FFCP PHASE1:Hg19::chr12:58142997..58143015,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:58142997..58143015,- | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_at_chr12:58142997..58143015,- | |description=CAGE_peak_at_chr12:58142997..58143015,- | ||
|id=chr12:58142997..58143015,- | |id=chr12:58142997..58143015,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;5.92e-26;1!CL:0002188;9.92e-21;5!CL:1000746;4.07e-15;7!CL:1000612;4.07e-15;7!CL:0002681;3.13e-09;12!CL:0002584;3.13e-09;12!CL:1000449;1.44e-07;15!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.93e-26,1;CL:0002188,1.21e-20,5;CL:1000746,4.69e-15,7;CL:1000612,4.69e-15,7;CL:0002681,3.41e-09,12;CL:0002584,3.41e-09,12;CL:1000449,1.54e-07,15;CL:1000497,9.37e-07,17;CL:0002518,9.37e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.41e-10!239;DOID:162!2.91e-09!235;DOID:0050687!1.53e-08!143 | |ontology_enrichment_disease=DOID:14566!1.41e-10!239;DOID:162!2.91e-09!235;DOID:0050687!1.53e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;4.07e-15;7!UBERON:0001229;4.07e-15;7!UBERON:0000007;1.07e-13;2!UBERON:0005406;1.07e-13;2!UBERON:0001225;3.13e-09;12!UBERON:0008987;3.13e-09;12!UBERON:0001851;1.44e-07;15!UBERON:0006555;1.44e-07;15!UBERON:0000353;1.44e-07;15!UBERON:0004819;1.44e-07;15!UBERON:0001285;1.44e-07;15!UBERON:0007684;1.44e-07;15!UBERON:0003296;1.69e-07;4!UBERON:0010133;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,4.69e-15,7;UBERON:0000074,4.69e-15,7;UBERON:0001229,4.69e-15,7;UBERON:0001230,4.69e-15,7;UBERON:0003220,4.69e-15,7;UBERON:0005749,4.69e-15,7;UBERON:0004199,4.69e-15,7;UBERON:0004209,4.69e-15,7;UBERON:0004198,4.69e-15,7;UBERON:0000007,7.30e-14,2;UBERON:0005406,1.07e-13,2;UBERON:0005103,2.65e-13,8;UBERON:0000083,2.65e-13,8;UBERON:0009201,2.65e-13,8;UBERON:0006553,2.65e-13,8;UBERON:0003074,2.65e-13,8;UBERON:0003060,2.65e-13,8;UBERON:0000080,6.16e-12,9;UBERON:0002120,6.16e-12,9;UBERON:0004875,6.16e-12,9;UBERON:0005721,6.16e-12,9;UBERON:0005754,6.16e-12,9;UBERON:0007297,6.16e-12,9;UBERON:0004876,6.06e-10,11;UBERON:0001225,3.41e-09,12;UBERON:0008987,3.41e-09,12;UBERON:0003887,3.41e-09,12;UBERON:0003296,1.40e-07,4;UBERON:0010133,1.40e-07,4;UBERON:0001851,1.54e-07,15;UBERON:0004211,1.54e-07,15;UBERON:0009773,1.54e-07,15;UBERON:0000353,1.54e-07,15;UBERON:0001231,1.54e-07,15;UBERON:0001285,1.54e-07,15;UBERON:0007684,1.54e-07,15;UBERON:0004208,1.54e-07,15;UBERON:0006555,4.02e-07,16;UBERON:0004819,4.02e-07,16 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0,0,0,0.383829398097213,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0.925971025153221,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,1.48418066444991,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0.318852545457645,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0.46112780877612,0.179515288819544,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.300646838828985,0,0,0,0.627865836814451,0,0,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0.290268993867255,0,0.164230914106418,0,0.0882561266915003,0,0.274083849293502,0.397429223405979,0,0.586654148204409,0,0,0.19980960958213,0.432271251462318,0,0.171594997861965,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,1.16495949527454,0,0.164831716762333,0.13480708770837,0,0,0,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0.653174720218818,0,0.082092520749339,8.34901306748566,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0.38582807654183,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0.106691729694141,0.172214979660816,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0.786329709279482,0.54604819096007,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0.40341013740704,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,1.82089681270989,0,0,0,0,0,0.0657727735628491,0.236387681767936,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0.935757853848423,0,0.118920090777569,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0.940634592723046,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0.917458566809082,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0.252332849670158,0.109265571963696,0.380095503034311,0.203977659483963,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0,0,0,0.383829398097213,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0.925971025153221,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,1.48418066444991,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0.318852545457645,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0.46112780877612,0.179515288819544,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.300646838828985,0,0,0,0.627865836814451,0,0,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0.290268993867255,0,0.164230914106418,0,0.0882561266915003,0,0.274083849293502,0.397429223405979,0,0.586654148204409,0,0,0.19980960958213,0.432271251462318,0,0.171594997861965,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,1.16495949527454,0,0.164831716762333,0.13480708770837,0,0,0,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0.653174720218818,0,0.082092520749339,8.34901306748566,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0.38582807654183,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0.106691729694141,0.172214979660816,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0.786329709279482,0.54604819096007,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0.40341013740704,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,1.82089681270989,0,0,0,0,0,0.0657727735628491,0.236387681767936,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0.935757853848423,0,0.118920090777569,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0.940634592723046,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0.917458566809082,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0.252332849670158,0.109265571963696,0.380095503034311,0.203977659483963,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:58142997..58143015,- | |short_description=p@chr12:58142997..58143015,- | ||
}} | }} |
Latest revision as of 10:57, 24 July 2015
Short description: | p@chr12:58142997..58143015, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:58142997..58143015, - |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.93e-26 | 1 |
glomerular endothelial cell | 1.21e-20 | 5 |
glomerular cell | 4.69e-15 | 7 |
kidney corpuscule cell | 4.69e-15 | 7 |
kidney cortical cell | 3.41e-09 | 12 |
renal cortical epithelial cell | 3.41e-09 | 12 |
epithelial cell of nephron | 1.54e-07 | 15 |
kidney cell | 9.37e-07 | 17 |
kidney epithelial cell | 9.37e-07 | 17 |