FFCP PHASE1:Hg19::chr12:127754808..127754812,-: Difference between revisions
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|id=chr12:127754808..127754812,-
|short_description=p@chr12:127754808..127754812,-
|description=CAGE_peak_at_chr12:127754808..127754812,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:127754808..127754812,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:127754808..127754812,- | |||
|id=chr12:127754808..127754812,- | |||
|ontology_enrichment_celltype=CL:0002057!2.49e-47!42;CL:0000860!9.50e-44!45;CL:0002194!7.03e-29!63;CL:0000576!7.03e-29!63;CL:0000040!7.03e-29!63;CL:0000559!7.03e-29!63;CL:0002009!8.18e-28!65;CL:0000839!2.06e-25!70;CL:0000557!5.66e-25!71;CL:0000766!6.01e-23!76;CL:0002087!1.66e-16!119;CL:0000048!1.01e-13!430;CL:0000763!1.07e-13!112;CL:0000049!1.07e-13!112;CL:0000723!2.22e-13!436;CL:0000738!4.69e-13!140;CL:0000034!6.11e-13!444;CL:0002031!8.12e-12!124;CL:0000134!3.28e-11!358;CL:0000842!3.55e-11!3;CL:0002320!8.38e-11!365;CL:0000037!1.90e-09!172;CL:0000566!1.90e-09!172;CL:0000219!2.27e-09!390;CL:0000988!1.37e-08!182;CL:0000224!1.70e-08!4;CL:0002371!1.61e-07!591;CL:0002032!1.66e-07!165;CL:0000837!1.66e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-61;33!CL:0002057;1.05e-61;33!CL:0000473;1.19e-46;39!CL:0000234;1.19e-46;39!CL:0000576;8.64e-32;48!CL:0000766;9.96e-16;69!CL:0002087;8.51e-11;104!CL:0000569;5.33e-10;4!CL:0000763;1.73e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.78e-60,42;CL:0002057,6.78e-60,42;CL:0000473,4.31e-52,48;CL:0000234,4.31e-52,48;CL:0002194,3.68e-41,59;CL:0000576,3.68e-41,59;CL:0000040,3.68e-41,59;CL:0000559,3.68e-41,59;CL:0002009,9.50e-40,61;CL:0000839,1.38e-36,66;CL:0000557,5.19e-36,67;CL:0000766,2.30e-33,72;CL:0000763,1.85e-21,108;CL:0000049,1.85e-21,108;CL:0002087,5.35e-20,115;CL:0002031,4.66e-19,120;CL:0000738,1.65e-16,136;CL:0002032,1.57e-13,161;CL:0000837,1.57e-13,161;CL:0000037,7.48e-13,168;CL:0000988,4.64e-12,177;CL:0000569,5.71e-10,4;CL:0000011,5.71e-10,4;CL:0000134,3.51e-08,354;CL:0002320,5.87e-08,361;CL:0000219,3.60e-07,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.22e-40;42!CL:0000011;5.33e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!5.58e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-23!80;UBERON:0002390!4.02e-22!102;UBERON:0003061!4.02e-22!102;UBERON:0001474!1.80e-21!86;UBERON:0002193!1.54e-19!112;UBERON:0004765!2.24e-17!101;UBERON:0001434!2.24e-17!101;UBERON:0002405!2.44e-17!115;UBERON:0002204!1.62e-16!167;UBERON:0003081!3.33e-15!216;UBERON:0002384!3.01e-10!375;UBERON:0000926!3.35e-08!448;UBERON:0004120!3.35e-08!448;UBERON:0006603!3.35e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-31,76;UBERON:0001474,5.03e-29,82;UBERON:0004765,3.08e-26,90;UBERON:0002405,2.58e-25,93;UBERON:0002390,6.70e-24,98;UBERON:0003061,6.70e-24,98;UBERON:0001434,2.26e-23,100;UBERON:0002193,1.85e-21,108;UBERON:0003081,1.29e-16,203;UBERON:0002204,1.06e-14,167;UBERON:0000926,1.37e-09,315;UBERON:0004120,1.37e-09,315;UBERON:0006603,1.37e-09,315;UBERON:0002384,1.18e-07,371 | |||
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| ||
|short_description=p@chr12:127754808..127754812,- | |||
}} | }} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:127754808..127754812, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127754808..127754812, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.78e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.78e-60 | 42 |
defensive cell | 4.31e-52 | 48 |
phagocyte | 4.31e-52 | 48 |
monopoietic cell | 3.68e-41 | 59 |
monocyte | 3.68e-41 | 59 |
monoblast | 3.68e-41 | 59 |
promonocyte | 3.68e-41 | 59 |
macrophage dendritic cell progenitor | 9.50e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.38e-36 | 66 |
granulocyte monocyte progenitor cell | 5.19e-36 | 67 |
myeloid leukocyte | 2.30e-33 | 72 |
myeloid cell | 1.85e-21 | 108 |
common myeloid progenitor | 1.85e-21 | 108 |
nongranular leukocyte | 5.35e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 4.66e-19 | 120 |
leukocyte | 1.65e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.57e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-13 | 161 |
hematopoietic stem cell | 7.48e-13 | 168 |
hematopoietic cell | 4.64e-12 | 177 |
cardiac mesenchymal cell | 5.71e-10 | 4 |
migratory trunk neural crest cell | 5.71e-10 | 4 |
mesenchymal cell | 3.51e-08 | 354 |
connective tissue cell | 5.87e-08 | 361 |
motile cell | 3.60e-07 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-31 | 76 |
bone element | 5.03e-29 | 82 |
skeletal element | 3.08e-26 | 90 |
immune system | 2.58e-25 | 93 |
hematopoietic system | 6.70e-24 | 98 |
blood island | 6.70e-24 | 98 |
skeletal system | 2.26e-23 | 100 |
hemolymphoid system | 1.85e-21 | 108 |
lateral plate mesoderm | 1.29e-16 | 203 |
musculoskeletal system | 1.06e-14 | 167 |
mesoderm | 1.37e-09 | 315 |
mesoderm-derived structure | 1.37e-09 | 315 |
presumptive mesoderm | 1.37e-09 | 315 |
connective tissue | 1.18e-07 | 371 |