FFCP PHASE1:Hg19::chr12:53686472..53686482,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:53686472..53686482,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr12:53686472..53686482,+ | |||
|id=chr12:53686472..53686482,+ | |||
|ontology_enrichment_celltype=CL:0002553!2.30e-21!1;CL:0000242!2.73e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.10e-50;1!CL:0000082;1.59e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.99e-50,1;CL:0000082,1.63e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.56e-08;29!UBERON:0001041;1.11e-07;30 | |||
|ontology_enrichment_disease=DOID:4960!5.16e-21!1;DOID:0070004!5.16e-21!1;DOID:225!7.72e-21!1;DOID:74!4.09e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.66e-14;15!DOID:5409;8.82e-14;4!DOID:0050615;1.77e-13;16!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.75e-14,15;DOID:5409,8.82e-14,4;DOID:0050615,1.83e-13,16;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000341!3.02e-11!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.59e-11;19!UBERON:0000115;1.59e-11;19!UBERON:0002048;4.23e-10;22!UBERON:0004807;4.23e-10;22!UBERON:0000117;4.23e-10;22!UBERON:0000171;4.23e-10;22!UBERON:0000170;4.23e-10;22!UBERON:0001871;2.35e-08;6!UBERON:0000072;3.41e-07;37!UBERON:0005181;3.42e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.63e-11,19;UBERON:0000115,1.63e-11,19;UBERON:0002048,4.33e-10,22;UBERON:0000117,4.33e-10,22;UBERON:0000171,4.33e-10,22;UBERON:0000170,4.33e-10,22;UBERON:0005597,4.33e-10,22;UBERON:0000118,4.33e-10,22;UBERON:0001871,2.35e-08,6;UBERON:0004807,3.78e-08,28;UBERON:0005178,6.95e-07,34;UBERON:0002224,6.95e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2654733625338,0,0,3.76253837089218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:53686472..53686482,+ | |||
}} |
Latest revision as of 09:49, 24 July 2015
Short description: | p@chr12:53686472..53686482, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53686472..53686482, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.99e-50 | 1 |
epithelial cell of lung | 1.63e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.63e-11 | 19 |
lung epithelium | 1.63e-11 | 19 |
lung | 4.33e-10 | 22 |
respiratory tube | 4.33e-10 | 22 |
respiration organ | 4.33e-10 | 22 |
pair of lungs | 4.33e-10 | 22 |
lung primordium | 4.33e-10 | 22 |
lung bud | 4.33e-10 | 22 |
temporal lobe | 2.35e-08 | 6 |
respiratory system epithelium | 3.78e-08 | 28 |
thoracic cavity element | 6.95e-07 | 34 |
thoracic cavity | 6.95e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.75e-14 | 15 |
lung small cell carcinoma | 8.82e-14 | 4 |
respiratory system cancer | 1.83e-13 | 16 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |