FFCP PHASE1:Hg19::chr12:131478468..131478480,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000536673_5end | |association_with_transcript=31bp_to_ENST00000536673_5end | ||
|cluster_id=chr12:131478468..131478480,- | |||
|description=CAGE_peak_1_at_ENST00000536673_5end | |description=CAGE_peak_1_at_ENST00000536673_5end | ||
|id=chr12:131478468..131478480,- | |id=chr12:131478468..131478480,- | ||
|ontology_enrichment_celltype=CL:0002553;4.72e-17;1!CL:0000082;3.37e-13;19!CL:0000054;7.49e-09;2!CL:0000137;7.49e-09;2!CL:0000092;7.49e-09;2 | |ontology_enrichment_celltype=CL:0002553!2.09e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0002553;4.72e-17;1!CL:0000082;3.37e-13;19!CL:0000054;7.49e-09;2!CL:0000137;7.49e-09;2!CL:0000092;7.49e-09;2 | ||
|ontology_enrichment_disease=DOID:2355;7.57e-17;1!DOID:1324;1.26e-16;15!DOID:0060085;2.25e-16;1!DOID:3165;2.25e-16;1!DOID:0060121;2.25e-16;1!DOID:2438;2.25e-16;1!DOID:4418;2.25e-16;1!DOID:0050615;1.31e-15;16!DOID:1749;1.64e-10;14!DOID:4074;3.86e-09;2!DOID:4905;3.86e-09;2!DOID:3498;3.86e-09;2!DOID:74;4.34e-09;2!DOID:200;7.49e-09;2!DOID:4305;7.49e-09;2!DOID:0060058;4.13e-07;10 | |ontology_enrichment_celltype_v019_2=CL:0002553,4.72e-17,1;CL:0000082,3.37e-13,19;CL:0000054,8.09e-09,2;CL:0000137,8.09e-09,2;CL:0000092,8.09e-09,2 | ||
|ontology_enrichment_uberon=UBERON:0004802;3.37e-13;19!UBERON:0000115;3.37e-13;19!UBERON:0002048;1.93e-11;22!UBERON:0004807;1.93e-11;22!UBERON:0000117;1.93e-11;22!UBERON:0000171;1.93e-11;22!UBERON:0000170;1.93e-11;22 | |ontology_enrichment_development_v019=UBERON:0008947;9.59e-09;29!UBERON:0001041;1.84e-08;30 | ||
|ontology_enrichment_disease=DOID:162!1.05e-08!235;DOID:14566!2.01e-08!239;DOID:305!1.34e-07!106;DOID:2355!2.50e-07!1;DOID:0050686!3.97e-07!137;DOID:0060085!4.01e-07!1;DOID:3165!4.01e-07!1;DOID:0060121!4.01e-07!1;DOID:2438!4.01e-07!1;DOID:4418!4.01e-07!1;DOID:0050687!9.05e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2355;7.57e-17;1!DOID:1324;1.26e-16;15!DOID:0060085;2.25e-16;1!DOID:3165;2.25e-16;1!DOID:0060121;2.25e-16;1!DOID:2438;2.25e-16;1!DOID:4418;2.25e-16;1!DOID:0050615;1.31e-15;16!DOID:1749;1.64e-10;14!DOID:4074;3.86e-09;2!DOID:4905;3.86e-09;2!DOID:3498;3.86e-09;2!DOID:74;4.34e-09;2!DOID:200;7.49e-09;2!DOID:4305;7.49e-09;2!DOID:0060058;4.13e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.57e-17,1;DOID:1324,1.26e-16,15;DOID:0060085,2.63e-16,1;DOID:3165,2.63e-16,1;DOID:0060121,2.63e-16,1;DOID:2438,2.63e-16,1;DOID:4418,2.63e-16,1;DOID:0050615,1.31e-15,16;DOID:1749,1.67e-10,14;DOID:4074,3.71e-09,2;DOID:4905,3.71e-09,2;DOID:3498,3.71e-09,2;DOID:74,4.34e-09,2;DOID:200,8.09e-09,2;DOID:4305,8.09e-09,2;DOID:305,1.26e-08,106;DOID:162,3.14e-08,235;DOID:0050686,3.63e-08,137;DOID:14566,4.93e-08,239;DOID:0060058,4.13e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.30e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;3.37e-13;19!UBERON:0000115;3.37e-13;19!UBERON:0002048;1.93e-11;22!UBERON:0004807;1.93e-11;22!UBERON:0000117;1.93e-11;22!UBERON:0000171;1.93e-11;22!UBERON:0000170;1.93e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,3.37e-13,19;UBERON:0000115,3.37e-13,19;UBERON:0002048,1.93e-11,22;UBERON:0000117,1.93e-11,22;UBERON:0000171,1.93e-11,22;UBERON:0000170,1.93e-11,22;UBERON:0005597,1.93e-11,22;UBERON:0000118,1.93e-11,22;UBERON:0004807,4.77e-09,28;UBERON:0005178,1.71e-07,34;UBERON:0002224,1.71e-07,34;UBERON:0005181,2.77e-07,35;UBERON:0005153,6.67e-07,37 | |||
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|short_description=p1@ENST00000536673 | |short_description=p1@ENST00000536673 | ||
}} | }} |
Latest revision as of 06:47, 24 July 2015
Short description: | p1@ENST00000536673 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000536673_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000536673_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.72e-17 | 1 |
epithelial cell of lung | 3.37e-13 | 19 |
bone matrix secreting cell | 8.09e-09 | 2 |
osteocyte | 8.09e-09 | 2 |
osteoclast | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 3.37e-13 | 19 |
lung epithelium | 3.37e-13 | 19 |
lung | 1.93e-11 | 22 |
respiratory tube | 1.93e-11 | 22 |
respiration organ | 1.93e-11 | 22 |
pair of lungs | 1.93e-11 | 22 |
lung primordium | 1.93e-11 | 22 |
lung bud | 1.93e-11 | 22 |
respiratory system epithelium | 4.77e-09 | 28 |
thoracic cavity element | 1.71e-07 | 34 |
thoracic cavity | 1.71e-07 | 34 |
thoracic segment organ | 2.77e-07 | 35 |
epithelial bud | 6.67e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.57e-17 | 1 |
lung cancer | 1.26e-16 | 15 |
organ system benign neoplasm | 2.63e-16 | 1 |
skin benign neoplasm | 2.63e-16 | 1 |
integumentary system benign neoplasm | 2.63e-16 | 1 |
dermis tumor | 2.63e-16 | 1 |
cutaneous fibrous histiocytoma | 2.63e-16 | 1 |
respiratory system cancer | 1.31e-15 | 16 |
squamous cell carcinoma | 1.67e-10 | 14 |
pancreas adenocarcinoma | 3.71e-09 | 2 |
pancreatic carcinoma | 3.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 3.71e-09 | 2 |
hematopoietic system disease | 4.34e-09 | 2 |
giant cell tumor | 8.09e-09 | 2 |
bone giant cell tumor | 8.09e-09 | 2 |
carcinoma | 1.26e-08 | 106 |
cancer | 3.14e-08 | 235 |
organ system cancer | 3.63e-08 | 137 |
disease of cellular proliferation | 4.93e-08 | 239 |
lymphoma | 4.13e-07 | 10 |