FFCP PHASE1:Hg19::chr14:75033780..75033781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75033780..75033781,+ | |||
|coexpression_cluster_id=C1399 | |coexpression_cluster_id=C1399 | ||
|description=CAGE_peak_at_chr14:75033780..75033781,+ | |description=CAGE_peak_at_chr14:75033780..75033781,+ | ||
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|ontology_enrichment_celltype=CL:0000066!8.45e-24!254;CL:0002076!1.34e-21!43;CL:0002368!3.18e-21!13;CL:0000223!2.79e-14!59;CL:0002159!9.62e-13!13;CL:0002202!5.78e-12!9;CL:0002632!5.78e-12!9;CL:0000068!3.72e-10!3;CL:0000069!3.72e-10!3;CL:0000307!3.72e-10!3;CL:0000377!3.72e-10!3;CL:0000349!3.95e-10!3;CL:0002577!3.95e-10!3;CL:0000076!5.64e-10!62;CL:0002328!6.14e-10!3;CL:0002621!3.07e-09!3;CL:0002541!3.73e-09!3;CL:0002166!6.68e-09!3;CL:0000240!6.02e-08!6;CL:0000311!6.02e-08!6;CL:0000079!6.02e-08!6;CL:0000237!6.02e-08!6;CL:0000036!6.02e-08!6;CL:0000357!6.02e-08!6;CL:0000114!6.02e-08!6;CL:0000244!1.68e-07!4;CL:0000731!1.68e-07!4;CL:0000063!1.89e-07!578;CL:0002327!5.93e-07!4;CL:0000220!8.54e-07!246 | |ontology_enrichment_celltype=CL:0000066!8.45e-24!254;CL:0002076!1.34e-21!43;CL:0002368!3.18e-21!13;CL:0000223!2.79e-14!59;CL:0002159!9.62e-13!13;CL:0002202!5.78e-12!9;CL:0002632!5.78e-12!9;CL:0000068!3.72e-10!3;CL:0000069!3.72e-10!3;CL:0000307!3.72e-10!3;CL:0000377!3.72e-10!3;CL:0000349!3.95e-10!3;CL:0002577!3.95e-10!3;CL:0000076!5.64e-10!62;CL:0002328!6.14e-10!3;CL:0002621!3.07e-09!3;CL:0002541!3.73e-09!3;CL:0002166!6.68e-09!3;CL:0000240!6.02e-08!6;CL:0000311!6.02e-08!6;CL:0000079!6.02e-08!6;CL:0000237!6.02e-08!6;CL:0000036!6.02e-08!6;CL:0000357!6.02e-08!6;CL:0000114!6.02e-08!6;CL:0000244!1.68e-07!4;CL:0000731!1.68e-07!4;CL:0000063!1.89e-07!578;CL:0002327!5.93e-07!4;CL:0000220!8.54e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002577;8.35e-46;3!CL:0002368;1.01e-29;13!CL:0002202;5.75e-28;9!CL:0002632;5.75e-28;9!CL:0002328;8.09e-22;3!CL:0000307;1.11e-21;3!CL:0000312;4.96e-13;5!CL:0000240;5.09e-11;6!CL:0000311;5.09e-11;6!CL:0000079;5.09e-11;6!CL:0000237;5.09e-11;6!CL:0000349;8.68e-08;19!CL:0000362;1.20e-07;9!CL:0002076;7.72e-07;42 | |ontology_enrichment_celltype_v019=CL:0002577;8.35e-46;3!CL:0002368;1.01e-29;13!CL:0002202;5.75e-28;9!CL:0002632;5.75e-28;9!CL:0002328;8.09e-22;3!CL:0000307;1.11e-21;3!CL:0000312;4.96e-13;5!CL:0000240;5.09e-11;6!CL:0000311;5.09e-11;6!CL:0000079;5.09e-11;6!CL:0000237;5.09e-11;6!CL:0000349;8.68e-08;19!CL:0000362;1.20e-07;9!CL:0002076;7.72e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.74e-46,3;CL:0002368,8.71e-30,13;CL:0002202,5.75e-28,9;CL:0002632,5.75e-28,9;CL:0002328,8.53e-22,3;CL:0000068,1.05e-21,3;CL:0000069,1.05e-21,3;CL:0000307,1.05e-21,3;CL:0000377,1.05e-21,3;CL:0000312,6.32e-13,5;CL:0000240,6.24e-11,6;CL:0000311,6.24e-11,6;CL:0000079,6.24e-11,6;CL:0000237,6.24e-11,6;CL:0000036,6.24e-11,6;CL:0000357,6.24e-11,6;CL:0000114,6.24e-11,6;CL:0002076,2.92e-09,42;CL:0000349,8.58e-08,19;CL:0000066,1.37e-07,253;CL:0000362,1.38e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.11e-21;3!CL:0000357;5.09e-11;6!CL:0000114;5.09e-11;6 | |ontology_enrichment_development_v019=CL:0000377;1.11e-21;3!CL:0000357;5.09e-11;6!CL:0000114;5.09e-11;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.10e-19!7;UBERON:0005631!2.60e-18!14;UBERON:0000158!2.60e-18!14;UBERON:0001987!3.02e-12!4;UBERON:0004340!3.02e-12!4;UBERON:0004119!2.40e-10!169;UBERON:0000925!2.40e-10!169;UBERON:0006595!2.40e-10!169;UBERON:0004815!6.14e-10!3;UBERON:0002031!6.14e-10!3;UBERON:0000478!8.64e-10!24;UBERON:0000365!1.62e-09!5;UBERON:0001004!2.38e-09!72;UBERON:0001949!3.07e-09!3;UBERON:0000476!3.73e-09!3;UBERON:0000920!3.73e-09!3;UBERON:0004923!2.01e-08!57;UBERON:0005910!6.35e-08!6;UBERON:0002185!1.57e-07!4;UBERON:0007196!2.20e-07!14;UBERON:0001558!2.20e-07!14;UBERON:0000065!2.43e-07!53;UBERON:0003100!2.75e-07!41;UBERON:0005153!4.79e-07!37;UBERON:0001911!5.93e-07!4;UBERON:0005333!5.93e-07!4;UBERON:0008425!5.93e-07!4;UBERON:0005311!5.93e-07!4;UBERON:0001708!9.10e-07!4;UBERON:0001704!9.10e-07!4 | |ontology_enrichment_uberon=UBERON:0003124!1.10e-19!7;UBERON:0005631!2.60e-18!14;UBERON:0000158!2.60e-18!14;UBERON:0001987!3.02e-12!4;UBERON:0004340!3.02e-12!4;UBERON:0004119!2.40e-10!169;UBERON:0000925!2.40e-10!169;UBERON:0006595!2.40e-10!169;UBERON:0004815!6.14e-10!3;UBERON:0002031!6.14e-10!3;UBERON:0000478!8.64e-10!24;UBERON:0000365!1.62e-09!5;UBERON:0001004!2.38e-09!72;UBERON:0001949!3.07e-09!3;UBERON:0000476!3.73e-09!3;UBERON:0000920!3.73e-09!3;UBERON:0004923!2.01e-08!57;UBERON:0005910!6.35e-08!6;UBERON:0002185!1.57e-07!4;UBERON:0007196!2.20e-07!14;UBERON:0001558!2.20e-07!14;UBERON:0000065!2.43e-07!53;UBERON:0003100!2.75e-07!41;UBERON:0005153!4.79e-07!37;UBERON:0001911!5.93e-07!4;UBERON:0005333!5.93e-07!4;UBERON:0008425!5.93e-07!4;UBERON:0005311!5.93e-07!4;UBERON:0001708!9.10e-07!4;UBERON:0001704!9.10e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.43e-34;4!UBERON:0004815;8.09e-22;3!UBERON:0002031;8.09e-22;3!UBERON:0007196;6.06e-17;15!UBERON:0001558;6.06e-17;15!UBERON:0002185;1.68e-13;5!UBERON:0000485;6.55e-10;7!UBERON:0003126;7.47e-10;7!UBERON:0001005;7.47e-10;7!UBERON:0005178;4.85e-08;34!UBERON:0002224;4.85e-08;34!UBERON:0000065;5.48e-08;44!UBERON:0000072;2.30e-07;37!UBERON:0005181;6.28e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.43e-34;4!UBERON:0004815;8.09e-22;3!UBERON:0002031;8.09e-22;3!UBERON:0007196;6.06e-17;15!UBERON:0001558;6.06e-17;15!UBERON:0002185;1.68e-13;5!UBERON:0000485;6.55e-10;7!UBERON:0003126;7.47e-10;7!UBERON:0001005;7.47e-10;7!UBERON:0005178;4.85e-08;34!UBERON:0002224;4.85e-08;34!UBERON:0000065;5.48e-08;44!UBERON:0000072;2.30e-07;37!UBERON:0005181;6.28e-07;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.35e-34,4;UBERON:0004340,1.35e-34,4;UBERON:0004815,8.53e-22,3;UBERON:0002031