FFCP PHASE1:Hg19::chr13:33924303..33924330,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:33924303..33924330,+ | |||
|description=CAGE_peak_at_chr13:33924303..33924330,+ | |description=CAGE_peak_at_chr13:33924303..33924330,+ | ||
|id=chr13:33924303..33924330,+ | |id=chr13:33924303..33924330,+ | ||
|ontology_enrichment_celltype=CL:0000839!7.35e-16!70;CL:0000557!2.08e-15!71;CL:0000766!2.26e-14!76;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0002009!6.50e-13!65;CL:0002057!2.91e-12!42;CL:0000860!9.60e-11!45;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9 | |ontology_enrichment_celltype=CL:0000839!7.35e-16!70;CL:0000557!2.08e-15!71;CL:0000766!2.26e-14!76;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0002009!6.50e-13!65;CL:0002057!2.91e-12!42;CL:0000860!9.60e-11!45;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.33e-16;5!CL:0002393;7.95e-13;6!CL:0002397;7.95e-13;6!CL:0000576;2.95e-12;48!CL:0002619;1.77e-11;3!CL:0000766;5.09e-11;69!CL:0000163;5.61e-09;9 | |ontology_enrichment_celltype_v019=CL:0000097;9.33e-16;5!CL:0002393;7.95e-13;6!CL:0002397;7.95e-13;6!CL:0000576;2.95e-12;48!CL:0002619;1.77e-11;3!CL:0000766;5.09e-11;69!CL:0000163;5.61e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.39e-21,66;CL:0000557,1.19e-20,67;CL:0000766,4.59e-19,72;CL:0000097,9.35e-16,5;CL:0002028,9.35e-16,5;CL:0002393,1.08e-14,9;CL:0002397,1.08e-14,9;CL:0002194,3.44e-14,59;CL:0000576,3.44e-14,59;CL:0000040,3.44e-14,59;CL:0000559,3.44e-14,59;CL:0002009,1.13e-13,61;CL:0000473,4.27e-12,48;CL:0000234,4.27e-12,48;CL:0000763,6.11e-12,108;CL:0000049,6.11e-12,108;CL:0002619,1.29e-11,3;CL:0000860,4.14e-11,42;CL:0002057,4.14e-11,42;CL:0002031,1.66e-10,120;CL:0000738,5.49e-09,136;CL:0000163,5.62e-09,9;CL:0002032,3.25e-07,161;CL:0000837,3.25e-07,161;CL:0000037,8.19e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-08;42!UBERON:0007123;2.25e-07;5 | |ontology_enrichment_development_v019=CL:0002057;1.10e-08;42!UBERON:0007123;2.25e-07;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.48e-16!167;UBERON:0004765!9.54e-14!101;UBERON:0001434!9.54e-14!101;UBERON:0002371!1.22e-13!80;UBERON:0001474!7.48e-13!86;UBERON:0002193!6.87e-11!112;UBERON:0002390!9.15e-11!102;UBERON:0003061!9.15e-11!102;UBERON:0002405!6.56e-09!115;UBERON:0000467!9.11e-09!625;UBERON:0000480!1.16e-08!626;UBERON:0003081!2.10e-08!216;UBERON:0000468!4.35e-08!659;UBERON:0000926!5.48e-07!448;UBERON:0004120!5.48e-07!448;UBERON:0006603!5.48e-07!448;UBERON:0000923!5.81e-07!604;UBERON:0005291!5.81e-07!604;UBERON:0006598!5.81e-07!604;UBERON:0002532!5.81e-07!604;UBERON:0002050!7.17e-07!605;UBERON:0005423!7.17e-07!605 | |ontology_enrichment_uberon=UBERON:0002204!4.48e-16!167;UBERON:0004765!9.54e-14!101;UBERON:0001434!9.54e-14!101;UBERON:0002371!1.22e-13!80;UBERON:0001474!7.48e-13!86;UBERON:0002193!6.87e-11!112;UBERON:0002390!9.15e-11!102;UBERON:0003061!9.15e-11!102;UBERON:0002405!6.56e-09!115;UBERON:0000467!9.11e-09!625;UBERON:0000480!1.16e-08!626;UBERON:0003081!2.10e-08!216;UBERON:0000468!4.35e-08!659;UBERON:0000926!5.48e-07!448;UBERON:0004120!5.48e-07!448;UBERON:0006603!5.48e-07!448;UBERON:0000923!5.81e-07!604;UBERON:0005291!5.81e-07!604;UBERON:0006598!5.81e-07!604;UBERON:0002532!5.81e-07!604;UBERON:0002050!7.17e-07!605;UBERON:0005423!7.17e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0002046;2.25e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001000;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0002046;2.25e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.35e-21,76;UBERON:0001474,4.63e-19,82;UBERON:0004765,3.78e-17,90;UBERON:0002405,1.63e-16,93;UBERON:0002390,1.52e-15,98;UBERON:0003061,1.52e-15,98;UBERON:0001434,3.49e-15,100;UBERON:0002193,7.18e-14,108;UBERON:0001000,1.84e-09,1;UBERON:0005352,1.84e-09,1;UBERON:0002204,4.79e-08,167;UBERON:0002046,2.21e-07,5;UBERON:0004117,2.21e-07,5;UBERON:0007689,2.21e-07,5;UBERON:0007