FFCP PHASE1:Hg19::chr13:28971192..28971206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:28971192..28971206,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr13:28971192..28971206,- | |description=CAGE_peak_at_chr13:28971192..28971206,- | ||
|id=chr13:28971192..28971206,- | |id=chr13:28971192..28971206,- | ||
|ontology_enrichment_celltype=CL:0002541!4.40e-08!3 | |ontology_enrichment_celltype=CL:0002541!4.40e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.81e-34;3!CL:0000349;1.60e-12;19!CL:0000860;7.58e-11;33!CL:0002057;7.58e-11;33!CL:0000473;1.63e-09;39!CL:0000234;1.63e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.81e-34,3;CL:0000349,1.77e-12,19;CL:0000860,7.40e-10,42;CL:0002057,7.40e-10,42;CL:0000473,1.13e-08,48;CL:0000234,1.13e-08,48;CL:0002194,5.19e-07,59;CL:0000576,5.19e-07,59;CL:0000040,5.19e-07,59;CL:0000559,5.19e-07,59;CL:0002009,8.52e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0003056;1.47e-09;3!CL:0002057;7.66e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-15!115;UBERON:0002780!8.40e-09!41;UBERON:0001890!8.40e-09!41;UBERON:0006240!8.40e-09!41;UBERON:0003080!1.63e-08!42;UBERON:0002791!1.95e-08!33;UBERON:0002020!2.71e-08!34;UBERON:0003528!2.71e-08!34;UBERON:0001893!4.12e-08!34;UBERON:0000476!4.40e-08!3;UBERON:0000920!4.40e-08!3;UBERON:0002771!1.20e-07!3;UBERON:0001869!1.62e-07!32;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.94e-15!115;UBERON:0002780!8.40e-09!41;UBERON:0001890!8.40e-09!41;UBERON:0006240!8.40e-09!41;UBERON:0003080!1.63e-08!42;UBERON:0002791!1.95e-08!33;UBERON:0002020!2.71e-08!34;UBERON:0003528!2.71e-08!34;UBERON:0001893!4.12e-08!34;UBERON:0000476!4.40e-08!3;UBERON:0000920!4.40e-08!3;UBERON:0002771!1.20e-07!3;UBERON:0001869!1.62e-07!32;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.81e-34;3!UBERON:0000920;2.81e-34;3!UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0005631;4.25e-23;10!UBERON:0000158;4.25e-23;10!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0000478;4.70e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.81e-34,3;UBERON:0000941,4.61e-26,1;UBERON:0001785,4.61e-26,1;UBERON:0002464,4.61e-26,1;UBERON:0004904,4.61e-26,1;UBERON:0001021,4.61e-26,1;UBERON:0003902,4.61e-26,1;UBERON:0005425,4.61e-26,1;UBERON:0005631,1.14e-16,14;UBERON:0000158,1.14e-16,14;UBERON:0003124,2.47e-15,7;UBERON:0003714,9.40e-14,2;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0000478,5.07e-10,24;UBERON:0001781,1.59e-07,4 | |||
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| ||
|short_description=p@chr13:28971192..28971206,- | |short_description=p@chr13:28971192..28971206,- | ||
}} | }} |
Latest revision as of 15:24, 24 July 2015
Short description: | p@chr13:28971192..28971206, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28971192..28971206, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.81e-34 | 3 |
extraembryonic cell | 1.77e-12 | 19 |
classical monocyte | 7.40e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.40e-10 | 42 |
defensive cell | 1.13e-08 | 48 |
phagocyte | 1.13e-08 | 48 |
monopoietic cell | 5.19e-07 | 59 |
monocyte | 5.19e-07 | 59 |
monoblast | 5.19e-07 | 59 |
promonocyte | 5.19e-07 | 59 |
macrophage dendritic cell progenitor | 8.52e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.81e-34 | 3 |
cranial nerve II | 4.61e-26 | 1 |
cranial nerve | 4.61e-26 | 1 |
nerve trunk | 4.61e-26 | 1 |
nerve connecting eye with brain | 4.61e-26 | 1 |
nerve | 4.61e-26 | 1 |
retinal neural layer | 4.61e-26 | 1 |
presumptive neural retina | 4.61e-26 | 1 |
extraembryonic membrane | 1.14e-16 | 14 |
membranous layer | 1.14e-16 | 14 |
chorion | 2.47e-15 | 7 |
neural tissue | 9.40e-14 | 2 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
extraembryonic structure | 5.07e-10 | 24 |
layer of retina | 1.59e-07 | 4 |