FFCP PHASE1:Hg19::chr12:4381188..4381194,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:4381188..4381194,- | |||
|description=CAGE_peak_at_chr12:4381188..4381194,- | |||
|id=chr12:4381188..4381194,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.65e-10;1!UBERON:0005425;4.65e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.00e-22!57;UBERON:0005068!1.00e-22!57;UBERON:0006241!1.00e-22!57;UBERON:0007135!1.00e-22!57;UBERON:0007023!2.70e-21!115;UBERON:0002020!9.39e-19!34;UBERON:0003528!9.39e-19!34;UBERON:0002780!3.28e-18!41;UBERON:0001890!3.28e-18!41;UBERON:0006240!3.28e-18!41;UBERON:0001893!3.70e-18!34;UBERON:0002791!1.47e-17!33;UBERON:0001869!1.67e-17!32;UBERON:0003080!1.70e-17!42;UBERON:0002616!2.90e-17!59;UBERON:0003075!6.28e-17!86;UBERON:0007284!6.28e-17!86;UBERON:0002346!7.95e-17!90;UBERON:0000955!3.67e-15!69;UBERON:0006238!3.67e-15!69;UBERON:0001017!7.11e-15!82;UBERON:0005743!2.62e-14!86;UBERON:0000073!3.24e-13!94;UBERON:0001016!3.24e-13!94;UBERON:0003056!1.04e-12!61;UBERON:0000956!7.49e-12!25;UBERON:0000203!7.49e-12!25;UBERON:0002619!4.11e-10!22;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0002420!2.89e-09!9;UBERON:0007245!2.89e-09!9;UBERON:0010009!2.89e-09!9;UBERON:0010011!2.89e-09!9;UBERON:0000454!2.89e-09!9;UBERON:0000033!3.52e-09!123;UBERON:0002308!7.26e-09!9;UBERON:0000125!7.26e-09!9;UBERON:0001950!1.22e-08!20;UBERON:0000924!6.05e-08!173;UBERON:0006601!6.05e-08!173;UBERON:0004121!8.29e-08!169;UBERON:0009663!2.53e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;2.76e-12;3!UBERON:0005382;2.76e-12;3!UBERON:0000941;4.65e-10;1!UBERON:0001785;4.65e-10;1!UBERON:0002464;4.65e-10;1!UBERON:0004904;4.65e-10;1!UBERON:0001021;4.65e-10;1!UBERON:0001874;1.25e-09;1!UBERON:0001000;1.25e-09;1!UBERON:0005352;1.25e-09;1!UBERON:0000369;1.95e-09;4!UBERON:0002435;1.95e-09;4!UBERON:0000204;1.95e-09;4!UBERON:0000125;5.58e-09;9!UBERON:0002308;5.58e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.57e-12,3;UBERON:0005382,3.57e-12,3;UBERON:0000941,4.09e-10,1;UBERON:0001785,4.09e-10,1;UBERON:0002464,4.09e-10,1;UBERON:0004904,4.09e-10,1;UBERON:0001021,4.09e-10,1;UBERON:0003902,4.09e-10,1;UBERON:0005425,4.09e-10,1;UBERON:0001000,1.48e-09,1;UBERON:0005352,1.48e-09,1;UBERON:0001874,1.91e-09,1;UBERON:0000369,2.36e-09,4;UBERON:0002435,2.36e-09,4;UBERON:0000204,2.36e-09,4;UBERON:0010082,2.36e-09,4;UBERON:0000125,7.65e-09,9;UBERON:0002308,7.65e-09,9;UBERON:0007023,1.54e-08,114 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,0.376627918784408,0.0764134057479513,0.164201178899891,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.75374599577023,1.0429658368404,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,1.17903228824749,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0.722878304769133,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0.117434498643765,0,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.515281080091258,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.431255149719035,0.513372145118994,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.184161977871793,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0,0.178064071293475,0,0,0.638063562472921,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,1.19548792950642,0.276283915531148,0,0,0.123084805461069,0,0,0,1.02314474045374,0.0986434056369336,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0.568967241427498,0,0,0,0,0.173624994933292,2.65722415744152,0.723578631752448,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0.593042257361244,0.247127877893006,0.208843899010911,0.134802265961354,0,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,1.18375320854817,0,0.61214552326098,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0.274083849293502,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.0846733320657845,3.18091875923721,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,1.0342636508924,0.26446520348538,0,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.250381861413,1.14681839138014,0.443716206147409,0.620964029413834,0.276697269872462,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0,0,0,0,0,0.642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0.645902582527404,2.85538840518309,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.507326481551255,0.546974809018219,0,0.992422356778588,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.0887023701626388,0.230467975111559,0,0.40781839786099,0.394636641377094,0,0,0.39246546425257,1.09980912941201,0.560544326627578,0,0,0,0.357382720883282,0,0,0.1738582723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| |||
|short_description=p@chr12:4381188..4381194,- | |||
}} |
Latest revision as of 08:29, 24 July 2015
Short description: | p@chr12:4381188..4381194, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4381188..4381194, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.57e-12 | 3 |
dorsal striatum | 3.57e-12 | 3 |
cranial nerve II | 4.09e-10 | 1 |
cranial nerve | 4.09e-10 | 1 |
nerve trunk | 4.09e-10 | 1 |
nerve connecting eye with brain | 4.09e-10 | 1 |
nerve | 4.09e-10 | 1 |
retinal neural layer | 4.09e-10 | 1 |
presumptive neural retina | 4.09e-10 | 1 |
vas deferens | 1.48e-09 | 1 |
spermatic cord | 1.48e-09 | 1 |
putamen | 1.91e-09 | 1 |
corpus striatum | 2.36e-09 | 4 |
striatum | 2.36e-09 | 4 |
ventral part of telencephalon | 2.36e-09 | 4 |
future corpus striatum | 2.36e-09 | 4 |
neural nucleus | 7.65e-09 | 9 |
nucleus of brain | 7.65e-09 | 9 |
adult organism | 1.54e-08 | 114 |