,8.53e-22,3;UBERON:0003124,4.19e-20,7;UBERON:0007196,6.06e-17,15;UBERON:0001558,6.06e-17,15;UBERON:0002185,1.74e-13,5;UBERON:0005631,2.24e-10,14;UBERON:0000158,2.24e-10,14;UBERON:0003126,7.31e-10,7;UBERON:0001005,7.31e-10,7;UBERON:0000485,6.77e-08,9;UBERON:0005178,1.25e-07,34;UBERON:0002224,1.25e-07,34;UBERON:0005181,2.04e-07,35;UBERON:0000065,3.43e-07,54;UBERON:0000995,4.23e-07,21;UBERON:0004119,6.58e-07,160;UBERON:0000925,6.58e-07,160;UBERON:0006595,6.58e-07,160;UBERON:0008947,7.59e-07,38;UBERON:0003258,7.59e-07,38;UBERON:0005795,8.43e-07,22;UBERON:0003975,8.43e-07,22 | |||
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| ||
|short_description=p@chr14:75033780..75033781,+ | |short_description=p@chr14:75033780..75033781,+ | ||
}} | }} |
Latest revision as of 22:42, 24 July 2015
Short description: | p@chr14:75033780..75033781, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75033780..75033781, + |
Coexpression cluster: | C1399_Bronchial_Tracheal_bronchial_Lymphatic_salivary_Small_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.74e-46 | 3 |
respiratory epithelial cell | 8.71e-30 | 13 |
epithelial cell of tracheobronchial tree | 5.75e-28 | 9 |
epithelial cell of lower respiratory tract | 5.75e-28 | 9 |
bronchial epithelial cell | 8.53e-22 | 3 |
duct epithelial cell | 1.05e-21 | 3 |
branched duct epithelial cell | 1.05e-21 | 3 |
tracheal epithelial cell | 1.05e-21 | 3 |
tracheoblast | 1.05e-21 | 3 |
keratinocyte | 6.32e-13 | 5 |
stratified squamous epithelial cell | 6.24e-11 | 6 |
keratin accumulating cell | 6.24e-11 | 6 |
stratified epithelial cell | 6.24e-11 | 6 |
keratinizing barrier epithelial cell | 6.24e-11 | 6 |
epithelial fate stem cell | 6.24e-11 | 6 |
stratified epithelial stem cell | 6.24e-11 | 6 |
surface ectodermal cell | 6.24e-11 | 6 |
endo-epithelial cell | 2.92e-09 | 42 |
extraembryonic cell | 8.58e-08 | 19 |
epithelial cell | 1.37e-07 | 253 |
epidermal cell | 1.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.35e-34 | 4 |
allantois | 1.35e-34 | 4 |
lower respiratory tract epithelium | 8.53e-22 | 3 |
epithelium of bronchus | 8.53e-22 | 3 |
chorion | 4.19e-20 | 7 |
tracheobronchial tree | 6.06e-17 | 15 |
lower respiratory tract | 6.06e-17 | 15 |
bronchus | 1.74e-13 | 5 |
extraembryonic membrane | 2.24e-10 | 14 |
membranous layer | 2.24e-10 | 14 |
trachea | 7.31e-10 | 7 |
respiratory airway | 7.31e-10 | 7 |
simple columnar epithelium | 6.77e-08 | 9 |
thoracic cavity element | 1.25e-07 | 34 |
thoracic cavity | 1.25e-07 | 34 |
thoracic segment organ | 2.04e-07 | 35 |
respiratory tract | 3.43e-07 | 54 |
uterus | 4.23e-07 | 21 |
endoderm-derived structure | 6.58e-07 | 160 |
endoderm | 6.58e-07 | 160 |
presumptive endoderm | 6.58e-07 | 160 |
respiratory primordium | 7.59e-07 | 38 |
endoderm of foregut | 7.59e-07 | 38 |
embryonic uterus | 8.43e-07 | 22 |
internal female genitalia | 8.43e-07 | 22 |