FFCP PHASE1:Hg19::chr15:28413731..28413765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:28413731..28413765,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr15:28413731..28413765,- | |description=CAGE_peak_at_chr15:28413731..28413765,- | ||
|id=chr15:28413731..28413765,- | |id=chr15:28413731..28413765,- | ||
|ontology_enrichment_celltype=CL:0000148!9.72e-11!10;CL:0000541!9.72e-11!10;CL:0000147!4.26e-07!14 | |ontology_enrichment_celltype=CL:0000148!9.72e-11!10;CL:0000541!9.72e-11!10;CL:0000147!4.26e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.81e-28;10!CL:0000147;6.11e-20;14!CL:0002567;9.63e-19;3!CL:0002595;3.34e-18;5!CL:0000710;1.12e-13;20!CL:0002593;2.10e-12;2!CL:0000075;6.95e-10;27!CL:0000135;3.02e-08;3!CL:0000388;3.02e-08;3!CL:0002566;3.27e-07;1!CL:0002077;6.76e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.94e-28,10;CL:0000541,2.94e-28,10;CL:0000147,6.29e-20,14;CL:0002567,9.65e-19,3;CL:0002595,2.68e-18,5;CL:0000710,1.14e-13,20;CL:0002593,2.35e-12,2;CL:0000075,7.05e-10,27;CL:0000135,3.13e-08,3;CL:0000388,3.13e-08,3;CL:0002077,1.20e-07,34;CL:0002566,3.36e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.52e-07!31 | |ontology_enrichment_disease=DOID:8692!3.52e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.74e-10;31!DOID:1240;1.71e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.58e-10,31;DOID:1240,4.02e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.11e-17!57;UBERON:0005068!3.11e-17!57;UBERON:0006241!3.11e-17!57;UBERON:0007135!3.11e-17!57;UBERON:0007023!7.11e-16!115;UBERON:0002780!1.40e-14!41;UBERON:0001890!1.40e-14!41;UBERON:0006240!1.40e-14!41;UBERON:0003080!4.52e-14!42;UBERON:0002616!4.88e-14!59;UBERON:0001893!9.13e-14!34;UBERON:0003075!1.27e-13!86;UBERON:0007284!1.27e-13!86;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0002791!5.19e-13!33;UBERON:0002346!1.48e-12!90;UBERON:0001017!2.43e-12!82;UBERON:0005743!2.79e-12!86;UBERON:0000073!7.38e-12!94;UBERON:0001016!7.38e-12!94;UBERON:0001869!1.02e-11!32;UBERON:0000955!2.33e-11!69;UBERON:0006238!2.33e-11!69;UBERON:0003056!2.22e-09!61;UBERON:0000956!1.21e-08!25;UBERON:0000203!1.21e-08!25;UBERON:0002308!9.01e-07!9;UBERON:0000125!9.01e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!3.11e-17!57;UBERON:0005068!3.11e-17!57;UBERON:0006241!3.11e-17!57;UBERON:0007135!3.11e-17!57;UBERON:0007023!7.11e-16!115;UBERON:0002780!1.40e-14!41;UBERON:0001890!1.40e-14!41;UBERON:0006240!1.40e-14!41;UBERON:0003080!4.52e-14!42;UBERON:0002616!4.88e-14!59;UBERON:0001893!9.13e-14!34;UBERON:0003075!1.27e-13!86;UBERON:0007284!1.27e-13!86;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0002791!5.19e-13!33;UBERON:0002346!1.48e-12!90;UBERON:0001017!2.43e-12!82;UBERON:0005743!2.79e-12!86;UBERON:0000073!7.38e-12!94;UBERON:0001016!7.38e-12!94;UBERON:0001869!1.02e-11!32;UBERON:0000955!2.33e-11!69;UBERON:0006238!2.33e-11!69;UBERON:0003056!2.22e-09!61;UBERON:0000956!1.21e-08!25;UBERON:0000203!1.21e-08!25;UBERON:0002308!9.01e-07!9;UBERON:0000125!9.01e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.34e-18;5!UBERON:0001533;3.34e-18;5!UBERON:0003513;4.74e-13;7!UBERON:0002456;2.10e-12;2!UBERON:0007846;3.02e-08;3!UBERON:0000043;3.02e-08;3!UBERON:0007845;3.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.68e-18,5;UBERON:0001533,2.68e-18,5;UBERON:0003513,4.05e-13,7;UBERON:0002456,2.35e-12,2;UBERON:0007846,3.13e-08,3;UBERON:0000043,3.13e-08,3;UBERON:0007845,3.13e-08,3;UBERON:0000941,9.51e-07,1;UBERON:0001785,9.51e-07,1;UBERON:0002464,9.51e-07,1;UBERON:0004904,9.51e-07,1;UBERON:0001021,9.51e-07,1;UBERON:0003902,9.51e-07,1;UBERON:0005425,9.51e-07,1 | |||
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| ||
|short_description=p@chr15:28413731..28413765,- | |short_description=p@chr15:28413731..28413765,- | ||
}} | }} |
Latest revision as of 00:35, 25 July 2015
Short description: | p@chr15:28413731..28413765, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:28413731..28413765, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.94e-28 | 10 |
melanoblast | 2.94e-28 | 10 |
pigment cell | 6.29e-20 | 14 |
light melanocyte | 9.65e-19 | 3 |
smooth muscle cell of the subclavian artery | 2.68e-18 | 5 |
neurecto-epithelial cell | 1.14e-13 | 20 |
smooth muscle cell of the internal thoracic artery | 2.35e-12 | 2 |
columnar/cuboidal epithelial cell | 7.05e-10 | 27 |
fibrocyte | 3.13e-08 | 3 |
tendon cell | 3.13e-08 | 3 |
ecto-epithelial cell | 1.20e-07 | 34 |
dark melanocyte | 3.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.68e-18 | 5 |
subclavian artery | 2.68e-18 | 5 |
trunk blood vessel | 4.05e-13 | 7 |
internal thoracic artery | 2.35e-12 | 2 |
dense regular connective tissue | 3.13e-08 | 3 |
tendon | 3.13e-08 | 3 |
regular connective tissue | 3.13e-08 | 3 |
cranial nerve II | 9.51e-07 | 1 |
cranial nerve | 9.51e-07 | 1 |
nerve trunk | 9.51e-07 | 1 |
nerve connecting eye with brain | 9.51e-07 | 1 |
nerve | 9.51e-07 | 1 |
retinal neural layer | 9.51e-07 | 1 |
presumptive neural retina | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.58e-10 | 31 |
leukemia | 4.02e-08 | 39 |