FFCP PHASE1:Hg19::chr14:71164663..71164679,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:71164663..71164679,+ | |||
|description=CAGE_peak_at_chr14:71164663..71164679,+ | |description=CAGE_peak_at_chr14:71164663..71164679,+ | ||
|id=chr14:71164663..71164679,+ | |id=chr14:71164663..71164679,+ | ||
|ontology_enrichment_celltype=CL:0000860!8.24e-39!45;CL:0002057!5.21e-38!42;CL:0002194!9.80e-32!63;CL:0000576!9.80e-32!63;CL:0000040!9.80e-32!63;CL:0000559!9.80e-32!63;CL:0002009!2.33e-30!65;CL:0000839!2.87e-27!70;CL:0000557!1.05e-26!71;CL:0000766!2.06e-25!76;CL:0000763!4.56e-14!112;CL:0000049!4.56e-14!112;CL:0002087!2.17e-13!119;CL:0000738!3.16e-10!140;CL:0002031!3.34e-10!124;CL:0000066!5.02e-10!254;CL:0000063!6.69e-10!578;CL:0002076!1.55e-07!43;CL:0000037!9.44e-07!172;CL:0000566!9.44e-07!172 | |ontology_enrichment_celltype=CL:0000860!8.24e-39!45;CL:0002057!5.21e-38!42;CL:0002194!9.80e-32!63;CL:0000576!9.80e-32!63;CL:0000040!9.80e-32!63;CL:0000559!9.80e-32!63;CL:0002009!2.33e-30!65;CL:0000839!2.87e-27!70;CL:0000557!1.05e-26!71;CL:0000766!2.06e-25!76;CL:0000763!4.56e-14!112;CL:0000049!4.56e-14!112;CL:0002087!2.17e-13!119;CL:0000738!3.16e-10!140;CL:0002031!3.34e-10!124;CL:0000066!5.02e-10!254;CL:0000063!6.69e-10!578;CL:0002076!1.55e-07!43;CL:0000037!9.44e-07!172;CL:0000566!9.44e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.49e-43;33!CL:0002057;5.49e-43;33!CL:0000473;1.30e-27;39!CL:0000234;1.30e-27;39!CL:0000576;7.94e-23;48!CL:0000766;3.11e-09;69!CL:0000511;6.62e-08;1!CL:0002625;6.62e-08;1!CL:0000216;6.62e-08;1!CL:0002591;6.62e-08;1!CL:0000763;1.19e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.73e-37,42;CL:0002057,1.73e-37,42;CL:0000473,2.07e-32,48;CL:0000234,2.07e-32,48;CL:0002194,2.68e-25,59;CL:0000576,2.68e-25,59;CL:0000040,2.68e-25,59;CL:0000559,2.68e-25,59;CL:0002009,2.22e-24,61;CL:0000839,2.52e-22,66;CL:0000557,5.97e-22,67;CL:0000766,3.13e-20,72;CL:0000763,1.67e-12,108;CL:0000049,1.67e-12,108;CL:0002087,1.47e-11,115;CL:0002031,5.94e-11,120;CL:0000738,2.62e-09,136;CL:0000511,4.40e-08,1;CL:0002625,4.40e-08,1;CL:0000216,4.40e-08,1;CL:0002591,9.29e-08,1;CL:0000988,1.87e-07,177;CL:0002032,2.14e-07,161;CL:0000837,2.14e-07,161;CL:0000037,5.80e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-25;42!CL:0000049;9.32e-07;108 | |||
|ontology_enrichment_disease=DOID:305!6.57e-16!106;DOID:0050687!4.97e-10!143;DOID:1749!1.75e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.62e-08;1!DOID:3603;6.62e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.58e-08,1;DOID:3603,3.58e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.85e-22!80;UBERON:0001474!7.57e-20!86;UBERON:0002390!7.09e-19!102;UBERON:0003061!7.09e-19!102;UBERON:0004765!3.50e-17!101;UBERON:0001434!3.50e-17!101;UBERON:0002193!4.23e-17!112;UBERON:0002405!9.03e-13!115;UBERON:0000065!5.25e-09!53;UBERON:0001004!6.40e-08!72;UBERON:0000926!7.41e-08!448;UBERON:0004120!7.41e-08!448;UBERON:0006603!7.41e-08!448;UBERON:0002204!1.57e-07!167;UBERON:0005911!6.86e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.52e-08;1!UBERON:0003703;2.52e-08;1!UBERON:0001174;2.52e-08;1!UBERON:0004914;2.52e-08;1!UBERON:0002394;5.50e-08;4!UBERON:0003928;5.50e-08;4!UBERON:0001136;6.62e-08;1!UBERON:0001343;6.62e-08;1!UBERON:0004910;6.62e-08;1!UBERON:0004813;6.62e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.15e-19,76;UBERON:0001474,2.07e-17,82;UBERON:0004765,1.33e-15,90;UBERON:0002405,5.29e-15,93;UBERON:0002390,4.37e-14,98;UBERON:0003061,4.37e-14,98;UBERON:0001434,9.59e-14,100;UBERON:0002193,1.67e-12,108;UBERON:0004913,3.11e-08,1;UBERON:0003703,3.11e-08,1;UBERON:0001174,3.11e-08,1;UBERON:0004914,3.11e-08,1;UBERON:0002204,4.34e-08,167;UBERON:0001136,4.40e-08,1;UBERON:0001343,4.40e-08,1;UBERON:0004910,4.40e-08,1;UBERON:0005154,4.40e-08,1;UBERON:0005295,4.40e-08,1;UBERON:0004813,4.40e-08,1;UBERON:0005297,4.40e-08,1;UBERON:0005294,4.40e-08,1;UBERON:0010141,4.40e-08,1;UBERON:0005891,4.40e-08,1;UBERON:0003081,5.14e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,2.61716829803216,0.755751887377619,0.727752183563449,0.929716147622738,0.822335776043652,0.309706370895104,0.575384784644301,1.0246428261164,1.18241114944293,0.344745680736619,0.645484683583826,0,0.941211697713023,1.09162460023138,0,1.53041946185451,0.320929027076094,0.639337125799041,1.31940520074686,2.39356389145958,2.13112375266347,2.03146467040009,1.13477044938228,1.24564449799115,2.51248665256743,1.5644487552606,0.65156653411535,2.42159801053347,1.10483290796269,2.21523671208619,0.211255286311942,0.425208599930087,0,0.44931452458598,0.600707571366025,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.289693037921647,1.5905718941022,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0.120859449591622,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.826424576804891,0.192190067365