FFCP PHASE1:Hg19::chr12:28344315..28344329,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:28344315..28344329,- | |||
|description=CAGE_peak_at_chr12:28344315..28344329,- | |||
|id=chr12:28344315..28344329,- | |||
|ontology_enrichment_celltype=CL:0000738!1.08e-16!140;CL:0000037!2.90e-13!172;CL:0000566!2.90e-13!172;CL:0002057!3.07e-13!42;CL:0002031!7.81e-13!124;CL:0000134!9.78e-13!358;CL:0002032!4.07e-12!165;CL:0000837!4.07e-12!165;CL:0002320!4.42e-12!365;CL:0000860!5.97e-12!45;CL:0000988!9.04e-12!182;CL:0000557!9.96e-12!71;CL:0000766!1.56e-11!76;CL:0000219!2.89e-10!390;CL:0002087!3.94e-10!119;CL:0000763!4.87e-10!112;CL:0000049!4.87e-10!112;CL:0000048!5.54e-10!430;CL:0000839!7.00e-10!70;CL:0000723!1.52e-09!436;CL:0002009!4.91e-09!65;CL:0000034!5.58e-09!444;CL:0000453!4.25e-08!5;CL:0002194!1.37e-07!63;CL:0000576!1.37e-07!63;CL:0000040!1.37e-07!63;CL:0000559!1.37e-07!63;CL:0000623!5.41e-07!3;CL:0000825!5.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.64e-31;3!CL:0000791;6.48e-14;18!CL:0000789;6.48e-14;18!CL:0002419;6.48e-14;18!CL:0000084;5.48e-10;25!CL:0000097;7.25e-09;5!CL:0000625;8.42e-09;11!CL:0000624;1.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.03e-31,3;CL:0000825,9.03e-31,3;CL:0002031,8.23e-19,120;CL:0000738,2.48e-16,136;CL:0000791,6.67e-14,18;CL:0000789,6.67e-14,18;CL:0002420,6.67e-14,18;CL:0002419,6.67e-14,18;CL:0000790,6.67e-14,18;CL:0002032,1.96e-13,161;CL:0000837,1.96e-13,161;CL:0000037,8.93e-13,168;CL:0002087,1.25e-12,115;CL:0000988,5.28e-12,177;CL:0000838,1.95e-11,52;CL:0000542,3.35e-11,53;CL:0000051,3.35e-11,53;CL:0000084,5.59e-10,25;CL:0000827,5.59e-10,25;CL:0000097,6.98e-09,5;CL:0002028,6.98e-09,5;CL:0000625,8.65e-09,11;CL:0000557,1.79e-08,67;CL:0000624,1.09e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.48e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-13!80;UBERON:0002384!2.16e-12!375;UBERON:0001474!5.51e-12!86;UBERON:0002390!2.67e-10!102;UBERON:0003061!2.67e-10!102;UBERON:0004765!6.10e-09!101;UBERON:0001434!6.10e-09!101;UBERON:0002193!1.35e-08!112;UBERON:0002405!6.86e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.96e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.63e-11,1;UBERON:0002371,2.61e-09,76;UBERON:0001474,1.50e-08,82;UBERON:0004765,1.08e-07,90;UBERON:0002405,2.09e-07,93;UBERON:0002384,5.41e-07,371;UBERON:0002390,5.69e-07,98;UBERON:0003061,5.69e-07,98;UBERON:0001434,8.27e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,2.17010870715852,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0,0,0,0,1.72372840368309,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.962787081228281,1.27867425159808,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17903228824749,3.49522548299166,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0.821127996921047,1.00803371612366,3.4767225451856,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.161646056818812,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.86595303986695,1.00883967391873,0.6312121671319,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,2.1673383622212,3.23441362289276,1.02674429023799,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.465788870628778,0,0,0,0.300515217994437,0,0.813741466409323,0.363697318405119,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,1.24082554265728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:28344315..28344329,- | |||
}} |
Latest revision as of 07:57, 24 July 2015
Short description: | p@chr12:28344315..28344329, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28344315..28344329, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.03e-31 | 3 |
pro-NK cell | 9.03e-31 | 3 |
hematopoietic lineage restricted progenitor cell | 8.23e-19 | 120 |
leukocyte | 2.48e-16 | 136 |
mature alpha-beta T cell | 6.67e-14 | 18 |
alpha-beta T cell | 6.67e-14 | 18 |
immature T cell | 6.67e-14 | 18 |
mature T cell | 6.67e-14 | 18 |
immature alpha-beta T cell | 6.67e-14 | 18 |
hematopoietic oligopotent progenitor cell | 1.96e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-13 | 161 |
hematopoietic stem cell | 8.93e-13 | 168 |
nongranular leukocyte | 1.25e-12 | 115 |
hematopoietic cell | 5.28e-12 | 177 |
lymphoid lineage restricted progenitor cell | 1.95e-11 | 52 |
lymphocyte | 3.35e-11 | 53 |
common lymphoid progenitor | 3.35e-11 | 53 |
T cell | 5.59e-10 | 25 |
pro-T cell | 5.59e-10 | 25 |
mast cell | 6.98e-09 | 5 |
basophil mast progenitor cell | 6.98e-09 | 5 |
CD8-positive, alpha-beta T cell | 8.65e-09 | 11 |
granulocyte monocyte progenitor cell | 1.79e-08 | 67 |
CD4-positive, alpha-beta T cell | 1.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.63e-11 | 1 |
bone marrow | 2.61e-09 | 76 |
bone element | 1.50e-08 | 82 |
skeletal element | 1.08e-07 | 90 |
immune system | 2.09e-07 | 93 |
connective tissue | 5.41e-07 | 371 |
hematopoietic system | 5.69e-07 | 98 |
blood island | 5.69e-07 | 98 |
skeletal system | 8.27e-07 | 100 |