FFCP PHASE1:Hg19::chr14:25044011..25044022,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:25044011..25044022,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr14:25044011..25044022,- | |description=CAGE_peak_at_chr14:25044011..25044022,- | ||
|id=chr14:25044011..25044022,- | |id=chr14:25044011..25044022,- | ||
|ontology_enrichment_celltype=CL:0002274!4.90e-45!5;CL:0000457!4.90e-45!5;CL:0002191!4.90e-45!5;CL:0000097!4.90e-45!5;CL:0000831!4.90e-45!5;CL:0002028!4.90e-45!5;CL:0000163!5.07e-25!9;CL:0000763!3.29e-17!112;CL:0000049!3.29e-17!112;CL:0000037!8.35e-12!172;CL:0000566!8.35e-12!172;CL:0000988!5.34e-11!182;CL:0002032!7.86e-11!165;CL:0000837!7.86e-11!165;CL:0001024!5.30e-10!1;CL:0000839!5.22e-07!70;CL:0000557!6.76e-07!71 | |ontology_enrichment_celltype=CL:0002274!4.90e-45!5;CL:0000457!4.90e-45!5;CL:0002191!4.90e-45!5;CL:0000097!4.90e-45!5;CL:0000831!4.90e-45!5;CL:0002028!4.90e-45!5;CL:0000163!5.07e-25!9;CL:0000763!3.29e-17!112;CL:0000049!3.29e-17!112;CL:0000037!8.35e-12!172;CL:0000566!8.35e-12!172;CL:0000988!5.34e-11!182;CL:0002032!7.86e-11!165;CL:0000837!7.86e-11!165;CL:0001024!5.30e-10!1;CL:0000839!5.22e-07!70;CL:0000557!6.76e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.92e-110;5!CL:0000163;2.13e-61;9!CL:0000151;2.41e-14;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-110,5;CL:0002028,4.92e-110,5;CL:0000163,2.13e-61,9;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0000151,1.28e-15,36;CL:0000839,6.62e-12,66;CL:0000557,9.91e-12,67;CL:0000766,6.31e-11,72;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.97e-32!31;DOID:1240!3.43e-25!39;DOID:2531!7.36e-19!51;DOID:0060083!7.36e-19!51;DOID:225!1.07e-09!1 | |ontology_enrichment_disease=DOID:8692!3.97e-32!31;DOID:1240!3.43e-25!39;DOID:2531!7.36e-19!51;DOID:0060083!7.36e-19!51;DOID:225!1.07e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.39e-10;31!DOID:1240;4.17e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.16e-11,31;DOID:1240,2.38e-09,39;DOID:2531,3.14e-07,51;DOID:0060083,3.14e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001301!8.99e-10!1;UBERON:0002371!1.37e-07!80;UBERON:0001474!5.63e-07!86 | |ontology_enrichment_uberon=UBERON:0001301!8.99e-10!1;UBERON:0002371!1.37e-07!80;UBERON:0001474!5.63e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.34e-10,76;UBERON:0001474,1.32e-09,82;UBERON:0004765,9.34e-09,90;UBERON:0002405,1.79e-08,93;UBERON:0002390,4.84e-08,98;UBERON:0003061,4.84e-08,98;UBERON:0001434,7.01e-08,100;UBERON:0002193,2.70e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,4.57851856868775,10.7810620081201,9.94427678577034,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0.842391534340376,0,0.156679895773023,2.50634477090067,0,0,0,1.27753871307098,1.71752672377882,0.921722292925374,0.671028323677248,1.16794399198336,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,4.57851856868775,10.7810620081201,9.94427678577034,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0.842391534340376,0,0.156679895773023,2.50634477090067,0,0,0,1.27753871307098,1.71752672377882,0.921722292925374,0.671028323677248,1.16794399198336,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:25044011..25044022,- | |short_description=p@chr14:25044011..25044022,- | ||
}} | }} |
Latest revision as of 19:57, 24 July 2015
Short description: | p@chr14:25044011..25044022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:25044011..25044022, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-110 | 5 |
basophil mast progenitor cell | 4.92e-110 | 5 |
endocrine cell | 2.13e-61 | 9 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
secretory cell | 1.28e-15 | 36 |
myeloid lineage restricted progenitor cell | 6.62e-12 | 66 |
granulocyte monocyte progenitor cell | 9.91e-12 | 67 |
myeloid leukocyte | 6.31e-11 | 72 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.34e-10 | 76 |
bone element | 1.32e-09 | 82 |
skeletal element | 9.34e-09 | 90 |
immune system | 1.79e-08 | 93 |
hematopoietic system | 4.84e-08 | 98 |
blood island | 4.84e-08 | 98 |
skeletal system | 7.01e-08 | 100 |
hemolymphoid system | 2.70e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.16e-11 | 31 |
leukemia | 2.38e-09 | 39 |
hematologic cancer | 3.14e-07 | 51 |
immune system cancer | 3.14e-07 | 51 |