FFCP PHASE1:Hg19::chr15:33021589..33021598,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33021589..33021598,+ | |||
|coexpression_cluster_id=C2107 | |||
|description=CAGE_peak_at_chr15:33021589..33021598,+ | |description=CAGE_peak_at_chr15:33021589..33021598,+ | ||
|id=chr15:33021589..33021598,+ | |id=chr15:33021589..33021598,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.78e-25!75;CL:0002620!1.58e-20!23;CL:0000055!1.76e-13!180;CL:0002334!2.18e-11!12;CL:0000135!3.98e-10!3;CL:0000386!3.98e-10!3;CL:0000388!3.98e-10!3;CL:1000306!9.38e-08!4;CL:0002547!9.38e-08!4;CL:0002617!4.59e-07!2;CL:0000048!5.61e-07!430;CL:0000134!5.62e-07!358;CL:0000569!7.59e-07!4;CL:0000011!7.59e-07!4 | |ontology_enrichment_celltype=CL:0000057!3.78e-25!75;CL:0002620!1.58e-20!23;CL:0000055!1.76e-13!180;CL:0002334!2.18e-11!12;CL:0000135!3.98e-10!3;CL:0000386!3.98e-10!3;CL:0000388!3.98e-10!3;CL:1000306!9.38e-08!4;CL:0002547!9.38e-08!4;CL:0002617!4.59e-07!2;CL:0000048!5.61e-07!430;CL:0000134!5.62e-07!358;CL:0000569!7.59e-07!4;CL:0000011!7.59e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.07e-28;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.66e-28,23;CL:0000057,2.13e-11,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.25e-19;1!UBERON:0003852;3.25e-19;1 | |||
|ontology_enrichment_disease=DOID:17!1.31e-15!5;DOID:450!1.31e-15!5;DOID:66!1.31e-15!5;DOID:423!1.31e-15!5;DOID:0080000!1.31e-15!5;DOID:11722!1.31e-15!5 | |ontology_enrichment_disease=DOID:17!1.31e-15!5;DOID:450!1.31e-15!5;DOID:66!1.31e-15!5;DOID:423!1.31e-15!5;DOID:0080000!1.31e-15!5;DOID:11722!1.31e-15!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.88e-15;5!DOID:450;1.88e-15;5!DOID:66;1.88e-15;5!DOID:423;1.88e-15;5!DOID:0080000;1.88e-15;5!DOID:11722;1.88e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.88e-15,5;DOID:450,1.88e-15,5;DOID:66,1.88e-15,5;DOID:423,1.88e-15,5;DOID:0080000,1.88e-15,5;DOID:11722,1.88e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.94e-12!40;UBERON:0002199!4.02e-12!45;UBERON:0002416!4.02e-12!45;UBERON:0000043!3.98e-10!3;UBERON:0000415!9.38e-08!4;UBERON:0007240!9.38e-08!4;UBERON:0005742!9.38e-08!4;UBERON:0005734!9.38e-08!4;UBERON:0004664!9.38e-08!4;UBERON:0004663!9.38e-08!4;UBERON:0003102!4.39e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;3.25e-19;1!UBERON:0008193;3.25e-19;1!UBERON:0010912;3.25e-19;1!UBERON:0002514;3.25e-19;1!UBERON:0003457;3.25e-19;1!UBERON:0008907;3.25e-19;1!UBERON:0008001;3.25e-19;1!UBERON:0007213;3.25e-19;1!UBERON:0009891;3.25e-19;1!UBERON:0007914;3.25e-19;1!UBERON:0007375;3.25e-19;1!UBERON:0003323;3.25e-19;1!UBERON:0010258;3.25e-19;1!UBERON:0005253;3.25e-19;1!UBERON:0007842;3.25e-19;1!UBERON:0002397;3.25e-19;1!UBERON:0003113;3.25e-19;1!UBERON:0003277;3.25e-19;1!UBERON:0001709;3.25e-19;1!UBERON:0002244;3.25e-19;1!UBERON:0005620;3.25e-19;1!UBERON:0010364;3.25e-19;1!UBERON:0004288;3.25e-19;1!UBERON:0002097;2.73e-12;41!UBERON:0002199;1.23e-10;46!UBERON:0002416;1.23e-10;46!UBERON:0004089;2.72e-10;2!UBERON:0003102;2.96e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,5.62e-19