,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.03e-35!42;CL:0000860!3.42e-32!45;CL:0000766!3.08e-26!76;CL:0002194!2.40e-21!63;CL:0000576!2.40e-21!63;CL:0000040!2.40e-21!63;CL:0000559!2.40e-21!63;CL:0000839!3.92e-21!70;CL:0000557!1.34e-20!71;CL:0002009!3.34e-20!65;CL:0000763!5.59e-12!112;CL:0000049!5.59e-12!112;CL:0000738!4.26e-11!140;CL:0002393!8.18e-10!9;CL:0002397!8.18e-10!9;CL:0002087!1.06e-08!119;CL:0002031!1.25e-07!124 | |ontology_enrichment_celltype=CL:0002057!1.03e-35!42;CL:0000860!3.42e-32!45;CL:0000766!3.08e-26!76;CL:0002194!2.40e-21!63;CL:0000576!2.40e-21!63;CL:0000040!2.40e-21!63;CL:0000559!2.40e-21!63;CL:0000839!3.92e-21!70;CL:0000557!1.34e-20!71;CL:0002009!3.34e-20!65;CL:0000763!5.59e-12!112;CL:0000049!5.59e-12!112;CL:0000738!4.26e-11!140;CL:0002393!8.18e-10!9;CL:0002397!8.18e-10!9;CL:0002087!1.06e-08!119;CL:0002031!1.25e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-58;33!CL:0002057;3.40e-58;33!CL:0000576;1.90e-45;48!CL:0000473;1.60e-42;39!CL:0000234;1.60e-42;39!CL:0002393;1.61e-29;6!CL:0002397;1.61e-29;6!CL:0000766;2.92e-28;69!CL:0000763;1.35e-13;100!CL:0000771;1.91e-11;2!CL:0000738;8.59e-11;136!CL:0000094;1.98e-10;8!CL:0002087;1.76e-09;104!CL:0000081;1.36e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.83e-84,42;CL:0002057,7.83e-84,42;CL:0000473,1.41e-72,48;CL:0000234,1.41e-72,48;CL:0000766,1.56e-65,72;CL:0002194,8.20e-57,59;CL:0000576,8.20e-57,59;CL:0000040,8.20e-57,59;CL:0000559,8.20e-57,59;CL:0002009,8.87e-55,61;CL:0000839,4.69e-54,66;CL:0000557,3.63e-53,67;CL:0000763,1.38e-41,108;CL:0000049,1.38e-41,108;CL:0000738,5.36e-34,136;CL:0002087,1.21e-28,115;CL:0002031,4.66e-27,120;CL:0000037,3.34e-26,168;CL:0002032,1.11e-25,161;CL:0000837,1.11e-25,161;CL:0000988,1.63e-24,177;CL:0002393,1.38e-19,9;CL:0002397,1.38e-19,9;CL:0000771,1.56e-11,2;CL:0000134,3.20e-11,354;CL:0002320,7.42e-11,361;CL:0000094,1.72e-10,8;CL:0000219,2.09e-10,386;CL:0000048,1.43e-09,427;CL:0000723,2.50e-09,433;CL:0000034,5.13e-09,441;CL:0000081,1.23e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-59;42!CL:0000049;2.13e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.43e-17!102;UBERON:0003061!2.43e-17!102;UBERON:0002371!2.72e-17!80;UBERON:0001474!9.25e-17!86;UBERON:0003081!7.30e-16!216;UBERON:0002193!3.78e-14!112;UBERON:0002204!6.11e-13!167;UBERON:0004765!1.41e-12!101;UBERON:0001434!1.41e-12!101;UBERON:0002405!1.81e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!2.43e-17!102;UBERON:0003061!2.43e-17!102;UBERON:0002371!2.72e-17!80;UBERON:0001474!9.25e-17!86;UBERON:0003081!7.30e-16!216;UBERON:0002193!3.78e-14!112;UBERON:0002204!6.11e-13!167;UBERON:0004765!1.41e-12!101;UBERON:0001434!1.41e-12!101;UBERON:0002405!1.81e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-46,76;UBERON:0001474,2.14e-42,82;UBERON:0004765,4.20e-38,90;UBERON:0002390,2.52e-37,98;UBERON:0003061,2.52e-37,98;UBERON:0002405,1.11e-36,93;UBERON:0001434,1.08e-33,100;UBERON:0002193,2.70e-33,108;UBERON:0002204,8.38e-21,167;UBERON:0003081,9.82e-19,203;UBERON:0000926,2.19e-11,315;UBERON:0004120,2.19e-11,315;UBERON:0006603,2.19e-11,315;UBERON:0002384,2.66e-11,371 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0.383829398097213,2.32224184974114,0,0.90361775633475,0.369754010166788,0,0,0,3.87796785972314,2.20598892217156,2.60413044859022,0.447830948479849,0,0,1.01778767145695,1.51150377475524,2.91100873425379,1.62700325833979,0.822335776043652,1.85823822537062,0.575384784644301,0.512321413058201,1.89185783910868,1.03423704220986,2.5819387343353,1.35426486594342,3.76484679085209,1.36453075028923,1.12361742222542,1.83650335422542,0.320929027076094,1.91801137739712,1.64925650093358,1.99463657621632,1.27867425159808,0.870627715885752,0,0.622822248995575,0.75374599577023,1.5644487552