123,2.21e-07,5;UBERON:0003091,2.21e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0,0,0.928896739896456,0,0.6024118375565,0,0,0,0,0,0.802177789880567,0.434021741431704,1.34349284543955,0.647787332037959,1.54545340580512,0.145398238779565,0.755751887377619,0.242584061187816,0.929716147622738,1.23350366406548,0.929119112685311,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0.329851300186716,0.199463657621632,0,0,1.13477044938228,0,0.502497330513487,2.08593167368081,0,0,1.10483290796269,0,3.16882929467913,1.27562579979026,2.51590374610051,0.898629049171961,0.300353785683013,0.32145117339416,1.42506371870624,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0.728590576585084,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0,0,0,0.66944122552934,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0,0.280901613404497,0,0.368502951935304,0.413303124703062,1.18800285728205,0.741800787835671,0.910161361938026,0,0,0.250237039743928,0,0.877955241761676,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0.412210116953756,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0.246217006087397,0,0.594524649154913,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,4.35389042635621,5.04419836959365,4.29224273649692,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.356857977594324,0,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.246381468041427,0,0.232420756919918,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.0890320356467374,0.165284915360978,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0.848432591722276,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,1.57833761139756,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.157363764404994,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.511164065356265,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,1.0027595760908,0.306345576763462,0,0,0,0,0,0,0.221858103073705,0.434674820589684,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr13:33924303..33924330,+ | |short_description=p@chr13:33924303..33924330,+ | ||
}} | }} |
Latest revision as of 15:43, 24 July 2015
Short description: | p@chr13:33924303..33924330, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:33924303..33924330, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.39e-21 | 66 |
granulocyte monocyte progenitor cell | 1.19e-20 | 67 |
myeloid leukocyte | 4.59e-19 | 72 |
mast cell | 9.35e-16 | 5 |
basophil mast progenitor cell | 9.35e-16 | 5 |
intermediate monocyte | 1.08e-14 | 9 |
CD14-positive, CD16-positive monocyte | 1.08e-14 | 9 |
monopoietic cell | 3.44e-14 | 59 |
monocyte | 3.44e-14 | 59 |
monoblast | 3.44e-14 | 59 |
promonocyte | 3.44e-14 | 59 |
macrophage dendritic cell progenitor | 1.13e-13 | 61 |
defensive cell | 4.27e-12 | 48 |
phagocyte | 4.27e-12 | 48 |
myeloid cell | 6.11e-12 | 108 |
common myeloid progenitor | 6.11e-12 | 108 |
adult endothelial progenitor cell | 1.29e-11 | 3 |
classical monocyte | 4.14e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.14e-11 | 42 |
hematopoietic lineage restricted progenitor cell | 1.66e-10 | 120 |
leukocyte | 5.49e-09 | 136 |
endocrine cell | 5.62e-09 | 9 |
hematopoietic oligopotent progenitor cell | 3.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.25e-07 | 161 |
hematopoietic stem cell | 8.19e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.35e-21 | 76 |
bone element | 4.63e-19 | 82 |
skeletal element | 3.78e-17 | 90 |
immune system | 1.63e-16 | 93 |
hematopoietic system | 1.52e-15 | 98 |
blood island | 1.52e-15 | 98 |
skeletal system | 3.49e-15 | 100 |
hemolymphoid system | 7.18e-14 | 108 |
vas deferens | 1.84e-09 | 1 |
spermatic cord | 1.84e-09 | 1 |
musculoskeletal system | 4.79e-08 | 167 |
thyroid gland | 2.21e-07 | 5 |
pharyngeal pouch | 2.21e-07 | 5 |
thyroid diverticulum | 2.21e-07 | 5 |
pharyngeal pouch 2 | 2.21e-07 | 5 |
thyroid primordium | 2.21e-07 | 5 |