,1;UBERON:0008193,5.62e-19,1;UBERON:0010912,5.62e-19,1;UBERON:0002514,5.62e-19,1;UBERON:0003457,5.62e-19,1;UBERON:0008907,5.62e-19,1;UBERON:0008001,5.62e-19,1;UBERON:0007213,5.62e-19,1;UBERON:0009891,5.62e-19,1;UBERON:0007914,5.62e-19,1;UBERON:0009292,5.62e-19,1;UBERON:0003099,5.62e-19,1;UBERON:0007375,5.62e-19,1;UBERON:0003323,5.62e-19,1;UBERON:0010258,5.62e-19,1;UBERON:0007842,5.62e-19,1;UBERON:0009494,5.62e-19,1;UBERON:0010042,5.62e-19,1;UBERON:0010045,5.62e-19,1;UBERON:0010259,5.62e-19,1;UBERON:0010359,5.62e-19,1;UBERON:0009526,5.62e-19,1;UBERON:0002397,5.62e-19,1;UBERON:0003113,5.62e-19,1;UBERON:0003277,5.62e-19,1;UBERON:0001709,5.62e-19,1;UBERON:0004066,5.62e-19,1;UBERON:0002244,5.62e-19,1;UBERON:0005620,5.62e-19,1;UBERON:0004362,5.62e-19,1;UBERON:0010364,5.62e-19,1;UBERON:0010046,5.62e-19,1;UBERON:0005868,5.62e-19,1;UBERON:0007238,5.62e-19,1;UBERON:0004288,5.62e-19,1;UBERON:0004068,5.62e-19,1;UBERON:0010334,5.62e-19,1;UBERON:0003852,5.62e-19,1;UBERON:0010253,5.62e-19,1;UBERON:0002097,7.25e-16,41;UBERON:0002199,3.93e-14,46;UBERON:0002416,3.93e-14,46;UBERON:0005253,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0003102,1.18e-08,99 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19168262731897,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0,0,2.51145489964407,0.427114777637135,0.423863802319124,1.20036438433761,0.103052529238439,2.06112432036503,0.744467425326359,1.85653965465393,0,5.3011092591264,0.184099797284599,0,2.84007674013291,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42743191037729,0.473107245101804,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.561320188866147,0.384417447767103,0,0.804269605718038,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,1.85613503951397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19168262731897,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0,0,2.51145489964407,0.427114777637135,0.423863802319124,1.20036438433761,0.103052529238439,2.06112432036503,0.744467425326359,1.85653965465393,0,5.3011092591264,0.184099797284599,0,2.84007674013291,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42743191037729,0.473107245101804,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.561320188866147,0.384417447767103,0,0.804269605718038,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,1.85613503951397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:33021589..33021598,+ | |short_description=p@chr15:33021589..33021598,+ | ||
}} | }} |
Latest revision as of 00:47, 25 July 2015
Short description: | p@chr15:33021589..33021598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33021589..33021598, + |
Coexpression cluster: | C2107_Fibroblast_Preadipocyte_mesenchymal_Chondrocyte_glioblastoma_Saos2_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.66e-28 | 23 |
fibroblast | 2.13e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.88e-15 | 5 |
myotonic disease | 1.88e-15 | 5 |
muscle tissue disease | 1.88e-15 | 5 |
myopathy | 1.88e-15 | 5 |
muscular disease | 1.88e-15 | 5 |
myotonic dystrophy | 1.88e-15 | 5 |