606,0.65156653411535,0,0,1.58231193720442,2.11255286311942,2.76385589954557,1.88692780957538,3.14520167210186,2.55300717830561,1.76798145366788,0.855038231223746,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0.26591592103773,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,1.53316637465883,0,0.549605231791222,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.144119953416961,0.88369703398466,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,0.591092280605782,0,0.128343036279748,0,0,0,0.335032530668698,0,2.99602809578873,0,0.828831026872071,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.82707210449155,3.01999881146064,0.640365346820666,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.27470839445503,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0.6970372701606,0.616067160352178,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,2.35484592059769,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,3.23737241392301,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0.463044948647668,0.244736704506468,0.537266523244462,0,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0.383829398097213,2.32224184974114,0,0.90361775633475,0.369754010166788,0,0,0,3.87796785972314,2.20598892217156,2.60413044859022,0.447830948479849,0,0,1.01778767145695,1.51150377475524,2.91100873425379,1.62700325833979,0.822335776043652,1.85823822537062,0.575384784644301,0.512321413058201,1.89185783910868,1.03423704220986,2.5819387343353,1.35426486594342,3.76484679085209,1.36453075028923,1.12361742222542,1.83650335422542,0.320929027076094,1.91801137739712,1.64925650093358,1.99463657621632,1.27867425159808,0.870627715885752,0,0.622822248995575,0.75374599577023,1.5644487552606,0.65156653411535,0,0,1.58231193720442,2.11255286311942,2.76385589954557,1.88692780957538,3.14520167210186,2.55300717830561,1.76798145366788,0.855038231223746,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0.26591592103773,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,1.53316637465883,0,0.549605231791222,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.144119953416961,0.88369703398466,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,0.591092280605782,0,0.128343036279748,0,0,0,0.335032530668698,0,2.99602809578873,0,0.828831026872071,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.82707210449155,3.01999881146064,0.640365346820666,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.27470839445503,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0.6970372701606,0.616067160352178,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,2.35484592059769,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,3.23737241392301,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0.463044948647668,0.244736704506468,0.537266523244462,0,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:124873499..124873537,+ | |short_description=p@chr12:124873499..124873537,+ | ||
}} | }} |
Latest revision as of 06:23, 24 July 2015
Short description: | p@chr12:124873499..124873537, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124873499..124873537, + |
Coexpression cluster: | C3249_Eosinophils_CD14_Neutrophils_Peripheral_Basophils_CD19_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-46 | 76 |
bone element | 2.14e-42 | 82 |
skeletal element | 4.20e-38 | 90 |
hematopoietic system | 2.52e-37 | 98 |
blood island | 2.52e-37 | 98 |
immune system | 1.11e-36 | 93 |
skeletal system | 1.08e-33 | 100 |
hemolymphoid system | 2.70e-33 | 108 |
musculoskeletal system | 8.38e-21 | 167 |
lateral plate mesoderm | 9.82e-19 | 203 |
mesoderm | 2.19e-11 | 315 |
mesoderm-derived structure | 2.19e-11 | 315 |
presumptive mesoderm | 2.19e-11 | 315 |
connective tissue | 2.66e-11 | 371 |