FFCP PHASE1:Hg19::chr12:6890042..6890078,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6890042..6890078,+ | |||
|coexpression_cluster_id=C99 | |coexpression_cluster_id=C99 | ||
|description=CAGE_peak_at_chr12:6890042..6890078,+ | |description=CAGE_peak_at_chr12:6890042..6890078,+ | ||
|id=chr12:6890042..6890078,+ | |id=chr12:6890042..6890078,+ | ||
|ontology_enrichment_celltype=CL:0000080!5.40e-28!6;CL:0000838!9.94e-09!52;CL:0000542!1.45e-08!53;CL:0000051!1.45e-08!53;CL:0000084!3.72e-07!25;CL:0000827!3.72e-07!25 | |ontology_enrichment_celltype=CL:0000080!5.40e-28!6;CL:0000838!9.94e-09!52;CL:0000542!1.45e-08!53;CL:0000051!1.45e-08!53;CL:0000084!3.72e-07!25;CL:0000827!3.72e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.35e-07,25;CL:0000827,2.35e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.88e-19!1;DOID:0060061!1.88e-19!1;DOID:8691!1.88e-19!1 | |ontology_enrichment_disease=DOID:0060060!1.88e-19!1;DOID:0060061!1.88e-19!1;DOID:8691!1.88e-19!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.30e-40;1!DOID:0060061;3.30e-40;1!DOID:8691;3.30e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.30e-40,1;DOID:0060061,3.30e-40,1;DOID:8691,3.30e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!4.23e-17!10;UBERON:0000358!4.23e-17!10;UBERON:0000307!4.23e-17!10;UBERON:0000091!4.23e-17!10;UBERON:0000087!4.23e-17!10;UBERON:0007806!4.23e-17!10;UBERON:0008780!4.23e-17!10;UBERON:0005728!4.23e-17!10;UBERON:0000178!1.27e-11!15;UBERON:0000179!1.27e-11!15;UBERON:0000463!1.27e-11!15;UBERON:0000478!1.76e-07!24 | |ontology_enrichment_uberon=UBERON:0002331!4.23e-17!10;UBERON:0000358!4.23e-17!10;UBERON:0000307!4.23e-17!10;UBERON:0000091!4.23e-17!10;UBERON:0000087!4.23e-17!10;UBERON:0007806!4.23e-17!10;UBERON:0008780!4.23e-17!10;UBERON:0005728!4.23e-17!10;UBERON:0000178!1.27e-11!15;UBERON:0000179!1.27e-11!15;UBERON:0000463!1.27e-11!15;UBERON:0000478!1.76e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.44e-36;10!UBERON:0000178;1.78e-24;15!UBERON:0000179;1.78e-24;15!UBERON:0000463;1.78e-24;15!UBERON:0000478;1.19e-15;24!UBERON:0002390;4.69e-12;32!UBERON:0000922;6.30e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.44e-36,10;UBERON:0000358,3.44e-36,10;UBERON:0000307,3.44e-36,10;UBERON:0000091,3.44e-36,10;UBERON:0000087,3.44e-36,10;UBERON:0007010,3.44e-36,10;UBERON:0007806,3.44e-36,10;UBERON:0008780,3.44e-36,10;UBERON:0005728,3.44e-36,10;UBERON:0000178,1.78e-24,15;UBERON:0000179,1.78e-24,15;UBERON:0000463,1.78e-24,15;UBERON:0000478,1.19e-15,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52346483097368,7.78452815362968,7.51838036439279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5619033195968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52346483097368,7.78452815362968,7.51838036439279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5619033195968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:6890042..6890078,+ | |short_description=p@chr12:6890042..6890078,+ | ||
}} | }} |
Latest revision as of 11:44, 24 July 2015
Short description: | p@chr12:6890042..6890078, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6890042..6890078, + |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.35e-07 | 25 |
pro-T cell | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.44e-36 | 10 |
blastocyst | 3.44e-36 | 10 |
blastula | 3.44e-36 | 10 |
bilaminar disc | 3.44e-36 | 10 |
inner cell mass | 3.44e-36 | 10 |
cleaving embryo | 3.44e-36 | 10 |
connecting stalk | 3.44e-36 | 10 |
inner cell mass derived epiblast | 3.44e-36 | 10 |
extraembryonic mesoderm | 3.44e-36 | 10 |
blood | 1.78e-24 | 15 |
haemolymphatic fluid | 1.78e-24 | 15 |
organism substance | 1.78e-24 | 15 |
extraembryonic structure | 1.19e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.30e-40 | 1 |
cutaneous T cell lymphoma | 3.30e-40 | 1 |
mycosis fungoides | 3.30e-40 | 1 |