106,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.898683511473268,9.30910108313168,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.685946781900644,0.609414446062818,0,0,0,0.146178634172371,0.164230914106418,0.290967049465258,0,0,0,0,0,0.782205530939212,0.160317640503067,0,0,0.144090417154106,0,0,1.4405479798815,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86741031243341,0.106787412567695,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,1.90180911022764,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0,0,0,0,0,0,0,0.118193840883968,0.778619813244484,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.320965466756673,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0.870866991587845,0,0.942928742204225,2.15166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,2.61716829803216,0.755751887377619,0.727752183563449,0.929716147622738,0.822335776043652,0.309706370895104,0.575384784644301,1.0246428261164,1.18241114944293,0.344745680736619,0.645484683583826,0,0.941211697713023,1.09162460023138,0,1.53041946185451,0.320929027076094,0.639337125799041,1.31940520074686,2.39356389145958,2.13112375266347,2.03146467040009,1.13477044938228,1.24564449799115,2.51248665256743,1.5644487552606,0.65156653411535,2.42159801053347,1.10483290796269,2.21523671208619,0.211255286311942,0.425208599930087,0,0.44931452458598,0.600707571366025,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.289693037921647,1.5905718941022,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0.120859449591622,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.826424576804891,0.192190067365106,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.898683511473268,9.30910108313168,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.685946781900644,0.609414446062818,0,0,0,0.146178634172371,0.164230914106418,0.290967049465258,0,0,0,0,0,0.782205530939212,0.160317640503067,0,0,0.144090417154106,0,0,1.4405479798815,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86741031243341,0.106787412567695,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,1.90180911022764,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0,0,0,0,0,0,0,0.118193840883968,0.778619813244484,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.320965466756673,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0.870866991587845,0,0.942928742204225,2.15166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:71164663..71164679,+ | |short_description=p@chr14:71164663..71164679,+ | ||
}} | }} |
Latest revision as of 22:24, 24 July 2015
Short description: | p@chr14:71164663..71164679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:71164663..71164679, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.73e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-37 | 42 |
defensive cell | 2.07e-32 | 48 |
phagocyte | 2.07e-32 | 48 |
monopoietic cell | 2.68e-25 | 59 |
monocyte | 2.68e-25 | 59 |
monoblast | 2.68e-25 | 59 |
promonocyte | 2.68e-25 | 59 |
macrophage dendritic cell progenitor | 2.22e-24 | 61 |
myeloid lineage restricted progenitor cell | 2.52e-22 | 66 |
granulocyte monocyte progenitor cell | 5.97e-22 | 67 |
myeloid leukocyte | 3.13e-20 | 72 |
myeloid cell | 1.67e-12 | 108 |
common myeloid progenitor | 1.67e-12 | 108 |
nongranular leukocyte | 1.47e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.94e-11 | 120 |
leukocyte | 2.62e-09 | 136 |
androgen binding protein secreting cell | 4.40e-08 | 1 |
seminiferous tubule epithelial cell | 4.40e-08 | 1 |
Sertoli cell | 4.40e-08 | 1 |
smooth muscle cell of the pulmonary artery | 9.29e-08 | 1 |
hematopoietic cell | 1.87e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.14e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-07 | 161 |
hematopoietic stem cell | 5.80e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.15e-19 | 76 |
bone element | 2.07e-17 | 82 |
skeletal element | 1.33e-15 | 90 |
immune system | 5.29e-15 | 93 |
hematopoietic system | 4.37e-14 | 98 |
blood island | 4.37e-14 | 98 |
skeletal system | 9.59e-14 | 100 |
hemolymphoid system | 1.67e-12 | 108 |
hepatopancreatic ampulla | 3.11e-08 | 1 |
extrahepatic bile duct | 3.11e-08 | 1 |
common bile duct | 3.11e-08 | 1 |
duodenal papilla | 3.11e-08 | 1 |
musculoskeletal system | 4.34e-08 | 167 |
mesothelium | 4.40e-08 | 1 |
seminiferous tubule of testis | 4.40e-08 | 1 |
epithelium of male gonad | 4.40e-08 | 1 |
epithelial cord | 4.40e-08 | 1 |
sex cord | 4.40e-08 | 1 |
seminiferous tubule epithelium | 4.40e-08 | 1 |
testis sex cord | 4.40e-08 | 1 |
genital ridge | 4.40e-08 | 1 |
primitive sex cord of indifferent gonad | 4.40e-08 | 1 |
coelomic epithelium | 4.40e-08 | 1 |
lateral plate mesoderm | 5.14e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.58e-08 | 1 |
mucinous cystadenocarcinoma | 3.58e-08 | 1 |