FFCP PHASE1:Hg19::chr14:89044406..89044416,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:89044406..89044416,+ to FFCP PHASE1:Hg19::chr14:89044406..89044416,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:89044406..89044416,+ | |||
|description=CAGE_peak_at_chr14:89044406..89044416,+ | |||
|id=chr14:89044406..89044416,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.05e-29;1!UBERON:0003852;2.05e-29;1!UBERON:0005062;2.18e-08;4!UBERON:0007284;2.18e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;2.05e-29;1!UBERON:0008193;2.05e-29;1!UBERON:0010912;2.05e-29;1!UBERON:0002514;2.05e-29;1!UBERON:0003457;2.05e-29;1!UBERON:0008907;2.05e-29;1!UBERON:0008001;2.05e-29;1!UBERON:0007213;2.05e-29;1!UBERON:0009891;2.05e-29;1!UBERON:0007914;2.05e-29;1!UBERON:0007375;2.05e-29;1!UBERON:0003323;2.05e-29;1!UBERON:0010258;2.05e-29;1!UBERON:0005253;2.05e-29;1!UBERON:0007842;2.05e-29;1!UBERON:0002397;2.05e-29;1!UBERON:0003113;2.05e-29;1!UBERON:0003277;2.05e-29;1!UBERON:0001709;2.05e-29;1!UBERON:0002244;2.05e-29;1!UBERON:0005620;2.05e-29;1!UBERON:0010364;2.05e-29;1!UBERON:0004288;2.05e-29;1!UBERON:0004089;1.91e-15;2!UBERON:0001708;2.18e-08;4!UBERON:0008895;2.18e-08;4!UBERON:0011159;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,3.16e-29,1;UBERON:0008193,3.16e-29,1;UBERON:0010912,3.16e-29,1;UBERON:0002514,3.16e-29,1;UBERON:0003457,3.16e-29,1;UBERON:0008907,3.16e-29,1;UBERON:0008001,3.16e-29,1;UBERON:0007213,3.16e-29,1;UBERON:0009891,3.16e-29,1;UBERON:0007914,3.16e-29,1;UBERON:0009292,3.16e-29,1;UBERON:0003099,3.16e-29,1;UBERON:0007375,3.16e-29,1;UBERON:0003323,3.16e-29,1;UBERON:0010258,3.16e-29,1;UBERON:0007842,3.16e-29,1;UBERON:0009494,3.16e-29,1;UBERON:0010042,3.16e-29,1;UBERON:0010045,3.16e-29,1;UBERON:0010259,3.16e-29,1;UBERON:0010359,3.16e-29,1;UBERON:0009526,3.16e-29,1;UBERON:0002397,3.16e-29,1;UBERON:0003113,3.16e-29,1;UBERON:0003277,3.16e-29,1;UBERON:0001709,3.16e-29,1;UBERON:0004066,3.16e-29,1;UBERON:0002244,3.16e-29,1;UBERON:0005620,3.16e-29,1;UBERON:0004362,3.16e-29,1;UBERON:0010364,3.16e-29,1;UBERON:0010046,3.16e-29,1;UBERON:0005868,3.16e-29,1;UBERON:0007238,3.16e-29,1;UBERON:0004288,3.16e-29,1;UBERON:0004068,3.16e-29,1;UBERON:0010334,3.16e-29,1;UBERON:0003852,3.16e-29,1;UBERON:0010253,3.16e-29,1;UBERON:0005253,2.37e-15,2;UBERON:0004089,2.37e-15,2;UBERON:0001708,2.43e-08,4;UBERON:0008895,2.43e-08,4;UBERON:0011159,6.39e-07,5 | |||
|phase1_expression=0.726713517082227,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0.514703430895577,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.120859449591622,0.601519410909855,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.41254749960294,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0.482385754501632,0,0.442317039724898,0,0,0,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.134802265961354,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.274083849293502,0,0,0,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0.514784993585894,0.14405479798815,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0.795229689809303,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.511164065356265,0,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0,0,0.276697269872462,0,0.303298235083296,0.856396000634902,0.470531639396343,0.468334905806882,0.434763085832475,0.298509605773748,0.233713309847224,0,0.378806010550178,0,0.889811221596536,0,0.302461847526478,0,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0.813741466409323,0.181848659202559,0.214821114084977,0.928067519756987,0.796191777397232,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0.265729680626726,0,0.655219697692825,0.491545817507439,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,1.05802783107205,0.6124909547064,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.496211178389294,0.527613733078862,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0.9555033757741,0.214429632529969,0.316027223465453,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0.339854229375634,0,0.0644578879735772,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.101988829741982,0,0.18378979906969,0.250707539292375,2.27336094654718,0.267964130156178,0,0.103432995861895,0,0.714193294391221,0.0645889098360061,0,0.224263725161227,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0.122241444182866,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0.726713517082227,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0.514703430895577,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.120859449591622,0.601519410909855,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.41254749960294,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0.482385754501632,0,0.442317039724898,0,0,0,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.134802265961354,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.274083849293502,0,0,0,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0.514784993585894,0.14405479798815,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0.795229689809303,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.511164065356265,0,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0,0,0.276697269872462,0,0.303298235083296,0.856396000634902,0.470531639396343,0.468334905806882,0.434763085832475,0.298509605773748,0.233713309847224,0,0.378806010550178,0,0.889811221596536,0,0.302461847526478,0,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0.813741466409323,0.181848659202559,0.214821114084977,0.928067519756987,0.796191777397232,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0.265729680626726,0,0.655219697692825,0.491545817507439,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,1.05802783107205,0.6124909547064,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.496211178389294,0.527613733078862,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0.9555033757741,0.214429632529969,0.316027223465453,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0.339854229375634,0,0.0644578879735772,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.101988829741982,0,0.18378979906969,0.250707539292375,2.27336094654718,0.267964130156178,0,0.103432995861895,0,0.714193294391221,0.0645889098360061,0,0.224263725161227,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0.122241444182866,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p@chr14:89044406..89044416,+ | |||
}} | }} |
Latest revision as of 23:24, 24 July 2015
Short description: | p@chr14:89044406..89044416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:89044406..89044416, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.04e-07 | 5 |